Alyc032412.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrochola lychnidis
Gene Symbol
ct
Assembly
GCA_963680765.1
Location
OY796868.1:1643585-1678469[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.1e-27 7.7e-23 81.7 0.0 3 70 222 290 220 296 0.94
2 3 3.7e-32 9e-28 97.5 0.0 4 77 614 688 612 690 0.96
3 3 5.2e-31 1.3e-26 93.8 0.0 3 75 821 894 819 898 0.95

Sequence Information

Coding Sequence
ATGATCACGATTCATCGCTATGTTTATCCGAACGCCACCGACGTATCATGTCAAAAGTGCATGGACAAGTTCCATATCGCCCAACTAGTGGAAGACGTGCGTCGTCTCCAAGCATCACTTACAGCGCTGCAGGAAGCGCACGCGCAGCAGCTGCAGCGGCTAGAAGAAAGGCTGGACGAGAAGAAACAACACATCGCCAGGCTTGAAGCAAGGCTCGACACACAGAGAGACTATGATGATATCAAAAGAGAAATCAGCATGCTCCGAGCACTTGACCTGGGAGGTGGGGAGCGATCTTTAGAGCGTAAACCTGAGATCCGCTCGCCGAGCACCGCCCCTTCGCTACGAGACCATTCGGCCGAGCGAGAGCGAAGCGCTGAACGCCGGGATACAGGTGTGGAGGAGTGGCCCAGCACGCCGCCGCCGCTCAACAACAACACCACGCACCACAACAACAACGGCCCCACGCCGCTGCTGCCTCTGCCGCCGCCGAGCCCCTTCCGCTTCGAAGAGCACCGCACCTACAGGTTTGCGGAGGACATGGGACCTCTGCCGCCCGGTGCGCTGGTCGGACGCCTCGGCGACTCCCTCATCCCCAAAGGCGACCCAATGGAGGCGCGACTGCAGGAGATGCTAAGATACAACATCGACAAATACGCCAATACTAACCTGGACACGTTGCATATAAGCCGGAGAGTGCGAGAACTGCTGTCGGTCCACAACATTGGACAGAGACTATTTGCTAAGTACGTGCTGGGGCTGTCTCAAGGGACGGTATCGGAGCTGCTGTCGAAGCCGAAGCCCTGGGACAAGTTGACGGAGAAGGGGCGCGACTCGTACCGGAAGATGCACGCGTGGGCCTGCGACGAGGCTGCCATCATGCTGCTCAAGTCACTGATCCCTAAAAAAGttgGGACGAAGGATGGCACCGGCGCAGTGTTTGGTCGGCCGGAGGGTGAGGGTGACGACAGGCTCACGCACGCGATCCTGAGTGAAGCGCATCTGATGAAAACATCCAGCGGACCTCCCCACAACGATGACTCCAGAAGCAATGAGGACTCTAGCTCGCCGAGGACTCAGTGTCCCTCACCTTTCTCCAATAAGGACGGGAGTCAAAACAGAAGACTCAAGAAGTATGAGAACGACGACATTCCTCAAGAGAAGGTGGCGCGCATTTACCAGGAGGAGCTTGCCAAAATCATGACCAGGAGAGTAGAGGATATTCGCCGCGAAGGTTTCCCTGGCGGCGGCATGCCACCACACATGGAGAGGCCACCGGAAGACATCCGCATGGCCCTGGAAGCGTACCACAGAGAACTTGCCAAAATCCAGCCGGCTGGCAATATTCCCAACCTCCACAACTTGCCGGCCATGCCGCCCTTTCCGAACCTCCTCGCGTTGCAACAACAAGCGATGCAACAAGCACAGAACCAACAGATGAACGGCTCAGGAGCGGTCCAAGATCTCTCTTTGCCTAAAGATAAAAACGCCAAAATGAATGGAATGACTGATAGTGATAAGGATAGGTCAATGGATGCCGAAGAGGCTATTAGGCACGCGGGGAGTGCATTTTCGTTAGTAAGGCCAAAACTAGAGCCGGGACAGCAATCAACGGGATCGTCCGCGTCCAGTCCACTGGGGAACGCGATACTACCACCCGCAATTACTCCAAATGAGGACTTCAGTAACTCAGCGGCGGCAAGCCCACTACAGAGGATGGCTTCGATCACGAACAGTCTCATCTCCCAGCCGTCAAATCCTCCTCATCATCCACCTGTACAGAGGTCGATGAAAGCAGTTCTTCCACCAATCACACAGCAACAATTTGATCTCTTTAACAACTTGAATACAGAAGATATCGTGAGGAGAGTGAAAGAGGCTTTGAGCCAGTACTCCATTAGCCAAAGACTGTTCGGAGAATCCGTCCTTGGTCTATCGCAAGGATCTGTGAGTGACTTGCTAGCGAGGCCGAAGCCCTGGCACATGCTCACGCAGAAGGGACGAGAGCCTTTCATCCGCATGAAGATGTTCTTGGAGGATGACAATGCTGTCCACAAGTTAGTAGCATCACAGTACAAAATCGCGCCGGAAAAACTAATGAGGACTGGAAACTACAGCGGAGCACCTCCATGTCCGCCAAATATGAACAAACCCATGCCGCCAACACAGAAGATGATTTCCGACGCGACCTCCCTGCTGAGCAAGATGCAGCAGGAGCAGCTCCTGGGTGCGGGTCACCTGGGGCACCTGGGGCAGCCCACGCCGCTGCTGCTGACGCCGCCCGGCTTCCCACCGCACCACGCCGTCACGCTGCCGCCGCAGCACCACGACAACAACAACAAGGAGCGcaagccgccgccgccgccgcaccaGCACCACCAGCCGCACCACCAGCCGCCCGTCATGCGCaacctgcaccagcacatctcGCCGAGCGTCTACGAGATGGCCGCGCTCACGCAAGACCTAGACACGCAAACCATTACGACCAAAATAAAGGAAGCACTACTAGCTAATAACATTGGCCAGAAAATCTTCGGCGAAGCTGTTCTAGGTCTATCACAGGGTTCTGTCAGTGAATTGCTATCAAAACCGAAACCCTGGCATATGCTCAGCATTAAGGGTAGGGAACCATTCATTCGCATGCAGCTGTGGTTAAGCGATGCCCACAATATTGACCGCCTACAGGCTTTGAAGAATGAGCGACGAGAAGCGAGTAAACGACGACGGTCAAGTGGCCCCGGGCAAGATAACTCGTCTGACACCTCGTCGAATGATACGTCAGAGTTCTACCACTCGAGCTCGCCGGGCCCCACCGCGGGAGCGCCGTGTGCCAAGAAACAACGGGTACTGTTCTCCGAAGAGCAAAAGGAAGCACTCAGATTAGCATTCGCACTCGACCCCTACCCAAACATGCCAACGATCGAATTCCTCGCCGCAGAATTGGGTCTATCATCGCGAACCATCACCAACTGGTTCCACAACCACCGAATGCGGCTAAAACAACAAGCGCCTCATGGCTTGCCGGCCGAACCTCCCGCGCGGGATCAATCCTCAGCGCCTTTCGACCCAGTCCAATTCCGTCTTCTCCTCAATCAGAGACTACTGGAGCTTCAGAAGGAGAGGATGGGTCTCGCTGGCGTACCCCTACCGTACCCGCCGTACTTCGCGGCCAACTCCAACTTAGCGGCGCTAATTGGCCGCGGGCTAATACCCCCCGAAGACCAGGTGAAGGACCAGTCTGGCGGCCTCGACCTCTCGATGCCGCTGAAACGAGAACACGATGGTGATGACTTCGAGGACGATGACGTCGAGAGCAACCTCGGCTCCGAGGACTCGTTGGACGAGGAATCTAAGACTGAGCCGAAGGCGGCGTCGACGCCGCACGCTACAGGTCGATCCAGCAGACGAAAGCCTGCAGCGCCGCAATGGGTCAACCCTGACTGGCAAGATGAGAAACCGCGTAACCCTGACGAAGTGATAATTAATGGAGTGTGTGTGATGCGAAGTGATGACTTCCGGAGAGAGGCGGAGGAGACGGTGCGTGTGGAGCCGTCGCCGGTGGCGCGCGAGGGCTCGCCGGCGGCGTCGCCCGCGCCGCGCACGCCTCACACGCCGCACACGCCGCACACGCCGCTCACGCCGCACACGCCGCACACGCCGCGCCCGCCTCACACGCCTGACGATGTCATCCCCGAAGACAAAATCAAATCCGAGACCGATGACGGCTGGGAGTACTAA
Protein Sequence
MITIHRYVYPNATDVSCQKCMDKFHIAQLVEDVRRLQASLTALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRALDLGGGERSLERKPEIRSPSTAPSLRDHSAERERSAERRDTGVEEWPSTPPPLNNNTTHHNNNGPTPLLPLPPPSPFRFEEHRTYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNIDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTGAVFGRPEGEGDDRLTHAILSEAHLMKTSSGPPHNDDSRSNEDSSSPRTQCPSPFSNKDGSQNRRLKKYENDDIPQEKVARIYQEELAKIMTRRVEDIRREGFPGGGMPPHMERPPEDIRMALEAYHRELAKIQPAGNIPNLHNLPAMPPFPNLLALQQQAMQQAQNQQMNGSGAVQDLSLPKDKNAKMNGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFSNSAAASPLQRMASITNSLISQPSNPPHHPPVQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGAGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPHQHHQPHHQPPVMRNLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEDQVKDQSGGLDLSMPLKREHDGDDFEDDDVESNLGSEDSLDEESKTEPKAASTPHATGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVAREGSPAASPAPRTPHTPHTPHTPLTPHTPHTPRPPHTPDDVIPEDKIKSETDDGWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_01443621;
80% Identity
iTF_00038591;