Basic Information

Insect: Agrotis ipsilon
Gene Symbol: SNAPC4
Assembly: GCA_028554685.1
Location: CM052977.1:8201806-8204220[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 4.2 7.2e+03 -1.8 0.0 4 18 162 176 160 177 0.91

2 6 6.5 1.1e+04 -2.4 0.0 22 33 234 245 232 249 0.82

3 6 2.3e-07 0.00038 21.4 0.2 4 45 268 311 265 312 0.78

4 6 4.2e-09 7.1e-06 27.0 0.1 3 44 320 365 318 367 0.93

5 6 3.8e-10 6.4e-07 30.3 0.0 1 43 371 413 371 415 0.97

6 6 0.00012 0.2 12.7 0.0 3 45 423 467 421 468 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	4.2	7.2e+03	-1.8	0.0	4	18	162	176	160	177	0.91
2	6	6.5	1.1e+04	-2.4	0.0	22	33	234	245	232	249	0.82
3	6	2.3e-07	0.00038	21.4	0.2	4	45	268	311	265	312	0.78
4	6	4.2e-09	7.1e-06	27.0	0.1	3	44	320	365	318	367	0.93
5	6	3.8e-10	6.4e-07	30.3	0.0	1	43	371	413	371	415	0.97
6	6	0.00012	0.2	12.7	0.0	3	45	423	467	421	468	0.91

Sequence Information

Coding Sequence: ATGGATGTTGATGAGATTGTGAAAGACTGTGAGACCGACTCGGAAGTCGAAGATTGCGATGAGGGTTCGATTATTGATGCTGAAACCATGAGCGAGTTGACTGATTTGGTGGACGATGAAGATTTGCCCAGTGGAGGCAGAccgtttacaaaaaatactcccagcgtatttaaacaaaacagtgAATCATCAGCTGCAATAGCTCGAATAAATCTAGCTTTGTCTGCAAACAAATTATTAGATGAAAAGTTGGAAAGAATGGAGAGAGTTCTCCTCTCCCGGCTAAATGAGTGTCGGCAGAAACTGAGACTGGTCCAAAGTAGTGATGGTACCCAGAATGATAGAAATGAAACTTTCCGCTACATCAGTTGTGGTAGACCTTACTTCAAGGATAAACAAAACTTCCCAGCTCCTGACAATGAGGATGCTAAAATGGCAAAATCTCAGATGTATGACTTCTCATTAGTGATCTCTGCCCCAGGTTGGACAGTCAGGGACAAGTCTCAATTGGTTAGTTTGATTCACAAAGTATCAATAGATATTAAAAAGAACGAGCTGCATGATCAAATTACCAACTTGAAACGCACTAAAGAACCAAGTAAAGACttggataaaaaaataatggctatTAGAAAAGAAATTGATAAAGTAAGTAAATTGCCTTTGAGTAAAGTAGCTCTTCCAATAGACGAGGAGTATGACTGGGAAATGAtatcaaacaaattaaacagGAGGCACACAGCACACGAGTATCAAGCCCTCTGGAAGTTATTCTTTCATCCTTCGATTAGTAAAAATGGTTGGGGAACTAGTGAACACACTATGTTACAAAAAATTGCTCTCCATAATCGCAAACAGAATTGGGATAAAATTGCTCGCGAACTTAACACTGGCAGAACTGGCTACCAGTGCTTTGTATACTTTAGAACCAACATGAATAACACATTTACTGGTGCCAAATGGACTCCCGAGGAGATAACATATCTTAAAAGATTAATAGAATACTACAAAGAACATAATTACATTCCATGGGGAAAGATAGCTGCAGCTATGGAAAATCGAACCAAAATCCAAATCTATAATAAGTACATGAGGCTCATTGAACAACGGAAGGGGAGATTCCTCTCTGAGGAAGATGCAGTTATTCTTAACTGTGTGGAGAGATTTGGTACTAATTTCAGGAGGATGACCTCATTTTTACCTGGTCGTTCTATGGTCCAAATACGTACCAGATATCAAGTCTTAAGCAAAATGAGAGTGTCAACAGTATGGACTGTAGAAGATGATAAAAAACTTGTTCAGTTGATGTCCAATCCAGACTCAAACATAAACTTTTCAACAGCCACACAATTTTTTCCAGGCAGAAACAGAACTAAAATTAGATCTAGATATGTAACCTTGGTCAAATGGATGAAAAAACATCCACATTTGGGCTTGGAGCATGCACCTCGACGAGGAGCGCGCCGTTTGAATCATGGacaagcaagtgaaaacttgaatgaTGCAGTTGagaatttgaaaaattctttgaTTTCATCAGTCCAAAATAGGGCTAAGAAAAAGAAGCTAACTGAAGAGTCCACTCACAAAGACTTAAATGATGCTATTGTTGTGTTACTTGTGAACtgtataataaaagaaaaagaagcagAATCCAAGAGAAGTAATCAAGAGGAACATTTAGTTTTGGGTCCAGACCATGTTGTATCATTTGCAGATTTAAATATGACCAACCTGcgcaagaatattatatttttaaatgcttgTCTAGATGAAGCTACTTATATGGAAAGTGACTACAGAGAGGACTATCCCACATTAGGAGATAGTAGTCAAGATGTTTCCTTAGTTAAAGTAAAATCCTATTCTCGAAAAGCATCCAGCCAAACTATAATGATTTCAGATCCTCCTAATGTTTGGGGAACCCCGCCACTTTTTCAAGGTACTCGGCTGTTAAATTCACCAAGCCAGCGGACCTATGTATTGCCTCCGCAACTTGCAACTATTACTGGGGCTAGAGCGATAATGTCGTGTGTGATGGCGAATGGTTCACACAGTGATAATATAAACCTGCATGTGCTTTGCAGGCGGAACATATTATTGAAGGAGTGTTTGGAACACGCTCTTGAACGCTTTTATGTTCTGTTTACGTGGCCTATGATCTTGTCCAATGAAGTACCTAGTGATACTGTTGTGTCATATGAACCAAGAACGAATTCTGTATTTACTAGACCACCAACATTGCCAACAGCACCTGAAGTTACAATTAATGTTAAATGtataaagaaatttaaaaataaagaagttacGGAAAAAATTGATCTTGATGAAGAAGAATCCGcgaaaaaagttgttttaacTGTTGAGGAGAACATAGATACTAGGGATGAGAAGATAGAAAAACTTCTATGttga
Protein Sequence: MDVDEIVKDCETDSEVEDCDEGSIIDAETMSELTDLVDDEDLPSGGRPFTKNTPSVFKQNSESSAAIARINLALSANKLLDEKLERMERVLLSRLNECRQKLRLVQSSDGTQNDRNETFRYISCGRPYFKDKQNFPAPDNEDAKMAKSQMYDFSLVISAPGWTVRDKSQLVSLIHKVSIDIKKNELHDQITNLKRTKEPSKDLDKKIMAIRKEIDKVSKLPLSKVALPIDEEYDWEMISNKLNRRHTAHEYQALWKLFFHPSISKNGWGTSEHTMLQKIALHNRKQNWDKIARELNTGRTGYQCFVYFRTNMNNTFTGAKWTPEEITYLKRLIEYYKEHNYIPWGKIAAAMENRTKIQIYNKYMRLIEQRKGRFLSEEDAVILNCVERFGTNFRRMTSFLPGRSMVQIRTRYQVLSKMRVSTVWTVEDDKKLVQLMSNPDSNINFSTATQFFPGRNRTKIRSRYVTLVKWMKKHPHLGLEHAPRRGARRLNHGQASENLNDAVENLKNSLISSVQNRAKKKKLTEESTHKDLNDAIVVLLVNCIIKEKEAESKRSNQEEHLVLGPDHVVSFADLNMTNLRKNIIFLNACLDEATYMESDYREDYPTLGDSSQDVSLVKVKSYSRKASSQTIMISDPPNVWGTPPLFQGTRLLNSPSQRTYVLPPQLATITGARAIMSCVMANGSHSDNINLHVLCRRNILLKECLEHALERFYVLFTWPMILSNEVPSDTVVSYEPRTNSVFTRPPTLPTAPEVTINVKCIKKFKNKEVTEKIDLDEEESAKKVVLTVEENIDTRDEKIEKLLC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00042579;
90% Identity: iTF_00042579;
80% Identity: -