Aips020905.2
Basic Information
- Insect
- Agrotis ipsilon
- Gene Symbol
- SMARCC2
- Assembly
- GCA_028554685.1
- Location
- CM052975.1:7402070-7419890[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-15 1.6e-11 45.0 0.1 4 44 517 557 514 559 0.95
Sequence Information
- Coding Sequence
- atGAAAGTATTCATGGACATGAAACCGGGCGGGTCCCTGTGCACGATGCTAGCCACCATGTTCCGTTTCAAGGCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCCTCCCGTAAGGACCTGAACGTGCAGATGATGATGGAGATCGAGTCGGCTCTATCCAGCGCTGACGTCATCCGCGCGCCCTGCGTCTTCATACGGCCAGAGGTTGATAAGGCGACCGCTAACAAAGTCAAGGACATTGTTGTCAATCATCAGGGAGAGATTTGCGAAGATGAAGAGGAAGCGACGCACATAGTGTACCCAACAGTGGACCCGCTGGAGGAGGAGTACGCGCGGCCGGTGTTCCGACGTGCCAACCACGTGCTGGTGCACTGGTACTACCTGCCCGACAGCCACGACACCTGGGCACAGGCCGACTTACCGGTGGACGTACCCGAGACAGTGAGCTGGGAGTGCACTCGCTCGGAGCCGTGGCGTGTGTCGGCGTCGTGGGCGCTGGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAAGACTACGAGCTCGACGCCAACGGCAAGAAGAAGGTCCACAAACTGCGCCTATCAGTGGACGATCTTATCCCGGGAGGGGAACCCTCTAGCAAGTCTAAGAAGGGCAGCAAGAGGAAGCGTTCGCCCTCTCCACCGCCACAGAAACACGGCAAGAGAAAGAGTCGTATCACCAAACGTCGAGAAAATGATGTGGATGAGGAAGAGGACAACGCTTCCCGAGACAACACTGATGCTGCGCCCACGCCGGAGAGCGAACGACCTGCTGAACcggcggcggcgccccCCCCTGCGGTGGAGCCCGCCCCCCCCAGCTCGGCCCCCGCCACCCCGGCCCCCCCGCTGGATACACACGATGACTCACAGGGCAAGCACAGTGACTCCAACACACAGGAGATGCTAACGAAGGAGGAGTTAGAAGACAACGTGACGGACCAGACTCATCACATCGTGGTGCCGTCGTATTCCGCGTGGTTCGACTACAACTCCATACACACCATCGAGAAACGAGCGCTGCCGGAGTTCTTCAACGGAAAGAACAAGTCTAAAACCCCTGAGATTTATCTCGCTTACAGaaacttCATGATCGACACATACCGCTTGAACCCTACGGAGTACTTGACCAGCACAGCATGTCGACGTAACTTAGCGGGAGATGTGTGTGCTATCATGCGTGTGCACGGCTTCCTGGAGCAGTGGGGCCTCATCAACTATCAGTTGGAGGCCGAGTCTCGTCCCACAGCGATGGGTCCGCCGCCCACGTCTCACTTCCACGTGCTGTCCGACACACCGTCCGGGCTGCAGCCACTCGTCACCAGGCCCACGCAGCCGAGACCGGCGGAGAACGTGCCGAAGGTGGAGCCAGGTCTGCCCAACGGTGCGGAGGCCGGCGCGGGCGCCGCCCCGCCCGTGCCGCCCATCAAGCCCGAGCCCGCGCTCGAGCTCGGGACTGCGGCGGGACTCAAGCTCGACCAGtaccgcggtggaGTGCGCGGCCGCGGCTGGACGGAGCAGGAGACCCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACAGAGTGGCCGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATAGAGGAGCCATACCTGCATGACGCGCAAGCTgGTGGCGTGTTAGGTCCACTAGCGTACCAGCCGATCCCGTTCAGCAAGACTGGCAACCCTGTGATGTCCACGGTGGCGTTCCTAGCTTCTGTGGTAGATCCGCGGATCGCGTCAAAGGCTACAAGAGCAGCCATGGAAGAGTTTGCTGCCATCAAGGATGAGGTCCCGGCTGCTATGATGGAGGCGCACGTGAAGGCAGCCGGAGCACACGGGCCGGCCGCCGCACTGGCTGCTACTGGTATAGCTGGCACCGCGCCGGAACTGTCACCCACAgCCGAACCCAAGAAGGAGGGCTCATCAGACATCAAGGCAGAGCCAATGGAGGTGGAGGAAGGAGACGCCAAAGTGAAGGACGAACCGGCAGAGGCGCCGCCTGCCGCGCCTGAGGCGGATAAGGAACCCAAGGAGGAGCCGGCAGCACAGCCTGAAAAAACCGAAGCCCCAACGACAGTAGACGCGAAGCTGCAGTCCGCAGCCGCCGCAGCGCTGGCCGCGGCCGCAGTTAAAGCAAAGCACCTCGCCGGCGTAGAGGAGAGGAAGATCAAATCTCTGGTCGCGCTACTAGTAGAGACGCAGATGAAGAAACTGGAGATCAAACTCAGACACTTTGAGGAGCTGGAGGCTACCATGGAGAGGGAACGGGAAGGACTAGAGTACCAGCGACAGCAACTAATACAGGAGCGACAACAGTTCCACCTCGAACAACTGAAAGCTGCCGAGTTCCGCGCGCGGCATCAAGCGCATCAGAGGTTGCAAGCTGAAAGTGGCGGCGCAGGCGCAGTGTCAGCTGTAGGCGCGCCCGCAGGAGTCCCGCCCGCCGCGGGAGCCGCGCCGGCTGACGCGCCGCCCGAGCCCGCGCCCGCCTCGCTCGCCTAG
- Protein Sequence
- MKVFMDMKPGGSLCTMLATMFRFKAEQRWRKFDFQVGKNPSRKDLNVQMMMEIESALSSADVIRAPCVFIRPEVDKATANKVKDIVVNHQGEICEDEEEATHIVYPTVDPLEEEYARPVFRRANHVLVHWYYLPDSHDTWAQADLPVDVPETVSWECTRSEPWRVSASWALDLPQYNEWMNEEDYELDANGKKKVHKLRLSVDDLIPGGEPSSKSKKGSKRKRSPSPPPQKHGKRKSRITKRRENDVDEEEDNASRDNTDAAPTPESERPAEPAAAPPPAVEPAPPSSAPATPAPPLDTHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAGAAPPVPPIKPEPALELGTAAGLKLDQYRGGVRGRGWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDAQAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPELSPTAEPKKEGSSDIKAEPMEVEEGDAKVKDEPAEAPPAAPEADKEPKEEPAAQPEKTEAPTTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGGAGAVSAVGAPAGVPPAAGAAPADAPPEPAPASLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00040769;
- 90% Identity
- iTF_00122340;
- 80% Identity
- -