Alyc002793.1
Basic Information
- Insect
- Agrochola lychnidis
- Gene Symbol
- JARID2
- Assembly
- GCA_963680765.1
- Location
- OY796848.1:3361344-3383421[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2 2.1e+04 -2.6 0.0 3 36 756 783 754 806 0.68 2 2 2.5e-20 7.3e-17 63.0 0.1 13 89 927 1000 916 1000 0.90
Sequence Information
- Coding Sequence
- atgatCGCACAAGTTATTTTCCAAACTGCAGTAAGGCAGATTAGGGCACGTTCTCGCCGCGTTCAAGCGCAGCGCAAGTTTGCGCAGGGCGCTTACGTGCCGCCGAATGTTGTCGCCGTCGCTGCTACTGACAACCGGCGGGACGCTGCGCAAGATCCAAGAAATGTTACCATAAACAACGTAACGGCTACGGGCTTATTGGACGTCGTGTCTCTACAGAGTCACTCCCATTTGACTTCACAACCTGTAGTGATCCTTGAGAGGCTACGCGGCGGGATCCCGGCCAACGACGTGCCGCCGCCCTCGCAGTGCGAGCCTAAACCACGACACTTGGAAAACCCTCATGAACGTAGGCCGCCAAAGTTGCagactataaaaaaaaagaaagataaacCAAATCATCCTATGTTGCTAAGAAGTCGGCGCCTGAGCAAGCTTGAATTAAACAACGTAGTAGCGGAAAGTTGTGCTCCTCTCAGAAAGACGGCCTCGAAGCCCAAGAAGAATTCTTCTGACGAGGATGAACCCCTCATATTCCAGAAAACTCGCCTAAAGCAGAAAGCAAAACAACTGAGCACTTCAAAACAGACCGCTGCAAGGGATAGTGCTCCCATGAAGAGGGTTCTGCAGAAGAGTATTTCTAATAAATTCTCTCCTAAGCAGACTGCGGATGTCGCACCAGAGTTCACCGTACCAGATTTCTTAAGCACAGTCATCGAGGAAGACCTCACGGTTGAAACGGTCGTTCAGGACTGTAAGGCAGACATGGTCACCCCAGATGACTCGGATATCGTTATGCAGGATGTCTCGAATGTTCCGATGGTGTTGGATAATGAGGAGGAAAGCCTCCCGTTTGTTGGTATTTTGGACGACGTACTGGCGCCTTTAGATGCGGTGTTCGCGGAGGAGCATATTAGTGTCTCGGAGTTAGATGAATTGGTGAATTTACATGATGTACCGATGGTCAACGATGATGATCCGGAGGTCCCGGATGATGTATCGGTGGTTTTGCATGATGTGCCGATGATGAACAATGATTTACCGATGGTCAACGATGATGTTCCGAATGTCCCAGATGAAGTACCGGTGATTTTGCATGATGTACCGATGGTCAGCAATAATGTTCTGGAGGACACGGGTGACCCAGATGTCCCATTGATCAAGAGTGCCATGATGATTGAGGATGACGTTATGGTCCACAAAAATATCCCCCGATCCACCGATTATCCGATTACGACGCTACGAATAGCTTCTCCAGAATACAATTCTAGCTCCAAAGAAAACGACGCGATCTGCACTGATCACTTAGGAAGTGACGCGGATGAGCCTTTCGTTGAAGAAATCTTGCAAAATACAACAGACAATCTTGGTCAAAATGTGCAGTTCGAGGTATCTACTACTTGCGTCGCGGCAGAGTGGCGCTCTGACCAGGACGTCATAAACGCTTCTCAGGAATTACTGGACTCACGGTGCAAAGTGTGTAAGCCCTGCATCAGGATTGAAAAACTGATGAAAGTTTCAACTTTACTAAAATCTCAAATTGAATTAACGAGCATAGGACAGGAAAACATGGTCGCGGTTCTAGAGAGCGAACCAACGGAAAGAGAAGGTGAAACAGAAGACGTTGAAATAGACAACGAAGACGCGGATTCGACGAACAATGACCAAGATCATCTTTACTTGCTATTACCAAAACATTCTAGTGTAATGCTGAAATTAGGAACCAGCATGGTACACGGCAAAGAGGTCTTGGGGGTTCGTTTGATGCCGAGAGATCATTCTCTGAAAAACAAACAAGAGTTCTCACTTGAAGAGCGAGAACATTTACTTGACCAACTTATTGAGACCCTGACGATCGGTCGAGACGTCGATTCGATGGAGCGAAACGAAAACACAGAGCTTCCAAACGTCAACACAGAGGGTCGAAGCGACAATTTGGTGGAGCGAATCGAAATCACTGAGCTTCCAAACGTCAACACAGAGGGTCGAAGCGACAATTTGAAGGAGCATAACGACATTCCAAAGAGTCGAAGCATAAGCATATCATCCGACAGCACTGTTGAGATGAGCGATGCTACTACTCATGATCAAAGAGCGCCGATCCGCCTTACAGCCGAAACAAGAAAACGAAATCGTTTAGCTGTTAAAAAGAAGTTAGCTGAAGCAGAGCTGATGCACGACCGCATCAGAGAGGAAAAGGAAAGAGAGATTGCCCGTCTCGAGGAAGAGAAGAGACAGGAAATCTCACGGATTACGGCGgagaataatatttttgtcgCGGAGATGTCCCGCTTCCACGAGCGGTTTACCCAGATGGAGAAGGAGAAACAAAGAGATTTTGCACGCCTCAAGGTGGAGATCAGAGCAGAAGTGATATCAAAAATAGAGGCTAATCGTCGTATGTGCGCTGAAGTCGACGGCATGGCGGCGGACCTTGCCAAAGAAAAGGATGCCAAGAAAATGTATCCGGAAGAACTTTCAGATCTTGATGCGCCTGGCACCAGCAGCTCCATGTTGACAACGAATGGCGGGTTGTTAGTAGACGCTCCTGTATACCACCCCAGCGAAGAAGATTTTCGTGATCCACTTCTCTACTATGAGAAGATCTGGCCAGAAGCAGTTAGATATGGCATCTGTAAGGTGGTGCCCCCTCCTGGTTGGAAGCCAAGTTTTCGAGTGCATGACGAAATGAGGTTCGATGTTACGAACCAATACATTTCGCGGCTGTTCAACCGCTGGGGACCGGCCGCGAGAGAACTTTGCGCTATTAAGTTGTCGCTCGCGCAACAAAAAGTTAACTTTACACGAGCACCATTGCTAGATGGTGTCGAGGTAAACTTACCAAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACAGTATATAACAAAAAGCGATGGAGCAAGGTCGCAGAAGATATGAAATTTAATAAAGGACCTAATACTGAGAGAAAACTCGACCAGATTTACGTAAAGTATCTGCTACCATACGACACGCTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCGAAAGAATCAAAAACTTTTGGACCGCGCAGTGAACCCTCTAAACCGCCAGAAGCGATTGCTTGGCTTGATGGACTCTTCTGACGATGAGACAGAAGACGAAGACACGGTGGCCGCTGTCAATGAGGCAGAAGACTGCATCATCAAGGGCGCGGTCATGAACCGTGCTAAATTCAAAAAGGTAGCCACATCACTTACACTCAACTGCATGTTCATGGTAACTATTTCACATTGA
- Protein Sequence
- MIAQVIFQTAVRQIRARSRRVQAQRKFAQGAYVPPNVVAVAATDNRRDAAQDPRNVTINNVTATGLLDVVSLQSHSHLTSQPVVILERLRGGIPANDVPPPSQCEPKPRHLENPHERRPPKLQTIKKKKDKPNHPMLLRSRRLSKLELNNVVAESCAPLRKTASKPKKNSSDEDEPLIFQKTRLKQKAKQLSTSKQTAARDSAPMKRVLQKSISNKFSPKQTADVAPEFTVPDFLSTVIEEDLTVETVVQDCKADMVTPDDSDIVMQDVSNVPMVLDNEEESLPFVGILDDVLAPLDAVFAEEHISVSELDELVNLHDVPMVNDDDPEVPDDVSVVLHDVPMMNNDLPMVNDDVPNVPDEVPVILHDVPMVSNNVLEDTGDPDVPLIKSAMMIEDDVMVHKNIPRSTDYPITTLRIASPEYNSSSKENDAICTDHLGSDADEPFVEEILQNTTDNLGQNVQFEVSTTCVAAEWRSDQDVINASQELLDSRCKVCKPCIRIEKLMKVSTLLKSQIELTSIGQENMVAVLESEPTEREGETEDVEIDNEDADSTNNDQDHLYLLLPKHSSVMLKLGTSMVHGKEVLGVRLMPRDHSLKNKQEFSLEEREHLLDQLIETLTIGRDVDSMERNENTELPNVNTEGRSDNLVERIEITELPNVNTEGRSDNLKEHNDIPKSRSISISSDSTVEMSDATTHDQRAPIRLTAETRKRNRLAVKKKLAEAELMHDRIREEKEREIARLEEEKRQEISRITAENNIFVAEMSRFHERFTQMEKEKQRDFARLKVEIRAEVISKIEANRRMCAEVDGMAADLAKEKDAKKMYPEELSDLDAPGTSSSMLTTNGGLLVDAPVYHPSEEDFRDPLLYYEKIWPEAVRYGICKVVPPPGWKPSFRVHDEMRFDVTNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRAPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWSKVAEDMKFNKGPNTERKLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRAVNPLNRQKRLLGLMDSSDDETEDEDTVAAVNEAEDCIIKGAVMNRAKFKKVATSLTLNCMFMVTISH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -