Alyc043087.1
Basic Information
- Insect
- Agrochola lychnidis
- Gene Symbol
- -
- Assembly
- GCA_963680765.1
- Location
- OY796878.1:2338661-2339290[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-21 9.6e-18 65.8 0.1 14 89 32 104 8 104 0.90
Sequence Information
- Coding Sequence
- ATGAGGTTCGATGTTACGAACCAATACATTTCGCGGCTGTTCAACAGCTGGGGACCGGCCGCGAGAGAACTTTGCCCTATTAAGTTGTCGCTGACGCAAAAAAAAGTTAACTTTACACGAGCACCATTGCTAGATGGTGTCGAAGTAAACTTACCGAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACAGTATATAACAAAAAGCGATGGAGCAAGGTCGCAGAAGATATGAAATTTAATAAAGGACCTAATACTGAGAGGAAACTCGACCAGATTTACGTAAAGTATCTGCTACCATACGACACGCTTTCTCCTCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCGAAAGAATCAAAAACTATTGGACTGCGCAGTGAACCCTCTAAACCGCCAGAAGCGATTGCTTGGCTTGATTGACTCTTCTGACGATGAGACAGAGGACGAAGACACGGTGGCCGCTGTCAATGAGGCAGAAGACTGCATCATCAAGGGCGCGGTTATGAACCGTGCTAAATTCAAAAAGATTGCCACCATAACGTACGAGAACACATTCGGACAAAGCTCGGAGGCCGCCGACCCTCCCGAATTCTTCCTGAGCGAGTAA
- Protein Sequence
- MRFDVTNQYISRLFNSWGPAARELCPIKLSLTQKKVNFTRAPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWSKVAEDMKFNKGPNTERKLDQIYVKYLLPYDTLSPQERQDIMRKVEIAWNRKNQKLLDCAVNPLNRQKRLLGLIDSSDDETEDEDTVAAVNEAEDCIIKGAVMNRAKFKKIATITYENTFGQSSEAADPPEFFLSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00038472;
- 90% Identity
- iTF_00038472;
- 80% Identity
- -