Alot018587.1
Basic Information
- Insect
- Agrochola lota
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947364205.1
- Location
- OX376242.1:4089289-4099868[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-13 7.9e-11 41.9 0.0 1 39 83 122 83 127 0.90 2 2 2.5e-18 8.5e-16 57.9 0.0 1 43 293 336 293 338 0.95
Sequence Information
- Coding Sequence
- ATGTTATGGAGGCCGTACGAAATGTGTTTAAGTTATGACATGTTATATGCGTGGAGGCTACCGGAGGTGGGCGAGAAGGCGCCGGCGTCTTCGTCCCCCAACCTCGCGGAACAGCCGCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGAACTCCACCTCCTGACTCCAAGCATTTGGATAATAGATTGAAGAGAGCAGTTCTAGAGAGTGCTAGCAACAGTTCTGGTCGTCGCGCGTATACTGATGAGGAACTTCAGTCAGCCGTCCGTGATATACAGTCGGGCCGGCTGGGCACCCGCCGAGCTGCCCTCATCTACGGTATCCCGCGGTCCACGCTACGCAACAAACTCAACAAGTTTGGCACCACCGTCGACCACGCTGACTCCGACAACGACAGCGATGCCGACCGCGCCGACTCGCCCCCCTCCGTCATCCTCAAAATACCCACATTCCCCCCGCCAGACGACAAAAGCCCATCCCCCGCTGGACAACACCAGGCCCCGATCGCGCCAATAACACCGATGCACCCCACGGGTCAAGCCTCACTCAAGGGACCCTCACAGCTGCTGCTCCCACCCTCCGTGTTCGCCGACCCTCCCTCATCACAACACCTCTTTACGTCCCTCAGTGACGTTATCGCTAAAAGCATCAGCCAGAAGTTCCAGCAACCCTTAGATAGGCCGCACCACCAGCCCAGTGAACTTATGTACGCGCGAGGCCCTGACCGACACGTGTCTGTCATCAAGACTCCGCCTGATAACCAGCGCTATCCCACGCCCGGCAACTCTAAGCAAATGCCCAACAACAACGGCCAGCCGGCCGTCGGTGGCAAGGGCACGCGGCCCAAACGTGGCAAGTACCGGAACTACGACCGTGACAGTCTCGTGGAGGCGGTGAAAGCCGTTCAGCGCGGAGAGATGTCCGTGCACCGCGCCGGCTCCTACTATGGCGTGCCGCACTCCACGCTGGAGTACAAGGTCAAGGAGCGCCACCTCATGCGGCCGCGGAAGCGGGAGCCCAAGCCGCCGCAGGACGCCAACAAACCGCAGCCACCAAAGCCACCACCGCCGAAACCGCCGACGAAGCCGTTCTCTAACGGACTCAACGGGCCAGAAGCCCCAGGTTATCCTCCCGGCTACCCGTTCTGGCCTGGCAGTGGGTTCCCACCGCCGCCTGCTCCCGACTTGTATGCCTCGCACATGATGCGACGACTGCGCGAAGAAGCGCCACCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCAGGTCGAGCCTGGAGCGGCCCGCGCTGCTGCAGCGGCTGGCGGCGCCGCCGGGCGGCGAGGCGCGCCGGCCGCTGCCGCCGGACGGCGACGAGCCTCCGGCGCGCCGCGCGCGGTTGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGACTGCGCGCCGACAAGCTGCGGCCGCGCAATGGCACGCCCACACCGCCGCCCGCGCCGCCGGCCGAGCCGCCGCCGCCGCCGGCCGCGCCGCCGGACCGCGCCTAG
- Protein Sequence
- MLWRPYEMCLSYDMLYAWRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLESASNSSGRRAYTDEELQSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGTTVDHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQHQAPIAPITPMHPTGQASLKGPSQLLLPPSVFADPPSSQHLFTSLSDVIAKSISQKFQQPLDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPTPGNSKQMPNNNGQPAVGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDANKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPGGEARRPLPPDGDEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00122280;
- 80% Identity
- -