Basic Information

Insect: Agrotis exclamationis
Gene Symbol: -
Assembly: GCA_950005045.1
Location: OX465419.1:7773639-7782537[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.6e-05 0.01 17.7 2.2 1 23 210 232 210 232 0.97

2 20 0.004 0.54 12.3 0.6 1 20 238 257 238 260 0.94

3 20 2e-05 0.0027 19.5 5.6 1 23 279 301 279 301 0.98

4 20 9.2e-05 0.013 17.4 4.1 1 23 307 329 307 329 0.99

5 20 3.5e-05 0.0048 18.7 5.3 1 23 335 357 335 357 0.97

6 20 8.1e-06 0.0011 20.8 7.4 1 23 363 385 363 385 0.97

7 20 6.8e-07 9.3e-05 24.1 2.9 1 23 391 413 391 413 0.97

8 20 9.6e-05 0.013 17.4 6.7 1 23 419 441 419 441 0.97

9 20 1.8e-05 0.0025 19.6 6.4 1 23 447 469 447 469 0.98

10 20 4.6e-07 6.3e-05 24.7 1.9 1 23 475 497 475 497 0.98

11 20 9.1e-06 0.0013 20.6 7.7 1 23 503 525 503 525 0.98

12 20 2.4e-05 0.0033 19.3 3.9 1 22 531 552 531 552 0.95

13 20 1.9e-06 0.00026 22.7 4.2 1 23 594 616 594 616 0.98

14 20 6.3e-06 0.00086 21.1 5.0 1 23 622 644 622 644 0.96

15 20 1e-05 0.0014 20.4 5.2 1 23 650 672 650 672 0.98

16 20 2.9e-06 0.0004 22.2 6.0 1 23 678 700 678 700 0.98

17 20 5.6e-05 0.0077 18.1 7.9 1 23 706 728 706 728 0.97

18 20 5.7e-06 0.00078 21.2 5.4 1 23 734 756 734 756 0.98

19 20 0.00069 0.095 14.7 0.3 1 23 763 785 763 785 0.96

20 20 0.44 60 5.8 5.1 1 23 797 819 797 819 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.6e-05	0.01	17.7	2.2	1	23	210	232	210	232	0.97
2	20	0.004	0.54	12.3	0.6	1	20	238	257	238	260	0.94
3	20	2e-05	0.0027	19.5	5.6	1	23	279	301	279	301	0.98
4	20	9.2e-05	0.013	17.4	4.1	1	23	307	329	307	329	0.99
5	20	3.5e-05	0.0048	18.7	5.3	1	23	335	357	335	357	0.97
6	20	8.1e-06	0.0011	20.8	7.4	1	23	363	385	363	385	0.97
7	20	6.8e-07	9.3e-05	24.1	2.9	1	23	391	413	391	413	0.97
8	20	9.6e-05	0.013	17.4	6.7	1	23	419	441	419	441	0.97
9	20	1.8e-05	0.0025	19.6	6.4	1	23	447	469	447	469	0.98
10	20	4.6e-07	6.3e-05	24.7	1.9	1	23	475	497	475	497	0.98
11	20	9.1e-06	0.0013	20.6	7.7	1	23	503	525	503	525	0.98
12	20	2.4e-05	0.0033	19.3	3.9	1	22	531	552	531	552	0.95
13	20	1.9e-06	0.00026	22.7	4.2	1	23	594	616	594	616	0.98
14	20	6.3e-06	0.00086	21.1	5.0	1	23	622	644	622	644	0.96
15	20	1e-05	0.0014	20.4	5.2	1	23	650	672	650	672	0.98
16	20	2.9e-06	0.0004	22.2	6.0	1	23	678	700	678	700	0.98
17	20	5.6e-05	0.0077	18.1	7.9	1	23	706	728	706	728	0.97
18	20	5.7e-06	0.00078	21.2	5.4	1	23	734	756	734	756	0.98
19	20	0.00069	0.095	14.7	0.3	1	23	763	785	763	785	0.96
20	20	0.44	60	5.8	5.1	1	23	797	819	797	819	0.98

Sequence Information

Coding Sequence: ATGATACAACTAAAACAGATCCAACTGACGGTAAGCGAAGACGGCATTGTGACTGTGGTGGAACCCGCCGGCACAAAGATGGTCGATAAGGAGGAGCTACATGAGGCCATCAAGATGCCCAACGACCACACCCTGACAGTGCACCAGCTGCAGCAAATAGTGGGACAACAGGTGTTAGACAGCGTTGTTCGCATAGAACAAGCGACCGGTGAGCCGGCCAACATCCTAGTGACCCACAACCCTGACGGTACGACCTCCATTGAAGCCAGTGCTGCCGACCCCATGATTGTCAAAGACGAGAAGAGTGCTAACAAAATAGAGACTGCACAGTTTGCCATACCTGCTGAGATAAAAGATATAAAGGGAATTGACTTGAAGAGTGTAGGAGCCATGGGCATGGAAGGCGCAGTGGTGAAGATCTCAGCTGGGGCGTCAGAGCACGACCTTCATGCGATGTACAAAGTCAATGTTGAAGATCTGTCACAACTGCTTGCCTACCACGAAGTCTTCGGGAAACTTAATTCGGAAGGCCAACAACAACCAGCTAAGGTTATCAATGAGGTAGAAGTCGAAGTGGAAGCCGGCACCAGTGCAGCTATGTCAGAAGCCGAATCTTCACCCGGCCACCACTCATGTGATATCTGCGGGAAAATATTCCAATTCCGATACCAACTTATTGTTCATAGGCGTTATCACGGCGAAAGTAAACCGTTCACGTGTCAAGTTTGCGGTTCCGCATTCGCTAATCCTGTCGAATTATCGAGGCATGGAAAATGCCATCTTGCCGGAGACCCGAACGAAAGACACGCGAAGAGGATGGCCCAGGATAAGCCATATGCCTGCACCACTTGCCACAAAACTTTCTCCCGTAAAGAACATTTAGACAACCATGTTCGGAGTCATACTGGAGAAACTCCTTACAGATGCGAATTCTGCGCAAAGACTTTCACCCGCAAAGAGCACATGGTCAACCACGTACGAAAACATACGGGCGAGACTCCACACCGATGTGACATTTGCAAGAAGAGCTTCACAAGAAAAGAGCACTTCATGAACCATGTTATGTGGCACACAGGTGAGACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGATACTCCTTTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGAGAAACCCCGCACCGCTGCGACTTCTGCTCGAAGACGTTTACACGTAAGGAGCATCTATTGAACCACGTCCGTCAGCACACCGGCGAGTCTCCTCACCGCTGCAACTATTGCAGCAAGTCATTCACTCGTCGAGAGCATCTCGTCAACCACGTGCGACAACATACTGGGGAGACGCCCTTCCAGTGCGGATACTGCCCTAAAGCGTTCACAAGGAAGGACCACCTCGTGAACCACGTCCGTCAGCATACAGGCGAGTCCCCGCACAAATGCTCATACTGCACAAAGTCTTTCACTCGCAAGGAGCATCTGACGAATCACGTTCGACAACACACTGGCGAGTCGCCGCACCGATGTACTTACTGCGCCAAGTCCTTCACAAGAAAAGAACACCTCACCAATCATGTCAGGAGAATGTTGTTCTATCCGTTCCCTTCCTCTTGCGGTAGCGACGGCGGTAGTATTAATTGGCATGTTGTTAATAATAAGGAATCGGAATGTACTCTGTTGCGCAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTACTGCCCGCGGGCCTTCGCGCGCAAGGAGCACCTCAACAACCACATCCGGCAGCACACCGGCGTCTCACCGCACGCCTGCTCCTACTGTAGCAAGAGCTTCACCAGGAAGGAACACCTCGTTAACCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTTTTGTTCAAAGTCGTTCTCTCGTAAGGAGCACCTCACGAACCACGTGAACCTTCACACAGGAGAAACGCCCCACAAATGTCCCTTCTGCACAAAAACATTTTCCAGAAAGGAACACTTGACCAATCATGTCAGGATTCACACTGGCGAGTCTCCGCATCGCTGCGATTTCTGTCAAAAGACGTTCACTCGTAAGGAGCACTTGACGAATCATCTGAAGCAGCACACGGGCGACACCGCACACGTCTGCAAGGTGTGCTCCAAGAATTTCACCAGAAAGGAACATCTTGTCACGCACATGCGGTCACATAGTTGTGGCGAGCGTCCATTCAGTTGCGGCGAATGCGGCAAGTCTTTCCCCTTAAAAGGCAACCTACTCTTCCATGAACGATCGCACATCAAGAACAATGCCAATGCTGCCAATAAGCTGTTCCGATGTGAAGTCTGTTCTAAGGAGTTCCTTTGTAAAGgCCATTTGGTGTCTCATCGGCGCACGCACGCAGAGTGGGCGGAAGGTACCGCGCCTGGCGAAGCACCCGCTGAAACAGAAGACTGTAATGATAATAAGTGTATCAAAGTCGAACCAGAACGAACGGAGAGGAAACATGAAGTcagGACGACTGTTGAAACGAGACCGGCTGAGCAGAACAATGTCGCACAAAGTCAACCAAACACGCCTACTGTGATGATAACTAATAATCAACAAGTCCGCGCGGCGACCGTGAGCACAGTGGGCGCCGTGAACCCCGTAGCAGTGGGTGCAGTGGGCGCGGTGGGCGCGGGCGCCGGCTCCTTCACACACACAGTGGGCACGCCGCACCACGCGCCCGCCAACATCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MIQLKQIQLTVSEDGIVTVVEPAGTKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPMIVKDEKSANKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQPAKVINEVEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRRMLFYPFPSSCGSDGGSINWHVVNNKESECTLLRRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVSPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKNFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHIKNNANAANKLFRCEVCSKEFLCKGHLVSHRRTHAEWAEGTAPGEAPAETEDCNDNKCIKVEPERTERKHEVRTTVETRPAEQNNVAQSQPNTPTVMITNNQQVRAATVSTVGAVNPVAVGAVGAVGAGAGSFTHTVGTPHHAPANIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -