Aips013531.1
Basic Information
- Insect
- Agrotis ipsilon
- Gene Symbol
- kn
- Assembly
- GCA_028554685.1
- Location
- CM052967.1:10726897-10744212[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-54 1.2e-49 170.1 0.0 11 135 76 190 67 198 0.92
Sequence Information
- Coding Sequence
- ATGCGAATCGTCGTGAGATCGCTCTTAAAAATTCGGTCGGACGAGTTGAACGCGGCGGGCGGGTACACGGGTTCACCGTGGCCGCCGCTGGAACTCGACCCCGTGGGATGGGGCCGAAAGCTGTACCCTTCGGGAGCCCCAAGATCTTCAGGCGGGCTGATGTTCGGCCTGCATCACCAAGAGGCGGCGGGGGGCATCCACGCTCAGCCTCGTGGACCCGTCACCTCGCTGAAGGAGGAACCTCTAACCCGCGCTTGGATGACACCGACCTCACTAGTTGATAATACCAACAGCGTAGGCGTGGGTCGTGCGCACTTCGAGAAGCAACCTCCCAGCAACCTGCGCAAGAGCAACTTCTTTCACTTTGTGGTCGCACTCTATGACCGCGCGGGACAACCAGTTGAAATCGAACGAACTGCCTTCATCGGGTTCATTGAGAAAGATCAGGAAGTTGAAGGGCAAAAGACGAACAATGGCATCCAGTACAGACTTCAATTACTTTATGCAAATGGTATCCGACAAGAGCAAGACATATTTGTTCGACTTATCGATTCGGTGACGAAACAgCCACGTGCCATCCACGTGTCATCCACACGGCTGATTGTCATCACCGTCGCCCGATTAGACCCCTAA
- Protein Sequence
- MRIVVRSLLKIRSDELNAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGGIHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEVEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPRAIHVSSTRLIVITVARLDP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00681454;
- 90% Identity
- iTF_00973509;
- 80% Identity
- -