Aips026257.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrotis ipsilon
Gene Symbol
arid5b
Assembly
GCA_028554685.1
Location
CM052984.1:3845581-3858678[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.6e-14 2.5e-10 41.5 0.0 3 89 226 299 224 299 0.90

Sequence Information

Coding Sequence
ATGTCGGATGAAGTCCTAGCCATCAACGACAAGGTGGTCCTCAGAGCAGATGATCTCCTGTCGTGGATGTGTGTGGGCACGGAGTGGCGCTGGGGGCTCCGGGCTGTGTGGCGAGGGGCCTGCGCCCCGCCTGCTGACATGCCGCGACACGCGCCGTTGACACATACCAAGTTGGATTTCAGTGATGTTGATACGGAGAAGAGTTCTATTGTGGTAGACGCAGACGCTCCAGGCGTGGTGGTCTTCTCCTACCCTCGGTACTGCCGCTACAGAGCGCTCATAGCCAGGCTTGAGGGGATCCAGGCCTCCTGGCTAAGAGACTCGCTGGTCGCGGCTCTGGGAGGGTACGCGGCGCCCACGAATAACACCAGGATATTGTATTGCAAGgACACATTTGAATACCCGGAACTGGAGGGCCACGAGTTCGTGTGTAACCACCTGGCGCCCAGACTGAAAGGAAGGCCACGGGGACGCCGGCGTCGGGCACACTCGCCGGACCTCACGCATCATGACGAGAGAGGATCTGACCGGTCTGACTCGGATGACCCGCCGGCGTCGGGGCCTGCTAGTAGTGATCCGCCGACTCCCCGCCGCCTCTCCCTCCGCAACGGCCCTCCCCCTCCGAGCGACGAGGAGGACGAGGAGTACAAGAGGGCCGAGCAGACGCCGGAGGACCGCGCCTTCCTGCAGCAGCTCAAGTGTTTCTATAAGAACAGGAGCGAGCCCTTCAAGAGTGGACATACGTTGAAGCATTTGTCCCTCCGCGCGCTGTACCTGTCAGTCCTGTCTCGCGGCGGGTACGAGGCGGTCTGCAGACACAAACTGTGGCGAGCACTGGCCAGGGACCAGCCCGCCAGGACCAGGAGACACTATGAGAGATTCCTCCTCCCCTTCGAGAACCACGAGCGACGCAACGGCACCACGTCCTTTAAACCAAACGGGAAACTCGACCCGGAACCTCGCACCATCGCCACTATAGACGTCACAGACTCCCCGCGGAGGGAGGAGGACAACGTCCTCCGCACCCCCTCCCCTCCTCCCAAGACAGACATCGACTGCGAGACCGGAGAGACCACCACCAAAGATGAAATAGTCATTAAGAATGCGGAGGAGTTAAATAGAGAGTTCTTAGAATCTCTTCCTAAGGAGGAGAGTAAGGTGAAGCCCGTGGAGAAGTTGATAGAGCCGGCGAGGGTCGAGGAGGGAGGAGGGGAGGGGAGGACGGAGGAGAAGGAGTTTGGTCAGAGTTTTTTGGGGGATGGAGCGAAGTTTGGTGTTGGAACTGATCTAGGATCCCGAGCGACTCCTCTCAACGGTCACACCGCGCCTGCGCCCGCAGACCTGAAGACATCTCGTCCAGTAGGTCGCAGTTCCCTCCGCGCGGTTCGTGTTAAACCTGCGCGAGCGCAGCTCACTCCCGCCAGCACACCACCGAACCCGCTACGTCCCGAGTCAGTGCCGGTCTCCCCGCCGGTCaccaactttggtatccatcaCCCGCCGCCACAACAGACTCAAATAGATGATGATATTGTGGAGGTCCCATACAAACCAAAAACCCCAGAAATCATCGACCTAGACGAATACCCAGAAAGTCCTCAAGCGGTCAAGAAGAAGAAACTCGACATCCTGAAAGAGAGAGGGCTGGAAGTGACGGCCCTCCCTCCTCCCTGGCAGGCCGTCCCTCCCATGATGGGGCCTCCTATGATCCTGAATCCAGCAGTCCAACATCAGATAATGACACAAGCCCAACTCTTCCAAATGTATAATATAATTCCGCAGAATTATGCCAACGGGATCCAACCTCCGAAAGTGATCCAGGCGTCTTCGATCTTTGGGAACACAGGACCGGAGAAGACTGTCTATGGAAACCCCAAGGACCCATTTATGCCACCTCCTCATGTGCTACACGGGGTACCAGTCAAACCTTTGAAGACTGTAACACCTGCGACAGTACCCCACGATATTCTAGACTTAACCTGCAAATCAACAAGTCCTCCTCCTCCTGCAGTGGAGATAGTAAGAGTACCTCCTTCGCAGTCTCCTACCGCCCAAAATCTAACGAAAAATTACTCTTTAGTCGATGGTAAAGCCGTTGTGGGTTCAAACTTAGAAATAACGTTAGTAAATAAGGCGCAGAGTCCCGGAAAGAACAGGCCTCCGCAAAAACGTTCCAGTAACGGGAAGTTTGTGTCAGTTAAGACCCCTACTCCCCCTAAAGACTACCCTAAATTTACATCCCCGGGGGGTGTGGCAACACAGAAAAAACCCCCGATCAACATCCCTAGTTACCAAATCCGGGAAGATTCGTCCCCAAATCAGAGTCAGATGCTCCAGAATGCGATGAAAAGTCAGAATTTATCTCAAATAATGGATTTGCAGAAGAATTCTGTTCCTATGAGCTCTTTTATGGACCCCTATGTGGCGTTATATAGCAGTCTAGCAGGTCAGATGGATCAAAGACAGCTAGCTATGTACCGTGACTTAATGAGTAATCAATTTCGTTACACGGGACTTTTGAACCTTGGTGTAGCAACTCCTACGacgaaaaattaa
Protein Sequence
MSDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADMPRHAPLTHTKLDFSDVDTEKSSIVVDADAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHSPDLTHHDERGSDRSDSDDPPASGPASSDPPTPRRLSLRNGPPPPSDEEDEEYKRAEQTPEDRAFLQQLKCFYKNRSEPFKSGHTLKHLSLRALYLSVLSRGGYEAVCRHKLWRALARDQPARTRRHYERFLLPFENHERRNGTTSFKPNGKLDPEPRTIATIDVTDSPRREEDNVLRTPSPPPKTDIDCETGETTTKDEIVIKNAEELNREFLESLPKEESKVKPVEKLIEPARVEEGGGEGRTEEKEFGQSFLGDGAKFGVGTDLGSRATPLNGHTAPAPADLKTSRPVGRSSLRAVRVKPARAQLTPASTPPNPLRPESVPVSPPVTNFGIHHPPPQQTQIDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPPWQAVPPMMGPPMILNPAVQHQIMTQAQLFQMYNIIPQNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTVTPATVPHDILDLTCKSTSPPPPAVEIVRVPPSQSPTAQNLTKNYSLVDGKAVVGSNLEITLVNKAQSPGKNRPPQKRSSNGKFVSVKTPTPPKDYPKFTSPGGVATQKKPPINIPSYQIREDSSPNQSQMLQNAMKSQNLSQIMDLQKNSVPMSSFMDPYVALYSSLAGQMDQRQLAMYRDLMSNQFRYTGLLNLGVATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
90% Identity
iTF_00039579; iTF_00043265; iTF_00040579; iTF_00042417;
80% Identity
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