Alyc033897.1
Basic Information
- Insect
- Agrochola lychnidis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963680765.1
- Location
- OY796869.1:4848944-4859414[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-13 1.3e-10 42.2 0.0 1 37 83 120 83 124 0.92 2 2 3.8e-18 1.7e-15 57.9 0.0 1 43 293 336 293 338 0.95
Sequence Information
- Coding Sequence
- ATGTTGTGGAGGCCGTACGAAGTGTGTTTAAGTTATGAAATGTTATATGCGTGGAGGCTACCGGAGGTGGGCGAGAAGGCGCCGTCGTCTTCGTCCCCCAACCTCGCGGAACAGCCGCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGAACTCCACCTCCTGACTCCAAGCATTTGGATAATAGatTGAAGCGAGCGGTTCTAGAGAGCGCCAGTAACAGTTCTGGTCGTCGCGCGTATACTGAAGAGGAACTCCAGTCAGCCGTCCGTGACATCCAGTCGGGCCGGCTGGGCACGCGCCGAGCCGCCCTCATCTACGGCATCCCGCGCTCCACGCTACGCAACAAACTCAACAAGTTTGGCACCGTCGTCGACCACGTTGACTCCGACAACGACAGCGATGCCGACCGCGCCGACTCGCCCCCCTCCGTCATCCTCAAAATACCTACATTCCCCCCGCCAGACGATAAAAGCCCATCTCCCGCCGGGCAACACCAAGGTTCCATTACGCCAATAACACCGATGCACCCCACGGGTCAAGCCTCACACAAGGGACCCTCACAGCTACTGCTCCCGCCATCCGTGTTCGCCGACCCTCCCTCAACACAACACCTCTTCACGTCCCTCAGTGACGTAATTGCTAAAAGCATTAGCCAGAAGTTCCAGCAACCCTTAGATAGGCCGCACCACCAGCCCAGTGAACTTATGTATGCGCGAGGTCCTGACCGACATGTGTCTGTTATTAAGACTCCGCCTGATAACCAGCGCTACCCCACGCCCGGCAACTCTAAGCAAATGCCCAACAACAACGGCCAGCCGGCTGCCGGCGGCAAGGGCACGCGGCCCAAACGTGGCAAGTACCGGAACTACGACCGCGACAGTCTCGTGGAGGCGGTGAAGGCCGTTCAGCGCGGAGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTCAAGGAGCGCCACCTCATGCGGCCGCGGAAGCGGGAGCCCAAGCCGCCGCAGGACGCCAACAAACCGCAGCCACCAAAGCCGCCGCCGCCGAAGCCGCCGACGAAGCCCTTCTCCAACGGACTCAACGGGCCAGAAGCTCCGGGCTATCCTCCCGGCTACCCGTTCTGGCCCGGCAGTGGGTTCCCGCCGCCGCCCACTCCCGACTTGTACGCCTCGCACATGATGCGACGACTGCGCGAAGAAGCGCCCCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCAGGTCGAGCCTGGAGCGGCCCGCGCTGctgcagcggctggcggcgcCGCCGGGCGACGCGCGCCGGCCGGCGCCGGACGGCGACGAGCCgccggcgcggcgcgcgcggctGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGGCCGCGCTCCGGCACGCCCacgccgccgcccgcgccgcccgccgagccgccgccgccgcccgccgcgccgccggACCGCGCCTAG
- Protein Sequence
- MLWRPYEVCLSYEMLYAWRLPEVGEKAPSSSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLESASNSSGRRAYTEEELQSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGTVVDHVDSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQHQGSITPITPMHPTGQASHKGPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPTPGNSKQMPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDANKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPGDARRPAPDGDEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRSGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00122280;
- 80% Identity
- -