Alyc040077.1
Basic Information
- Insect
- Agrochola lychnidis
- Gene Symbol
- cnc
- Assembly
- GCA_963680765.1
- Location
- OY796875.1:5269360-5299126[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-13 9.2e-10 39.8 5.0 3 62 423 482 421 489 0.80
Sequence Information
- Coding Sequence
- ATGCGCTCGATGTCAGTGGAACAACGCTGGCAGGACCTGGCCTCTCTGCTGACCATcccgcccccgccgcccccGGACCAGTACCAGCACTACCACCATCACCATCATCACCAGCACCCGCACCCGCACccgcatccgcatccgcatccgcatccgcataatATTACCGCCCACGGTGCGGCGGGCGGCTACGGTCCGAACTACCATGCCCCTATACCACCGGTCCCCGAAAAGCACCCGGAAGCTTATGGTGGCGCGGCAGCTCCTCTCGATGGCGCGTACAAGGTGGAGGCCGCGCAACATCCGCAACAGCATGATCCACTCTACTATCAGAATGCTTCAGGGGAGATGGCGGCTGGCCCAACCAACCAAGACGGGTTTCTCCAATCCATTCTGAACGACGAGGATCTGCAGCTCATGGACATGGCTATGAACGAAGgCATGTACACGATGCGAATGCTGGACGGTGCCAGCGCACACCATGCCCCACACCACAACCATTCTCACATGATGATCACGGAGCGGGACTCGGCATCTGACAGTGCAGTCTCTTCCATGGGATCTGAGCGTGTACCCTCGCTCTCTGATGGAGAATGGTGCGACGGCAGTGACTCTGCGCAGGAGTTCCACAGCTCAAAATTCCGGCCATACGACAATTCATTTGGACGTGAACGCGCTGCACCTCACCAGGCGCAGAAAAAACATCATATGTTTGGGAAACGATGCTTTCAGGAGCAACCGGCCCCTGCCTTAGACCCGGTCGGCAGACCAGGGGTCGTGAAGTACGAGTGCCCGGAACAGACTTACCATCATGATAACATGCATATGCATAACGTAGACTTCACCCCCCGGCCGCAGTTGCCCCCGCCACACGTCACGAACATCCACGGCCCAGCTCTCGACCTCAACACGGCGCATTCGAGCCATGCCTTAATACAGAGCAACATCCCAAGCCCGGCGCCGCCCCGGTTCGCGTACGCCACCCCGGAGCGCGTGCGACACAACCACACCTACAGCGCGCCGCTCGCGCCCGCCGACCTCAGGCCCGCCGCCGTGCGGGACAAGAGAGTCCGGCGACTGACCGACGGCAGCATGTCAGACGGCGGCTCGTCTGCCACCAGCAGCGGACAACATTTGTCGCGAGACGAGAAGAGGGCCAAGGCATTAGGCATACCCCTGGAGGTGCAGGACATCATCAACCTACCGATGGATGAGTTCAACGAGCGGCTGTCGAAGCACGACCTGAGTGAGGCGCAGCTCTCCCTCATCAGGGATATTAGGAGGCGTGGGAAGAACAAGGTCGCAGCTCAAAACTGCCGCAAACGGAAACTTGACCAGATCACGTCGCTGGCCGACGAGGTCCGCACCGTGCGAGACCGAAAGATTCGCACCCAACGGGACCACAGCTCTCTGATCGCGGAGAGGCAGCGCGTGAAGGAACGCTTTGCAGCCCTATACCGCCATGTTTTCCAGAACCTGCGCGACCCTGAAGGCAGACCGCTGTCCTCCCAGCAGTACTCGCTGCAACAGGCAGCCGATGGCAACGTGGTGCTCGTACCCAAGATGCCACAGCACCAAGATCACCCAATGAACCGCACAAACGATGATGAAATGGACCGGAAAGCTAAAAGTTACGACCAGTGA
- Protein Sequence
- MRSMSVEQRWQDLASLLTIPPPPPPDQYQHYHHHHHHQHPHPHPHPHPHPHPHNITAHGAAGGYGPNYHAPIPPVPEKHPEAYGGAAAPLDGAYKVEAAQHPQQHDPLYYQNASGEMAAGPTNQDGFLQSILNDEDLQLMDMAMNEGMYTMRMLDGASAHHAPHHNHSHMMITERDSASDSAVSSMGSERVPSLSDGEWCDGSDSAQEFHSSKFRPYDNSFGRERAAPHQAQKKHHMFGKRCFQEQPAPALDPVGRPGVVKYECPEQTYHHDNMHMHNVDFTPRPQLPPPHVTNIHGPALDLNTAHSSHALIQSNIPSPAPPRFAYATPERVRHNHTYSAPLAPADLRPAAVRDKRVRRLTDGSMSDGGSSATSSGQHLSRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKIRTQRDHSSLIAERQRVKERFAALYRHVFQNLRDPEGRPLSSQQYSLQQAADGNVVLVPKMPQHQDHPMNRTNDDEMDRKAKSYDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00039525;
- 90% Identity
- iTF_00757890;
- 80% Identity
- -