Basic Information

Insect: Agrotis exclamationis
Gene Symbol: -
Assembly: GCA_950005045.1
Location: OX465441.1:11883935-11894075[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.04 5.5 9.1 0.4 3 23 231 252 230 252 0.97

2 8 0.21 28 6.9 0.5 1 23 257 279 257 279 0.97

3 8 0.00057 0.077 14.9 2.5 1 23 283 305 283 305 0.98

4 8 0.0039 0.54 12.3 1.8 1 23 318 341 318 342 0.94

5 8 5.9e-05 0.0081 18.0 1.7 1 23 345 367 345 367 0.99

6 8 0.00031 0.042 15.8 2.5 2 23 400 421 399 421 0.96

7 8 0.0078 1.1 11.4 1.3 1 18 427 444 427 451 0.83

8 8 0.6 83 5.4 0.4 2 23 456 478 456 478 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.04	5.5	9.1	0.4	3	23	231	252	230	252	0.97
2	8	0.21	28	6.9	0.5	1	23	257	279	257	279	0.97
3	8	0.00057	0.077	14.9	2.5	1	23	283	305	283	305	0.98
4	8	0.0039	0.54	12.3	1.8	1	23	318	341	318	342	0.94
5	8	5.9e-05	0.0081	18.0	1.7	1	23	345	367	345	367	0.99
6	8	0.00031	0.042	15.8	2.5	2	23	400	421	399	421	0.96
7	8	0.0078	1.1	11.4	1.3	1	18	427	444	427	451	0.83
8	8	0.6	83	5.4	0.4	2	23	456	478	456	478	0.96

Sequence Information

Coding Sequence: ATGGAAAATACCTTGGACTTGAAGCTCTTGATAAAACATCTTTCAAATTGCACGCTTGGCGAAAACTTGTGCATAAATTGTCTAAAGCCACTTCAGGAACACTATGAGAATATATTTACTAAAATCTGTAAATATGACAAAGAGTATTGCATAGCAGACGTTCTGCAAATCATGTGCGATGTTGAGTTTTCAGAAACTGATAACTACAATGTCTGCGTCGATTGCTTTATGATGGCATCCATGGCTTACAAGTTCTACTTGCTTTCCAAACGAAGTCATGAAATCCTCAACTTCTATACCAACGAGCTCCTCACCAACTTAGACCAGATACAGTTGCCTGAAGAAACCAACACATTATGTATTTCCCTACCTGAAATAATTACAGAAACACCAATTTACGACTTTAATTTACATGCAATAGGTAAGAATATGATGGATGAGACCGCAGAATGTGTGAAAATTAAAACTGAAGTTACTGAAAAGGAAGAAGATGATAAAGTAGTGGTTATAATACAAGACAACGGTATGCCTTCATTTTTCCATGTTAAACCCGATGGAGTTCTGACTGCTCTTGATGAAAATGAAGctagaaaatatacaaaaaagtttaatgcTTCTATACAGCTTCCTACAGAGGTAGAGAAAAGGGCTAAACGAGGGAGGAAGAGGGGACCGATGAGTTTCAAGCTGTGCTCCCGTTGTCCAGTAAAATACAGGTTTATTGCTAAACTGAAGGAACACATGAGATTGGAGCATAATGTAGTGCTATATGCTTGTGagGTATGTAAAGCTCTAACAGAAGATGAACAGGAGTACCACAGCCACCTGCGAACCCACACCAACATACACCAGTGTGACCTCTGTAACATGGTGTTCAAGAAGAGAGCCACCATCATTAAGCATCTCAAGCGACACGAAAGGATGAAGAATGTTGCTCATACGGACAACGCGCACATCTGCGAGCAATGTGGCAAGATCCTGGAGAATGAGGAGTCTCTCCGGCAGCACTACGAGAGCAAGCATCACAAGAAATACACTTGCTTCTACTGCGGACGTATGTACAAAGGGGAGTCCAGCTTCGAGATGCACATCAAGAAACATGAGGATAATATGGAGACCGGGAAATATAGGCATAATGTgtacaaaaagaaagaaactaaTGTAAATGAGAAGGGAAAGTCAGTAATAAAGCGCTGTATGTGTTCTACATGCGGCCGCCATTTTGTGGACGAGCGCGCGCTGCTGTGGCATCAACGACTACATAACAACGAGAGACCTTATACTTGTAATGACTGTGGGCGCAGTTTCGTGTCCCTGAACCGTCGCAACCAGCACTCACTGTGTGCACACACGGCCCCCACACGACGATGTCCTCTCTGTCCCGCGCTCTTCCATCTACGGTCCATGGTCAACACACACGTCAAGAAGGTACATTTAAAACAGCACAAGCGTCGTAACCGTGTCACTAAGCATCAGAATGTATTCTGGCCAACGAAGACAGTTCCCGTGCAGGAACTAAGTGTGGAGATACAGAATGATATACTGGAGCTTCAAGCAGCTAACAAAGACCAGGCATGGACATACATCGAGGAAGCACCAGCTGTAATAGAAGGCACATGA
Protein Sequence: MENTLDLKLLIKHLSNCTLGENLCINCLKPLQEHYENIFTKICKYDKEYCIADVLQIMCDVEFSETDNYNVCVDCFMMASMAYKFYLLSKRSHEILNFYTNELLTNLDQIQLPEETNTLCISLPEIITETPIYDFNLHAIGKNMMDETAECVKIKTEVTEKEEDDKVVVIIQDNGMPSFFHVKPDGVLTALDENEARKYTKKFNASIQLPTEVEKRAKRGRKRGPMSFKLCSRCPVKYRFIAKLKEHMRLEHNVVLYACEVCKALTEDEQEYHSHLRTHTNIHQCDLCNMVFKKRATIIKHLKRHERMKNVAHTDNAHICEQCGKILENEESLRQHYESKHHKKYTCFYCGRMYKGESSFEMHIKKHEDNMETGKYRHNVYKKKETNVNEKGKSVIKRCMCSTCGRHFVDERALLWHQRLHNNERPYTCNDCGRSFVSLNRRNQHSLCAHTAPTRRCPLCPALFHLRSMVNTHVKKVHLKQHKRRNRVTKHQNVFWPTKTVPVQELSVEIQNDILELQAANKDQAWTYIEEAPAVIEGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01093599;
90% Identity: iTF_00043047;
80% Identity: -