Basic Information

Insect: Agrochola lota
Gene Symbol: -
Assembly: GCA_947364205.1
Location: OX376248.1:7505686-7523654[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.2 2.4e+02 3.0 1.8 1 23 385 407 385 407 0.96

2 11 0.0031 0.24 12.4 8.8 1 23 414 436 414 437 0.94

3 11 0.34 26 6.0 3.2 1 23 441 463 441 463 0.97

4 11 0.094 7.1 7.8 2.0 1 23 468 491 468 491 0.97

5 11 0.0034 0.26 12.3 0.2 1 23 495 518 495 518 0.94

6 11 1.5 1.1e+02 4.0 0.4 3 21 532 550 531 555 0.91

7 11 1.4 1.1e+02 4.0 0.4 2 23 611 633 610 633 0.94

8 11 0.01 0.78 10.8 0.6 2 20 649 667 648 670 0.91

9 11 2.4e-05 0.0018 19.0 1.4 1 23 676 698 676 698 0.99

10 11 4.3e-05 0.0032 18.3 4.5 1 23 705 727 705 727 0.97

11 11 3.5e-05 0.0027 18.5 1.3 1 23 733 756 733 756 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.2	2.4e+02	3.0	1.8	1	23	385	407	385	407	0.96
2	11	0.0031	0.24	12.4	8.8	1	23	414	436	414	437	0.94
3	11	0.34	26	6.0	3.2	1	23	441	463	441	463	0.97
4	11	0.094	7.1	7.8	2.0	1	23	468	491	468	491	0.97
5	11	0.0034	0.26	12.3	0.2	1	23	495	518	495	518	0.94
6	11	1.5	1.1e+02	4.0	0.4	3	21	532	550	531	555	0.91
7	11	1.4	1.1e+02	4.0	0.4	2	23	611	633	610	633	0.94
8	11	0.01	0.78	10.8	0.6	2	20	649	667	648	670	0.91
9	11	2.4e-05	0.0018	19.0	1.4	1	23	676	698	676	698	0.99
10	11	4.3e-05	0.0032	18.3	4.5	1	23	705	727	705	727	0.97
11	11	3.5e-05	0.0027	18.5	1.3	1	23	733	756	733	756	0.95

Sequence Information

Coding Sequence: ATGAGGTGTTGTGTGCCCAGCTGCAAGAATGATTCGAGACACATATCTAAATCACAGGGAATCACGTTCCATGTCTTCCCCAATGAGTCATCACTCCGTAAATCCTGGCTCAAGGCCCTCGGTAAAGAATCTTGGGAACCGAGGGAAAGGAGTGCGGTGTGCTCTGAGCATTTTTTGTGTGAAGACTTGTATGAAACTAAGAGTGGGTTACGGAAGGTTAGAGCTGGAGCTGTGCCTTTGATTGTCCAGGATTCCTCAAACTGTGATTATGGTGAACCTGCCAGTTTGAAGGCTTGCAGAATTTGCCTAGTAATGGATGTTAAATTAATTCCAATAAGAATATATAAACTGGAACAAGCATATGAAAATCTCAcaggaatatctCTAAGTGAAGAAGACAAATTACCACAGAAGTTATGCCTGGAATGCGTACAAAGATTAATGAACTGCAGTCGATTCAGGCTCAAGAGTTTAAGAGCTAACTCCCTTATGCTAGAGGTTATTAAGAAACAGGATTGTTTAACCGTCCAAAATATAAAAACAATTAACCGGTTAAATAACCAATTAACATCAACATTATCGCAGAAACATTTCGAAGTAAACCACTACGATTCCTACATAGAATCCGAAGACCAACCAATAACAATTCAGGATAAATCTTCACCTACATGCAATGTAGATATAAAATTAGAAAACGAAATTTTTCTCACGGAAGAAATCACAGATAAAAATGACCACGGATTTAACGACGACGGACTTAATGACGACGGACTTAACGACGACGGACTTAACAACGACGGACTTAACGATCACGGAATTACGGATGTTTTGAACGATAAAGATGACATTTCTGAAAAAGAATACGTGTTGTCTGAAAAAGATAACTACTCTTCGGATGACAGTCTTCCTTTAGAAAAATGCAAGACAAAGAAAACGAGAAAAAGAAAGGAGAAAGAAAAAAAAACGGTTAAAACCGTTAAGAGGGTGAAAAAGATAAAAGATCCGACGGAACCAAAGATAGATAGACGAAGAAAACCGTTTTTGAACGACGATTTGAATGAAACTCTTTTTACAATCACTGATCTGACATTTGAAGAGCAAATCGCTGAGATAGTGAAAAGACAGGATAGTTCCAATTATAAGAATTCTGTTTTTAAATGTACTGCGTGTTTCAAAGGGTTTCTGGATGAAGATGCTTACCATAGCCATGTGACTCGGCATACAGATCAATGCGGCGAACACGAATGCGAGATCTGCAAGACGCACTTCAAACACCCGCATGCGCTCCGAAAGCATATCACAGCGCACCACACTCAGAGGTTCAGCTGTAAACAATGCACCTACGTCACAACCCATAGACAAACGGCCAGGCTACACGAACGGTGGCATAAGGGCACTAAGTATAGGTGTCCGCATTGTCAAGATGAGTTCGTTAAATTCACCACCTACATGGGCCACATCCGTATCAAGCATCCCTCGGACTTCGTGTGCGAGCTTTGTGGATACTCCTTCGTCAGTGCGAAGGGCATAGAGCTGCACAAGAAGCTTAAACATCGGCTGGAGAACGTACAGATACCAGAAGATGGTCCGTTGTGTGAACTGTGTAACGTTAGGTTCGTGTCATCAGAGGCTCATAGACGACATCTTAGTGTGTCTGCTCGACATAATACAGGTACAGACAAAGATTCAAGAGAATCAAACAAACCTAAAAAGGGCAGGAAGTCGAAAGAATGCAAGGAGCTCGAACGAAGGGCGCGAGAGAAGGACAAAGACTCCGATGAAAAGAGACGGATATATCCCAGTCAGATGCGCAAGGCGGAAGGACCTATACCGTGTGAACAGTGTGGTCTGCAACTAGAAGATTCTCGGGCGTATCACGGCCACTTCAGACGAATGCACCCGGACAAGAATCGAACCAACTACCCCTCGATGAAGTCACCATGCATGTGTGAAGTTTGTGGCAGAATGTTCCAAAGCTACGCCCTCCTAAAGGACCACACGTGGGTTCATACCGGCGAACGTCCCTTCAAATGCGACTCCTGCGGCAAGTCATTCAGAATGAAACAACGCCTCGTCGCACACAGGAGGGTGCACAGTCAAGTGCGCGCCAGCTACGTGTGTGCGCTGTGCGGGAAGCACTTCTCGACGCACAGTAACCGGCAGAGGCACATGTTTATCCACACCGGTCTAAAACCGTTCAAATGCGAGATGTGTGGCAAAGGTTTCAAGCACGCGAGTGAAAAACGAGCTCACATAACATACGTACATCTCAAGAAGCCGTGGCCGAAGCGCGCTAGGGGGAAGCGAAGACCTGACACTAGACAGGGCCAGATACCCCAAGATCAGGACATGGACATGCAGACACCCATGTGGCCCCCCTGCGACCCCAAGATGGGAGACATGGGGCCCATGATTGAGGACAAACCCGTTTACTATAATTTGAAGATTTAA
Protein Sequence: MRCCVPSCKNDSRHISKSQGITFHVFPNESSLRKSWLKALGKESWEPRERSAVCSEHFLCEDLYETKSGLRKVRAGAVPLIVQDSSNCDYGEPASLKACRICLVMDVKLIPIRIYKLEQAYENLTGISLSEEDKLPQKLCLECVQRLMNCSRFRLKSLRANSLMLEVIKKQDCLTVQNIKTINRLNNQLTSTLSQKHFEVNHYDSYIESEDQPITIQDKSSPTCNVDIKLENEIFLTEEITDKNDHGFNDDGLNDDGLNDDGLNNDGLNDHGITDVLNDKDDISEKEYVLSEKDNYSSDDSLPLEKCKTKKTRKRKEKEKKTVKTVKRVKKIKDPTEPKIDRRRKPFLNDDLNETLFTITDLTFEEQIAEIVKRQDSSNYKNSVFKCTACFKGFLDEDAYHSHVTRHTDQCGEHECEICKTHFKHPHALRKHITAHHTQRFSCKQCTYVTTHRQTARLHERWHKGTKYRCPHCQDEFVKFTTYMGHIRIKHPSDFVCELCGYSFVSAKGIELHKKLKHRLENVQIPEDGPLCELCNVRFVSSEAHRRHLSVSARHNTGTDKDSRESNKPKKGRKSKECKELERRAREKDKDSDEKRRIYPSQMRKAEGPIPCEQCGLQLEDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCEVCGRMFQSYALLKDHTWVHTGERPFKCDSCGKSFRMKQRLVAHRRVHSQVRASYVCALCGKHFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKHASEKRAHITYVHLKKPWPKRARGKRRPDTRQGQIPQDQDMDMQTPMWPPCDPKMGDMGPMIEDKPVYYNLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00038854;
90% Identity: iTF_00746209;
80% Identity: iTF_00037887;