Basic Information

Insect: Agrotis clavis
Gene Symbol: ZNF296
Assembly: GCA_954870645.1
Location: OX940946.1:664330-675808[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.6 3.2e+02 3.5 0.1 3 23 120 140 118 140 0.95

2 14 0.0023 0.29 13.1 2.8 1 23 275 297 275 297 0.99

3 14 9.7e-05 0.012 17.4 0.2 1 23 303 326 303 326 0.96

4 14 0.0046 0.57 12.2 1.6 1 23 331 354 331 354 0.94

5 14 8.8e-06 0.0011 20.7 1.5 2 23 531 552 531 552 0.98

6 14 0.00024 0.03 16.2 3.2 1 23 558 580 558 580 0.98

7 14 6.7 8.3e+02 2.2 5.2 1 23 644 666 637 666 0.96

8 14 0.02 2.5 10.1 1.9 1 23 701 723 701 723 0.96

9 14 0.00027 0.034 16.0 2.1 1 23 729 751 729 751 0.98

10 14 2 2.5e+02 3.9 7.1 1 23 760 782 760 782 0.98

11 14 0.00067 0.083 14.8 0.6 2 23 842 863 842 863 0.97

12 14 0.0067 0.83 11.7 3.7 1 23 880 902 880 902 0.96

13 14 2e-06 0.00025 22.7 0.7 1 23 908 930 908 930 0.98

14 14 6.9e-07 8.5e-05 24.2 3.1 1 23 936 959 936 959 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.6	3.2e+02	3.5	0.1	3	23	120	140	118	140	0.95
2	14	0.0023	0.29	13.1	2.8	1	23	275	297	275	297	0.99
3	14	9.7e-05	0.012	17.4	0.2	1	23	303	326	303	326	0.96
4	14	0.0046	0.57	12.2	1.6	1	23	331	354	331	354	0.94
5	14	8.8e-06	0.0011	20.7	1.5	2	23	531	552	531	552	0.98
6	14	0.00024	0.03	16.2	3.2	1	23	558	580	558	580	0.98
7	14	6.7	8.3e+02	2.2	5.2	1	23	644	666	637	666	0.96
8	14	0.02	2.5	10.1	1.9	1	23	701	723	701	723	0.96
9	14	0.00027	0.034	16.0	2.1	1	23	729	751	729	751	0.98
10	14	2	2.5e+02	3.9	7.1	1	23	760	782	760	782	0.98
11	14	0.00067	0.083	14.8	0.6	2	23	842	863	842	863	0.97
12	14	0.0067	0.83	11.7	3.7	1	23	880	902	880	902	0.96
13	14	2e-06	0.00025	22.7	0.7	1	23	908	930	908	930	0.98
14	14	6.9e-07	8.5e-05	24.2	3.1	1	23	936	959	936	959	0.98

Sequence Information

Coding Sequence: ATGAACCACGCGGCAGCTGCTATCCCAGGGAACATGGACGTAGACCCGCTGAGCTCGTACGAATACCCCGTATATGACAGTTACGGAGCCCCAGCGTACCAGTATCCCAATAAGTTACAGCAGTCCATATATGATGCGTACCAACAAACAAGCGCTAACTACATGAACACACAACCACAAGAACCGGTCACCAATCCACCGCAAACATCACAAACGCCCGTTGAGGTAGAATTACAACCTAAAATTGAACAAACGGAACCGAAACCAGTCTCAAAAAGAAGAAAGAAGGAGAAGAATGGACAAAAGAGTACTTACTGTTCTGAAAAGATCACAGATGCAGCGTTCCAGTTCTATGGTTGTGCTGTCTGTAATGTCAGCTACAACGCATTACATGAGCTCGACCAGCATGTGACCGTCCACAAGAACCGAATGACGAGTTACAGACTACGTCTTAGGaatcaatttaaaaagaaacaaattaaaaaagaaaagaaaaaattaaaaaagttagttaaaataaaaaaagaaacggaACTAGACATTGAAATTAAACCGGAAGACGGTTATATTGGTGAAGAAAAAGCAACAGATTTTATGAATAATGGAGTTAACGCTAATGAAAATGTAAATAGTGAAAATAGTTCAATTCAAGATGGGAATAGTCAAATTAGTAGCAATAATGATAAAAATTCTACAAGTAACAACGTCCAAAGTAAAGAAAGGGTCTCGCCAAGTAACGTGAACAATGAGAACAGTTGCGTCGGAATGAATACTAAAGACAATAATATGGACGAAGCAGAGTTGAATAATTTAGAGAAAATTTACAAATGTTTTGCGTGTCAAAAGCAGTTTACTTTgagttattatttgaaactacACGTGAGATCACATACAGATGAGAAGCCATATACGTGTGCGGTGTGCGGTCAGTCGTTCATTACGGCGAGCAAACTCGGGCGACATAACAAGCGTATTCACCTCGCTGAGAGATACCAATGTCGCATCTGTTTCAAGATCTACTCAAGGTTCGAGTTGCTGACGGCGCACTTCGACAAGACGCACCCAGAAGACAAGCTGGAGGGAGAGCCATACGACTACAACGCGATCCTGCCGTACCTCAAAGAGTTGGAGGAGCAACTCCGCGCGCCGCCCGAGCAGGGGCCGCTCGGGAACGGGGACAGTGGGACACAGGGGTCTGGGGACAGTCATGGACCGCTGGGGCCGGCGCCGGCACAGGGCGCCGCAGTCTGGGGGCTGCCGGGAGACGAGCTCGCCGGGGTCAAAGAGGAGGTCATCGACGAAGACCAAAAGGACTTAGTACCCAAACTGGACATATTGATAGAAGAAGTGAAGGTGGACTTCGAAGAAACGCCGGTCAAGCGCGAGCTGTCCGATGACGAGGCGCCCGCTGACGTCGGCGGTGACGCGGCCAGTGACGTCGGCGGGGACGCTGACGTCGGCGACGTGAAGGATGAGGATAGCAACTCAGATTCGGATTACTTCCCCGAGAACACGTGGGCGGCCCCGCACACCCGCTCCCCTCCCCCGCCCGCACTCCCCCCCGCCCCCCGCAGGAGACGAGCGTCGCGCACGTGCGAGGTGTGTCACAAGAGCATCAGTAGCGCGTCGTACCTGCGCGTGCACATGCGCACGCACACGGGCGAGCGCCCCTTCAAGTGCTACACGTGCGGCCGCGGGTTCATCACCAGCAGCAAGATGCACCGCCACGTGCTCACGCATGCACAAGaCAAAGATGAACTCAAAACGGAGATCGAGGACACAAAACCTGAAGTGGACGACGGAGCGGACGAAAAACAAGAAGAAAATGGCGATAAGAAACCATCAAAGAAAAAACTCAAGAAGAAGTCGAAATCTTTGAAATCAAAAAATGCAGAAGTGAAACCACGCCGCAAACATCAGAAGAGACCGCATGCCTGCGAGTTTTGTAACCAAAAGTTCCTTCACCTTAACATGCTGGAGGTCCACAAGCAGTCGCACGCGGGCGAAGCCCTAGTGCTGCGCTGTCACTACTGCCTGCAGGACGCGCCCGACGAGGCCGCGCGGAAGGAGCACGAGGCCACGCACACGGGACCGAAGCCCTATCTCTGTACTATCTGTGGGAACACTTACAAAAAGAGGGAGACTATGGTGTACCACCGCAAGCGCCACGCCCCCGACAAGGAGTTCGTGTGCGACGTGTGCTCCAAGCGGTTCAGCGCGGCCTGCAAGCTGACCAAGCACCTGCTGACACACGCGCGCGAGCGACGCCACGTGCGGTACGAGTGTCCCGTGTGCGCGCACCTGTTCCACACCAAGTACCACGTGCACATGCATCTCAGCACGCACCAGAAGGAAGGCCTTATCCTCGAAGAAAATCGCAACGAGATCCTGGCAATGGTCCTTCAGAACGCTCGCTCGTACCCGGCAGGCCCCGCCCCCCCCGCGGGCCAGCTCCTCCCCCCGGGGGAGCTCCTCCCTTCAGGGCAGGTCCCTCCTTCCCTCCCCCCCGACGAGCGCTCCCGCGTGTGCAACATATGCGGGGATGTGTTCTCACATTTTTACTACTTAGAGGAGCATTTGAAAAGTCATGCTTCCAGAATTTCTATAGACGATATAGATAAGGAAGaggaaaagaaatatatttgcTCTATTTGTAATAAGGGCTTTAAGCtacattattatttgaaattacATAGTTTTACGCATTCTAAGGAAAAACCGTTTATTTGTCAGCAATGTGGGAAAGGATTTATTACGAAGGGAAAGTTGAAGAGGCATTTGGAGACACATACTGGCCTTAAGAAGTATCAATGTCATATTTGCTATAAATTCTTCACTAGACCGAGTTACCTTCGAATTCATGTAAGGACAATACATGGTACACAAGATTATAACTTCAGGTTTGAAAAGGGCGTCCCCTTGGGTTCGCTCGCTCGTTCCATGAATATAACGGATATACCTCACAATAGCATATAA
Protein Sequence: MNHAAAAIPGNMDVDPLSSYEYPVYDSYGAPAYQYPNKLQQSIYDAYQQTSANYMNTQPQEPVTNPPQTSQTPVEVELQPKIEQTEPKPVSKRRKKEKNGQKSTYCSEKITDAAFQFYGCAVCNVSYNALHELDQHVTVHKNRMTSYRLRLRNQFKKKQIKKEKKKLKKLVKIKKETELDIEIKPEDGYIGEEKATDFMNNGVNANENVNSENSSIQDGNSQISSNNDKNSTSNNVQSKERVSPSNVNNENSCVGMNTKDNNMDEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCAVCGQSFITASKLGRHNKRIHLAERYQCRICFKIYSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLRAPPEQGPLGNGDSGTQGSGDSHGPLGPAPAQGAAVWGLPGDELAGVKEEVIDEDQKDLVPKLDILIEEVKVDFEETPVKRELSDDEAPADVGGDAASDVGGDADVGDVKDEDSNSDSDYFPENTWAAPHTRSPPPPALPPAPRRRRASRTCEVCHKSISSASYLRVHMRTHTGERPFKCYTCGRGFITSSKMHRHVLTHAQDKDELKTEIEDTKPEVDDGADEKQEENGDKKPSKKKLKKKSKSLKSKNAEVKPRRKHQKRPHACEFCNQKFLHLNMLEVHKQSHAGEALVLRCHYCLQDAPDEAARKEHEATHTGPKPYLCTICGNTYKKRETMVYHRKRHAPDKEFVCDVCSKRFSAACKLTKHLLTHARERRHVRYECPVCAHLFHTKYHVHMHLSTHQKEGLILEENRNEILAMVLQNARSYPAGPAPPAGQLLPPGELLPSGQVPPSLPPDERSRVCNICGDVFSHFYYLEEHLKSHASRISIDDIDKEEEKKYICSICNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFEKGVPLGSLARSMNITDIPHNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00042898;
90% Identity: iTF_00042127;
80% Identity: -