Alyc041662.1
Basic Information
- Insect
- Agrochola lychnidis
- Gene Symbol
- arid5b
- Assembly
- GCA_963680765.1
- Location
- OY796877.1:707286-719540[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5 2.7e+04 -3.0 0.0 39 52 118 131 117 143 0.78 2 2 2e-11 5.8e-08 34.4 0.0 3 85 235 304 233 307 0.85
Sequence Information
- Coding Sequence
- atgaagagatccgcaggagaaccaaggtataAGGATGAAGTCCTAGCCATCAACGACAAGGTAGTCCTCCGCGCAGACGATCTGCTCTCCTGGATGTGCGTGGGCACCGAGTGGCGTTGGGGGCTGAGGGCCGTGTGGCGCGGCGCCTGCGCCCCTCCGGCCGACCTGCCTCGCCACGCGCCGCTTACACACACCAAGTTGGATTTCAGTGATGTTGACACTGAGAAGAGTTCTATTGTGGTGGACGCTGAGGCTCCAGGCGTGGTAGTGTTCTCCTACCCGAGGTACTGCCGCTACAGGGCGCTGATAGCACGGCTGGAAGGCATACAGGCCTCTTGGCTGCGAGACTCCTTGGTGGCAGCTCTGGGAGGGTATGCGGCCCCCACTAATAACACCAGGATATTGTACTGCAAGGACACATTCGAGTACCCCGAGCTGGAAGGCCACGAGTTCGTGTGCAACCACCTGGCGCCGCGCCTGAAGGGCCGCCCGCGCGGGCGCCGGCGCCGCGCGCACACGCCCGACGCCGCGCACGCCGAGCGCGCCAGCGACCGCTCCGACTCCGACGACCCGCCCGCCACCGGACCCGCCCATAGTAGTGACCCGTCGACCCCCCGCCGCCTGTCCCTCCGCAACGGCGCCCCCCCTCCCAGCGACGAGGACGAGGAGGAGTACAAAAGAATAGAGCAGACCCCCGAGGACAGAGCCTTCCTCCAGACACTGAAGATGTTCTACAAGAGCAGGAGTGAACCCTTCAAGAGTGGACACACTCTGAAACACTTATCTCTGCGCGTCCTGTACCTGTCggtggcggcgcgcggcgggtACGAGGCCGTGTGTCGCCACAAGCTGTGGCGCGCCCTCGCCCGCGACCAGCCCGCCCGGACCAGGAGACACTATGAGAGGTATGTAGatgtgtggcgccatctacatcggCGGGTACGAGGCCGTGTGTCGCCACAAGCTGTGGCGCGCCCTCGCCCGCGACCAGCCCGCCCGGACCAGGAGACACTATGA
- Protein Sequence
- MKRSAGEPRYKDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHAPLTHTKLDFSDVDTEKSSIVVDAEAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHTPDAAHAERASDRSDSDDPPATGPAHSSDPSTPRRLSLRNGAPPPSDEDEEEYKRIEQTPEDRAFLQTLKMFYKSRSEPFKSGHTLKHLSLRVLYLSVAARGGYEAVCRHKLWRALARDQPARTRRHYERYVDVWRHLHRRVRGRVSPQAVARPRPRPARPDQETL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00784985;
- 90% Identity
- -
- 80% Identity
- -