Aexc038573.1
Basic Information
- Insect
- Agrotis exclamationis
- Gene Symbol
- nfxl1
- Assembly
- GCA_950005045.1
- Location
- OX465438.1:18905210-18907690[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 5.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.0053 2.7e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 1.6e-07 0.0081 17.6 15.9 3 19 186 202 185 202 0.95 4 19 0.79 4.1e+04 -3.8 0.6 6 10 227 231 226 231 0.78 5 19 6.8e-08 0.0035 18.8 10.6 3 19 239 255 237 255 0.91 6 19 0.84 4.4e+04 -3.9 1.9 6 10 280 284 279 284 0.83 7 19 2e-09 0.0001 23.7 11.9 1 19 290 308 290 308 0.99 8 19 2.2e-06 0.11 14.0 19.0 3 19 345 361 337 361 0.86 9 19 0.62 3.2e+04 -3.4 0.4 7 11 365 369 365 369 0.84 10 19 1 5.2e+04 -5.3 2.2 5 10 384 389 384 389 0.88 11 19 3.3e-05 1.7 10.2 20.3 1 18 395 412 395 413 0.97 12 19 2.2e-10 1.2e-05 26.7 14.0 1 19 422 440 422 440 0.99 13 19 0.00018 9.2 7.9 4.9 9 19 488 498 486 498 0.89 14 19 0.0001 5.3 8.7 6.8 1 12 508 518 508 518 0.96 15 19 0.17 9.1e+03 -1.7 3.6 14 18 547 551 547 552 0.87 16 19 0.05 2.6e+03 0.1 0.5 7 12 567 572 567 579 0.83 17 19 2.7e-06 0.14 13.7 4.8 1 11 588 598 588 599 0.97 18 19 6.3e-05 3.3 9.3 15.6 4 18 630 645 628 646 0.85 19 19 1e-06 0.054 15.0 10.8 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGCACGCAGATACAGAGATGCAGCTGCAAAATTGCAGCAAAACGTCCAGAAACATCTAAAAGATATGAAGGAAATGTCGTCGTCCGAAGATGAGGATCCATGCGAGTCCAGCGTCTTGGAAACCATGTTTCAGAGCTACTGGCGTGGCGGTGGTGACACTCAGATGCTTAACAGGACCAAAAACCTCCTCGAAGAAGCCATCAGCGGACGCTCAGTTACGTGTCTTATATGCATAGGGTCGATCAAAAAATCTCACGCAATTTGGACTTGTGACCATTGTTTTTCATACTTCCATCTATCTTGTATTCAAAAATGGGCAAACGACAGTATTAGCTTACGTAGCGAAGAAAGTACGGGCCCGATAGCTGTAATAAAGCATCAGAAAATTGAGTGGTGCTGCCCCAAGTGCCGCAATTCTTATTCTAAAGAAGAAATACCTCGAAAATATCGGTGTTTTTGCGGCCAAACTGATGACCCACCACACCATCTGTGGCTTATTCCTCATACTTGTGGTGAAGTCTGCGGAAAAAGGTTATCTACCGGTGATAATTGTAAACATAAGTGCTTGCTGTTATGCCACCCTGGTCCCTGTCCCCCGTGTCCACAAACTGTTAACGGAATTTGTTATTGTGAGAAAGAACGCAAGAGAGTGAGATGCAGCGCTGCTAAATGGTCTTGTGGACAAGTTTGTAAGAAAACTCTTTTATGTAAGACTCATTATTGTGAAAATGTTTGCCATGCTGGTGACTGCCCTGAATGCACCTACACAAGTATTCAACCATGTCAGTGTGGTTCTGAAAAAGCTAAAAGACCATGTAATGATCCATTCTGGCAGTGTAAGAAGCCATGTAACAAATTATTTTCATGTGGCTATCATAAATGTGACAGAATCTGCCATTCTGGTAACTGCGGTGACTGTCCTAACTCTGGCATGTTATCATGTCCCTGTGGTGCCAACCAGCGCTTTGTTCAGTGTCCAGATGTAATGGAAACCTGTTTGGGTACATGTGGGAAAAGGCATGAAGATTGTGAACACAAGTGTCCAGAGAAGTGCCACAATGGCAACTGCCCACCATGTCAAGTTTTAATTGAGAAGAAATGCCACTGCTCAACACATACTAGGTCTCTACCATGTAGCAAGGATTTTAAATGTGAGACAAAATGTAGAGGAATCAGACCGTGTGGCAAACATGGTTGTGGAAGAAAATGCTGCAATGGTAACTGCCCACCATGTGAGAAAACATGCGACAAAGGTCTTCAATGTGGTCGGCATAAGTGCACAAATATCTGTCATCGTGGACCGTGCTACCCATGCCCGCTAGAATCTAAAGTAACTTGCAGATGTAAAGAAACTTATGTCAGAGTCCCCTGTGGACGGGAACGGCAAACAAAACCACCAAAATGTAACTTGCCTTGCAAAATAAGGTACAAATGTGGTCATAGTGAAGAAAATAAACATTCTTGTCATTTTGGTGATTGTCCGTCCTGCAAAGCAATTTGTGACAAGCAGTACCCTAAGTGTGGGCATAATTGTAAAGCAGTGTGTCATGAATATGTTGCAGTGCTGTTCAAACAAGTGGAGAAACCTGCCACCCCATGGGAAGTACAACCTCCAAAGACTAAGATCATGACCTTGGATTGTCCACCATGTGACACACCAGTAACAATGATTTGTTTTGGAGAACATGAGACGGATCAGCAACCTTGCCATTCAGCTTCTCGCAGGCCTTGCGGAAGAGAATGTGGAAAACCATTGGCTTGTGGCAACCACAAGTGCTCCTTACTCTGTCATCTTTATAGCCCTCTTCCTCAGTATCCAAATGTGCCTTCCAGTTGTAGGCAATGTAACAGAGAATGTTCTGTTCGGCGTCCTGAAAAATGTGCTCATAAATGTCCCATAAAGGCTTGCCATCCTGGACCATGTCCACCATGTGAGATACTTGAACGTTTAGCATGTCATTGTGGAGTAACTGAGATATATTTACGCTGTCGAGAACTGTCCTCGGCTTCTGAAGAGATGCTATCGTGTAAGCAACAATGTCCTAAGAACTTGGAGTGTGGTCACCGCTGCCGGAACATTTGTCATTCAGGAGCTTGTGGCAACCAAGTATGCACTAAGAAGACTAAAGTGCATTGTCCGTGTGGTAATTTAAAGAAGGAGGCTCCTTGCAATTCAGTTAGAAGTGGAGAAGCAAAGATACTGTGTGACCAAACCTGTGAAGCCAAGAAAGCTGCAGCTAAAATAGAACAAGAGAAAGAGAAGCAGAGGTTGAAAGAGTTAGAAGAAGAAAAGAATCGTAAAGAGTTAGCAGAGTATGAGTGGAAGTTAAGTGGTAAGAAGAAGAAATATAAGGAGAAGAAACTGGTTGTTGATAAGGATGACCGCGGCTTCCTAAAGAGATATTGGGTACCAATATCATCATTCCTAGTTATGATGCTAGcttctatttattatatattttatgtagAATTAGAATAG
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKDMKEMSSSEDEDPCESSVLETMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCDHCFSYFHLSCIQKWANDSISLRSEESTGPIAVIKHQKIEWCCPKCRNSYSKEEIPRKYRCFCGQTDDPPHHLWLIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCEKERKRVRCSAAKWSCGQVCKKTLLCKTHYCENVCHAGDCPECTYTSIQPCQCGSEKAKRPCNDPFWQCKKPCNKLFSCGYHKCDRICHSGNCGDCPNSGMLSCPCGANQRFVQCPDVMETCLGTCGKRHEDCEHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRSLPCSKDFKCETKCRGIRPCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIRYKCGHSEENKHSCHFGDCPSCKAICDKQYPKCGHNCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVTMICFGEHETDQQPCHSASRRPCGRECGKPLACGNHKCSLLCHLYSPLPQYPNVPSSCRQCNRECSVRRPEKCAHKCPIKACHPGPCPPCEILERLACHCGVTEIYLRCRELSSASEEMLSCKQQCPKNLECGHRCRNICHSGACGNQVCTKKTKVHCPCGNLKKEAPCNSVRSGEAKILCDQTCEAKKAAAKIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKLVVDKDDRGFLKRYWVPISSFLVMMLASIYYIFYVELE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- iTF_01440670;
- 80% Identity
- -