Alyc020583.3
Basic Information
- Insect
- Agrochola lychnidis
- Gene Symbol
- kn
- Assembly
- GCA_963680765.1
- Location
- OY796859.1:9414766-9422282[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-96 2.7e-92 311.4 0.0 248 387 37 177 29 182 0.97 2 2 3.4e-08 0.00042 20.2 4.0 420 469 186 237 178 348 0.76
Sequence Information
- Coding Sequence
- ATGGCACCGGTAATTGATCGAAAGTTAGAAACATTTGAAGACTTTTCTGCAAACTTCTTCCGAATTACTGAAATAACATTTTTGACAGCAGGTTTGTATCCTCCCCTGCCAGTTGCCACACCATGCATCAAGGCGATATCACCGAGCGAAGGCTGGACGTCGGGAGGGTCGACAGTGATCATAGTAGGGGACAACTTCTTCGACGGACTACAAGTTGTGTTCGGCACCATGTTGGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTGCAGACCCCACCGCGACACATACCGGGCGTCGTGGAAGTAACGCTTTCCTACAAGAGCAAGCAGTTCTGTAAGGGCGCGCCGGGGagatttgtttatgtttCAGCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCAAGACATCCCGGGGACCCGGAAAAATTACCTAagGAAATAATTCTAAAACGAGCGGCGGACTTGGCGGAAGCACTATACTCGATGCCTCGCAACAACCAACTGGGGCTGGGCGCTCCTAGATCACCCCCTGCTAGCATGCCATTCAACTCGTATACAGGACAACTAGCTGTTAGCGTGCAGGATACTGCGGCCTCGCAGTGGACTGAAGAGGAGTACGCGCGCAGTGGCGGCTCGGTATCACCGCGGTACTGCTCTGCCGCGTCGACGCCGCATGCCGCGCCCGCAGCCTACCCGCATCCACAACACTATCCCGCTCCGCCGACCTCACTCTTCAATACCACGTCTCTGTCTCTAGGACCGTACCATCCGGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCCTGGCCGACTGTCCGGTAAACATTCATACAAAATGCACCGGCAGCGATATGAAAGGGGCTCAGAATAAAGAGAGTAAGCTGAGAAGCGCTTTTGCCGTTGTGAGGCAGAGTCCGCCACGGGTAGCCAATGAGCATCATCAGAATTGGCACCACCTCGCAGTTCAGTGTTag
- Protein Sequence
- MAPVIDRKLETFEDFSANFFRITEITFLTAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSLADCPVNIHTKCTGSDMKGAQNKESKLRSAFAVVRQSPPRVANEHHQNWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_00176893;
- 80% Identity
- -