Aput011778.1
Basic Information
- Insect
- Agrotis puta
- Gene Symbol
- clz9
- Assembly
- GCA_943137145.2
- Location
- CALPBO020000489.1:1307749-1309333[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-10 3.4e-07 30.1 0.0 2 43 17 59 16 60 0.93 2 2 9.2 5.9e+03 -2.6 0.1 24 31 323 330 323 331 0.79
Sequence Information
- Coding Sequence
- atggtcagaaattacaagaaaaagagaactaggagtggagaggtggatgaacaggcaatgttaaaagctatcgatgaagttttggaaaacaaactttctttacgaaaatcagcagccaaatatggagttaATGCACAAACACTGCAAAGCCAGTGTTCTAAGATGCACTATGGACTGACATGTATCCAAGTTAAAAAACTTGCGTATGAATTTGCTAAGGCCAATGATATCAAACATCTTGCAAGTTGGGATAATAATGAAATGGCAGGAGCAGACTGGTTAGCAAGTTTCCGAAAACGAAATAAAAATTTAAGTTTACGCAAACCTGAAAATACTAGCGCTGCCAGATCGTTCGGTTTCAACAAATCGGCAGTGAATGATTTCTTCCAGAACCTGGAGAATATATACCGCAAACATAATTTTACTGCCGATCGGATTTTCAACTACGACGAGTCGGGTATATCAACTGTTTTGAGTACACCAATAATTTTTGCTGACAAGAGTCAAAAGCAGGTTGGTCAAATAGTGTCTGCCGAAAGAGGAGAACAGGTCACATTTCGTGGCATTGTTTCAGCGAGTGGAAATACCATACCGCCCTTATTCATCTTCCCTCGGGTTCATTATAAGGACCAATTCTTAGAAGGTGCTCCAGAAGGCTCCCTAGGTGTAGCTACGAGAAGTGGTTGGATAAATTCAAATATTTTTGTTGATGTCTTAAAGCATATACAAAAACACACGTTATGTTCGAAAGAAAATCCAATGTTACTTTTATTTGACAACCATGAAAGTCACATTTCTATAGATGCAATCAACTACTGCCGTGAAAATGGAATTGTGTGCCTTTCCTTTCCCCCTCACACAACTCACCGCCTTCAGCCACTAGATGTTGGAGTATTTGGACCATTTAAATCAAAATTAAAAATAGCATTCAATGACTGGCACGTTTGCAACCCAGGAAAGACACTTAAATATTATAATATCCCAAAACTCACCAAAATACCTTATTTGGAGTCATTCAATGGCAGGAATATCACAAGTGCTTATGAAAAGACCGGAATATGGCCTTTTAATAAGTTGATTTTCAATGACGATGACTTTGCGCCCGTTCAGGTGTATCACTCAAATCCTGTAACAAATCCTAATGAAAGCACTGGTGGTAACGAGCTTACTACAGTTAGTGCTGAACTTGGGGATGTTCCTGCTCGAACACCACCGACTTTGTCAAGAGATGTCTCGCCTTCACTGCTTTCACAAGTACAGGTTAATTTTGATAACCCTGCTCCATCTACGTCCAAAGTATTGAAGACACCAGAAATGATAAGACCTTTTCCGAAAGTTCAAAAATGCACGCAGACAAAAAAGGGGCGATCACTTGGAAAATCAAGAATTTACACGGACACTCCTGAAAAGACTAGAATTAAAGAATTGGAAAAAAATAAAGAGATGAAGTATATGAATTAG
- Protein Sequence
- MVRNYKKKRTRSGEVDEQAMLKAIDEVLENKLSLRKSAAKYGVNAQTLQSQCSKMHYGLTCIQVKKLAYEFAKANDIKHLASWDNNEMAGADWLASFRKRNKNLSLRKPENTSAARSFGFNKSAVNDFFQNLENIYRKHNFTADRIFNYDESGISTVLSTPIIFADKSQKQVGQIVSAERGEQVTFRGIVSASGNTIPPLFIFPRVHYKDQFLEGAPEGSLGVATRSGWINSNIFVDVLKHIQKHTLCSKENPMLLLFDNHESHISIDAINYCRENGIVCLSFPPHTTHRLQPLDVGVFGPFKSKLKIAFNDWHVCNPGKTLKYYNIPKLTKIPYLESFNGRNITSAYEKTGIWPFNKLIFNDDDFAPVQVYHSNPVTNPNESTGGNELTTVSAELGDVPARTPPTLSRDVSPSLLSQVQVNFDNPAPSTSKVLKTPEMIRPFPKVQKCTQTKKGRSLGKSRIYTDTPEKTRIKELEKNKEMKYMN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01246787;
- 90% Identity
- -
- 80% Identity
- -