Basic Information

Insect: Agrotis clavis
Gene Symbol: -
Assembly: GCA_954870645.1
Location: OX940919.1:231382-246905[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0032 0.39 12.7 2.9 1 23 306 328 306 328 0.98

2 7 0.77 94 5.2 2.1 1 23 335 357 335 357 0.86

3 7 9.8e-05 0.012 17.4 0.4 2 23 364 385 363 385 0.96

4 7 3.4e-05 0.0042 18.9 3.5 1 23 391 413 391 413 0.98

5 7 0.00022 0.027 16.3 2.1 1 23 419 441 419 441 0.96

6 7 1.5e-05 0.0019 20.0 0.9 1 23 447 469 447 469 0.97

7 7 7.1e-06 0.00088 21.0 0.9 1 23 487 510 487 510 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0032	0.39	12.7	2.9	1	23	306	328	306	328	0.98
2	7	0.77	94	5.2	2.1	1	23	335	357	335	357	0.86
3	7	9.8e-05	0.012	17.4	0.4	2	23	364	385	363	385	0.96
4	7	3.4e-05	0.0042	18.9	3.5	1	23	391	413	391	413	0.98
5	7	0.00022	0.027	16.3	2.1	1	23	419	441	419	441	0.96
6	7	1.5e-05	0.0019	20.0	0.9	1	23	447	469	447	469	0.97
7	7	7.1e-06	0.00088	21.0	0.9	1	23	487	510	487	510	0.97

Sequence Information

Coding Sequence: ATGGCCGAAACGAGTACAATGAACTCCGATAATAAAGTGGAACAGATCGAGAAGAAGGATGCCATTGAGAGCATTAAGACCGAGGAGGAAGTGCGGGTGAAGCACGAGCAGCTGGAGTGCGTAGCGTGCACCACGCGCAGCTTCGAGTGCGTGGACATCTACTGTACCACGACGCGCGCGTCGGGCGCCAAGCTCAGCACCTTTCTGCACAAGTTAACGCAGATCGAATTGGCCGGCCATACCGCTTCCAAGTTCATGTGTAAGAGCTGCTACGACCTCATCAACTTGCTCGAGCAAGCGGAGATCGAGTATTTCAAGTTAAAGGAGGCCTTCGAAGCCATCCTAGCCAAGAACCCCTTGTTCGATCTGACAGCTGTGCAGCCCATCCGGTTGACTGACGTGAAGGCGGAATTTGACGCTGATGATGACGAAGACTACGTGTGTGACAATATGGACGATGACGACTCGGACGATGAACCACTGGCCACTCAGAGCAAGCGAAAGAGATACAGAGttgagaagaaaaagaaaaaagtgtccACCAACAAACGTAAAGTGAGAAGTAAAGCCAACAGTGACAGCTGGCAATGTGATGATTGTGGAGCAAAAGGTACAACAGGAGGTCACATAGGGCTCACAGCTCACAAGCTTGCTGTGCACACCCTAGAAGACCCGAATGCCTTGTTGAGTTGTGAGGTCAAGGTTGAGAACTCTGTTGAAGGatcaCAAAGTCCCCTGTACAACAATGGATTTGGTAACTGTTTAAAAGTTGAGATAGATAATTTTGATGACAATGAAAGTTTGGGTGTTGATGACCTCAGCAATGACATACAACCCATCAAGAAAAAAATAGGCAGACCATTAAAGACTAAGATGATACCGGCACAGGCTAGAAAGAAGAAGTCCAAAGCGGTGCATCAGTGTGACCAGTGTGATGCTAAATATACTTCTTTATCGCGCCTGGAGCAACACAAGCAGAAGCACGACGGCTCCAAGCCGCCCTACATCTGCGAGGTGTGCGGCGCGCACTACAAGCACAAGCGAGCCTGCGACATACACATCGCGCTACATAAAGgTATTAGTGATTGGAAATGTGAAGAATGCAATAAGTTATTCCCGTCTAAGAATGCCCTACAGAGGCATAACAACATACATACCGGCAAGTTGAACTATCAGTGCGACTTGTGCGGCAAGTCGTTCATCCACACGTCGTCGTTCAAGATGCACAAGCTGTCGCACTCGGGCGTGAAGCCGCACGCGTGCGACGTGTGCGGGCTGGCGCTCATGACGCGCTCGCACCTCAAGAGACACAAGCGAGTGCACAGCGGGGAGAAGAGGCACGAGTGTGCCGTCTGTGGAAAGCGCTTCTCTGAGAGGTACAACCTGGCGGCACACAGTAAGTCTCACGAGGCCAGCGAGGCGCAGGCACTCGCCCGCGACCAGGCGCGCCGCAGACTGTTCCGCTGCACCTTCTGTCCAGAGCGCTTCGAGCGACGCTACATGTTGGAGCGTCACATGTCGGTGGTGCACGGCCGCACGCTGGAGCGTCCCCCCCCCACTCCCCGCAACACTATGAGCAAGCTGCTGAAGGCGCAGGCACAACGCAGGGACGCCACCAATGATGTGGATACGAAGGACGACCGCAGTTCAGACTCACGCACCACACCCATCACACCTCAGAAACTCATCGCGCAACTATCATCGTCAAGTTCTATAGCACAGAGCGCGTGGGGCAGCTCATACGCGGCCGAGTTCCTGCGTCACGAGTACCCGCACTGA
Protein Sequence: MAETSTMNSDNKVEQIEKKDAIESIKTEEEVRVKHEQLECVACTTRSFECVDIYCTTTRASGAKLSTFLHKLTQIELAGHTASKFMCKSCYDLINLLEQAEIEYFKLKEAFEAILAKNPLFDLTAVQPIRLTDVKAEFDADDDEDYVCDNMDDDDSDDEPLATQSKRKRYRVEKKKKKVSTNKRKVRSKANSDSWQCDDCGAKGTTGGHIGLTAHKLAVHTLEDPNALLSCEVKVENSVEGSQSPLYNNGFGNCLKVEIDNFDDNESLGVDDLSNDIQPIKKKIGRPLKTKMIPAQARKKKSKAVHQCDQCDAKYTSLSRLEQHKQKHDGSKPPYICEVCGAHYKHKRACDIHIALHKGISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHACDVCGLALMTRSHLKRHKRVHSGEKRHECAVCGKRFSERYNLAAHSKSHEASEAQALARDQARRRLFRCTFCPERFERRYMLERHMSVVHGRTLERPPPTPRNTMSKLLKAQAQRRDATNDVDTKDDRSSDSRTTPITPQKLIAQLSSSSSIAQSAWGSSYAAEFLRHEYPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908327;
90% Identity: iTF_00041260;
80% Identity: -