Basic Information

Insect: Agrochola lota
Gene Symbol: -
Assembly: GCA_947364205.1
Location: OX376246.1:2844949-2851143[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.26 20 6.4 2.5 1 23 384 406 384 406 0.95

2 9 2.2e-06 0.00016 22.3 0.9 1 23 453 476 453 476 0.97

3 9 8.6e-05 0.0065 17.3 0.7 2 23 482 503 482 503 0.97

4 9 1.4e-05 0.001 19.8 3.4 1 23 511 533 511 533 0.97

5 9 1.8e-05 0.0014 19.5 1.1 1 23 538 560 538 560 0.96

6 9 2.6e-06 0.0002 22.1 1.4 1 23 569 591 569 591 0.99

7 9 1e-06 7.9e-05 23.4 0.5 1 23 597 620 597 620 0.97

8 9 0.09 6.8 7.8 0.8 1 14 626 639 626 649 0.79

9 9 4.4 3.3e+02 2.5 4.3 1 23 657 680 657 680 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.26	20	6.4	2.5	1	23	384	406	384	406	0.95
2	9	2.2e-06	0.00016	22.3	0.9	1	23	453	476	453	476	0.97
3	9	8.6e-05	0.0065	17.3	0.7	2	23	482	503	482	503	0.97
4	9	1.4e-05	0.001	19.8	3.4	1	23	511	533	511	533	0.97
5	9	1.8e-05	0.0014	19.5	1.1	1	23	538	560	538	560	0.96
6	9	2.6e-06	0.0002	22.1	1.4	1	23	569	591	569	591	0.99
7	9	1e-06	7.9e-05	23.4	0.5	1	23	597	620	597	620	0.97
8	9	0.09	6.8	7.8	0.8	1	14	626	639	626	649	0.79
9	9	4.4	3.3e+02	2.5	4.3	1	23	657	680	657	680	0.94

Sequence Information

Coding Sequence: ATGTTGCACAACACAGGGCATTATGGTCCGAACGAGGCGCCGATTAACATGGGAACGCCCGTTAATATGACACCAATGAGTGGTCATATGAATATTACTCATAACATTAATAATTTGAGTAAAGTAGCCCACCAAGGCATCCCATCACCTAGCGGGCACTACAACTTACCGGACTATGCACATTACAACCACTCTCCAATAGGTATGCCGTCGCAAATTGGTCAGTTTCCCAACTATCAACAACTGGGTTTCCAACATTCTTATATGAATCAAAATGCAAATAATATGAACGATTTACCATTCCCAAACAGTATGTTTCCTATGAATTTAAATATACAGAACGAGCATAACGCTAATGTGATGAATTATGCTTATGATAAGAGAGTTATTGAGTCAGCGAGGCAGGAACACTTTAAAGAGCAGAATATGCGAAAAATGCCGTTGAACATACCTCAAATACCAAATAAACAGTACAACAAACACATTAGCGGGAACAATGACTTCATACACACCAATATGTATGAAGAAACTCAACATAATATAGATTTAAGCATGAAAACTCATGATAAATTACAAATAAACAGTACAAGACGGAAAAACATTGAAAGTACGGTAAAATTAATTGAAAATATTCTTATTCACTCGTCAAATAAACCTAAGGAAGTAGCTGAAATGATTCCCATAATACCAAATACCACAAACACTGACATTCCATCAGATATGACAGTTAACGTAATGAAAACATCAACCAATTACCTGGACTCAAATACGGACCCATTAGCACAATCACCACCCGACTTAACAATCAACGAACCAAATAAGGACAATGTTAAACTAAATCCAACAGAAAATAACAGTAGTGATAAAGGAAAAGCAGAAAATGACATGTCATCGGATGATGAAGAATTAAAACCTACAGGAATCACTCAACACTTCATAAGTGAAGACGCAGAAGTGACGACCGACAATAGTATTGTTATAAAGGTTGAGAAAGCAAGCTGGGCGGACTCCGAATGCTTCACGCCGTTCTTGAAAGACTGTCATGGGTTTGAGAGGGACGAACACATGAATTATAGAATTATTGAAGGTGACTGTAGCATTGCCGAAGCGGTTACTTCTTATAAAAATGACATAAAACCAGAAGGAGTATTTGAATGTCCGCACTGTGCACTCCTCTTCAAACACCCAAAAAGATTTATAATCCACAATAAATGGCATACATTCGGCCTAACGAACATTAAAAGAATGGAGATCGCAAAAGTAAGGGAACAAAAGAGGTTTGAAAGAAAAGAGGCGAAGATTATAGAGCGAATGAACTCTAAAGAGGTTACAGATATTAAGGTGGACGGAAAGGTGTTTCCGTGTAAGGATTGTGATAAGGTGTTTAGTGCTAAAGGCAGCTTAAAGAATCATAGGCAAAGAACACACCCAACCCGCATAAGAGAGTGCAAAATTTGTCACAAAGTAATATCAAGCTGGACGGCTCTTCGAACGCACTTAGCGACCCACTCAGCGGATTCGGGTTTCGGCTACCAGTGTAGCGACTGTCCTAAGAGGTTCAAGTACTCGCACTCGCTGGCTAAGCACTCTGATACTCACTTGGAAAAAGTCCATGCGTGCATGGAATGCCCCAAGAAGTTCGGCTCACAAGCTCTCCTGAAGATGCATATGAAGACTCATGAGCGAATGTTGCGCGGCGCCACGTATAGATGTACTTACTGCGGGAAAGGATTCTTTGAGTCGTATAGTTTACAGGTACATGAAAGAACACATCGTAATGAGAGACCTTACGCTTGTGACATTTGTAACACAAGCTTCGGGACTAACTCTAGTCTCAAGAGACATTTGAAAGTGTCCCACAACACAGCAAAGCCCCATCAGTGTAATATTTGCCGGCGCAACTTCTCAACGGAATCCATCAGGGACAGGCACGAGCTGAGGCTCCATGGAAACCCTGAAGACTTCAAGTTTCCATGCAAACAGTGTTCTTGCAAATATTTAAAACTAAAAGATCTTCAAAAACACGTCTACAAAATGCATCCCAAAGGCAAGAGGAAGAAAAAGGTGCAAGTAAGCGATTCGGAATAG
Protein Sequence: MLHNTGHYGPNEAPINMGTPVNMTPMSGHMNITHNINNLSKVAHQGIPSPSGHYNLPDYAHYNHSPIGMPSQIGQFPNYQQLGFQHSYMNQNANNMNDLPFPNSMFPMNLNIQNEHNANVMNYAYDKRVIESARQEHFKEQNMRKMPLNIPQIPNKQYNKHISGNNDFIHTNMYEETQHNIDLSMKTHDKLQINSTRRKNIESTVKLIENILIHSSNKPKEVAEMIPIIPNTTNTDIPSDMTVNVMKTSTNYLDSNTDPLAQSPPDLTINEPNKDNVKLNPTENNSSDKGKAENDMSSDDEELKPTGITQHFISEDAEVTTDNSIVIKVEKASWADSECFTPFLKDCHGFERDEHMNYRIIEGDCSIAEAVTSYKNDIKPEGVFECPHCALLFKHPKRFIIHNKWHTFGLTNIKRMEIAKVREQKRFERKEAKIIERMNSKEVTDIKVDGKVFPCKDCDKVFSAKGSLKNHRQRTHPTRIRECKICHKVISSWTALRTHLATHSADSGFGYQCSDCPKRFKYSHSLAKHSDTHLEKVHACMECPKKFGSQALLKMHMKTHERMLRGATYRCTYCGKGFFESYSLQVHERTHRNERPYACDICNTSFGTNSSLKRHLKVSHNTAKPHQCNICRRNFSTESIRDRHELRLHGNPEDFKFPCKQCSCKYLKLKDLQKHVYKMHPKGKRKKKVQVSDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00071769;
90% Identity: iTF_00746099;
80% Identity: -