Aips021981.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrotis ipsilon
Gene Symbol
nfxl1
Assembly
GCA_028554685.1
Location
CM052976.1:11988015-11990495[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 3.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.011 1.9e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 20 3.1e-07 0.0056 17.6 15.9 3 19 186 202 185 202 0.95
4 20 1.6 2.8e+04 -3.8 0.6 6 10 227 231 226 231 0.78
5 20 1.4e-07 0.0024 18.8 10.6 3 19 239 255 237 255 0.91
6 20 1.7 3e+04 -3.9 1.9 6 10 280 284 279 284 0.83
7 20 2e-08 0.00035 21.5 11.9 1 19 290 308 290 308 0.99
8 20 4.4e-06 0.078 14.0 19.0 3 19 345 361 337 361 0.86
9 20 1.2 2.2e+04 -3.4 0.4 7 11 365 369 365 369 0.84
10 20 2 3.6e+04 -5.3 2.2 5 10 384 389 384 389 0.88
11 20 6.7e-05 1.2 10.2 20.3 1 18 395 412 395 413 0.97
12 20 4.5e-10 8e-06 26.7 14.0 1 19 422 440 422 440 0.99
13 20 0.00035 6.3 7.9 4.9 9 19 488 498 486 498 0.89
14 20 0.00022 4 8.5 7.4 1 12 508 518 508 518 0.96
15 20 0.35 6.2e+03 -1.7 3.6 14 18 547 551 547 552 0.87
16 20 0.28 5e+03 -1.4 0.4 8 12 568 572 567 579 0.79
17 20 5.3e-06 0.095 13.7 4.8 1 11 588 598 588 599 0.97
18 20 0.00013 2.2 9.3 13.2 4 18 630 645 628 646 0.86
19 20 2.1e-06 0.037 15.0 10.8 1 18 687 705 687 706 0.89
20 20 2 3.6e+04 -4.5 1.1 6 10 736 740 736 741 0.83

Sequence Information

Coding Sequence
ATGGCACGCAGATACAGAGATGCAGCTGCAAAATTGCAGCAAAACGTCCAGAAACATCTAAAAGACATGAAGGAAATGTCGTCTTCCGAAGATGAGGAACCTTGCGAGTCCAGCGTCTTGGAGACCATGTTCCAGAGCTACTGGCGTGGCGGAGGTGACACTCAAATGCTTAACAGGACCAAAAACCTCCTTGAAGAAGCCATCAGTGGCCGCTCAGTTACGTGTCTTATATGCATAGGGTCGATCAAAAAATCTCACGCAATTTGGACTTGTGACCATTGTTTTTCATACTTCCATCTATCTTGCATTCAAAAATGGGCAAACGACAGCATTAGCTTACGTAGCGAAGAAAGTACGGGTCCGATAGCTGTAATAAAGCATCAGAAAATTGAATGGTGCTGCCCCAAGTGCCGAAATTCATATTCCAAAGAAGAAATACCTCGGAAATATCGCTGCTTTTGCGGCCAAACTGATGACCCGCCACAACATCCGTGGCTCATTCCTCATACTTGTGGTGAAGTCTGTGGGAAGAGGCTATCTACTGGTGATAATTGTAAACACAAGTGCTTGCTGTTATGCCACCCTGGTCCTTGTCCCCCGTGTCCTCAAACTGTTAACGGGATTTGTTATTGTGAGAAAGAACGCAAGAGAGTGAGATGCAGCGCTGCTAAATGGTCTTGTGGCCAAGTTTGTAAGAAAACTCTTCTATGTAAGACTCATTATTGTGAAAATGTTTGCCATGCTGGTGACTGCCCTGAATGCACCTACACAAGTATTCAACCATGTCAATGTGGCTCTGAGAAAGCTAAAAGACCATGTAATGATCCATTCTGGCAGTGTAAGAAGCCatgtaacaaattattttcatgtgGCTATCATAAATGTGACAGAATCTGTCATTCTGGCACCTGTGGTGACTGTCCTAACTCTGGCATGTTATCATGTCCCTGCGGTGCCAACCAGCGCTTTGTTCAGTGTCCAGATGTTATGGAAACCTGTTTGGGTACATGTGGGAAGAGGCATGAAGATTGTGAACACAAGTGTCCAGAGAAGTGCCACAATGGCAACTGCCCACCATGCCAAGTACTAATTGAGAAGAAATGCCACTGCTCAACACATACTAGGTCTCTACCGTGTAGCAAGGACTTCAAATGTGAGACTAAATGTAGAGGCATCAGACCGTGCGGCAAACATGGATGTGGAAGAAAATGCTGCAATGGGAACTGCCCTCCTTGTGAGAAAACATGTGACAAAAATCTCCATTGTGGTAGACATAAGTGCACAAATATCTGTCATCGTGGACCATGCTACCCGTGCCCTCTAGAATCGAAAGTAACTTGCAGATGTAAAGAAACTTTTGTCCGAGTCCCCTGTGGACGTGAACGTCAGACAAAACcaccaaaatgtaatttacCTTGCAAAATAAGGTACAAATGTGGTCATagtgaagaaaataaacattccTGTCATTTTGGTGATTGTCCATCCTGCAAGGCAATTTGTGACAAGCAGAATCCTAAGTGTGGTCATAATTGCAAATCAGTGTGTCATGAATATGTGCCAGTGCTGTTCAAACAAGTGGAAAAACCTGCCACCCCATGGGAAGTGCAGCCTCCAAAGACTAAGATCATGACCTTGGACTGTCCACCATGTGACACACCAGTATCAATGATTTGTTTTGGAGAACATGAAACGGATCTACAACCTTGCCACTCAGCTTCTCGGAGGCCTTGTGGAAGAGAATGTGGAAAACCGTTGGCTTGTGGCAACCACAAGTGCTCCTTACTCTGTCATCTTTATAGCCCTCTTCCTGAGTATCCAAATGTGCCTTCCAGTTGTAGGCAATGTAACAGAGAATGTTCTGTTCCACGTCCTGAAAAATGTGCTCACAAATGTTCCATAAAGGCTTGTCATCCTGGACCATGTCGGCCATGTGAGATACTTGAACGTTTAGCATGTCATTGTGGAGTAACTGAGATTTATTTACGCTGTCGAGAACTGTCCACAGCTACTGAAGAGATGTTATCGTGTAAGCAACAATGTCCTAAGAACTTGGAGTGTGGTCACCGCTGCCGGAACATTTGTCACTCAGGAGCTTGCGGCAACCAAGTATGCACTAAGAAGACTAAAGTGCATTGTCCATGTGGTAATATAAGGAAGGAGGCTCCATGCAATTTAGTTAGAAACGGAGAAGCAAAGATAATGTGTGACCAAACTTGTGAAGCCAAGAAAGCTGCAGCTAAAATAGAACAAGAGAAAGAGAAGCAGAGGTTGAAAGAgttagaagaagaaaagaatCGTAAAGAGTTAGCAGAGTATGAGTGGAAATTAAGTGGTAAGAAGAAGAAATATAAGGAGAAGAAGATGGTAGTAGATAAAGATGACCGTGGATTCCTAAAGAGATATTGGGTACCAATGTCATCATTCCTAGTTATGATGCTAGCttctatttattatatattttatgtagaatTAGAATAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLKDMKEMSSSEDEEPCESSVLETMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCDHCFSYFHLSCIQKWANDSISLRSEESTGPIAVIKHQKIEWCCPKCRNSYSKEEIPRKYRCFCGQTDDPPQHPWLIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCEKERKRVRCSAAKWSCGQVCKKTLLCKTHYCENVCHAGDCPECTYTSIQPCQCGSEKAKRPCNDPFWQCKKPCNKLFSCGYHKCDRICHSGTCGDCPNSGMLSCPCGANQRFVQCPDVMETCLGTCGKRHEDCEHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRSLPCSKDFKCETKCRGIRPCGKHGCGRKCCNGNCPPCEKTCDKNLHCGRHKCTNICHRGPCYPCPLESKVTCRCKETFVRVPCGRERQTKPPKCNLPCKIRYKCGHSEENKHSCHFGDCPSCKAICDKQNPKCGHNCKSVCHEYVPVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVSMICFGEHETDLQPCHSASRRPCGRECGKPLACGNHKCSLLCHLYSPLPEYPNVPSSCRQCNRECSVPRPEKCAHKCSIKACHPGPCRPCEILERLACHCGVTEIYLRCRELSTATEEMLSCKQQCPKNLECGHRCRNICHSGACGNQVCTKKTKVHCPCGNIRKEAPCNLVRNGEAKIMCDQTCEAKKAAAKIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMVVDKDDRGFLKRYWVPMSSFLVMMLASIYYIFYVELE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01440670;
80% Identity
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