Alot019562.1
Basic Information
- Insect
- Agrochola lota
- Gene Symbol
- arid5b
- Assembly
- GCA_947364205.1
- Location
- OX376247.1:917143-932005[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.3e-11 1.2e-07 32.5 0.0 3 84 227 295 225 298 0.84 2 4 0.95 2.6e+03 -0.7 0.0 48 84 333 358 331 360 0.67 3 4 0.95 2.6e+03 -0.7 0.0 48 84 396 421 394 423 0.67 4 4 0.95 2.6e+03 -0.7 0.0 48 84 459 484 457 486 0.67
Sequence Information
- Coding Sequence
- ATGGTGAAGGACGAAGTACTAGCCATCAACGACAAAGTAGTCCTCCGCGCAGACGACCTGCTCTCATGGATGTGCGTGGGCACCGAATGGCGCTGGGGGCTGAGGGCTGTGTGGCGCGGCGCCTGCGCCCCTCCGGCCGACCTGCCTCGCCACGCGCCGCTCACGCACACCAAGTTGGATTTCAGTGATGTTGATAGTGAGAAGAGTTCTATTGTGGTGGACACAGACGCTCCAGGCGTTGTAGTTTTCTCCTACCCGAGGTACTGCCGCTACAGGGCACTCATAGCTCGGCTGGAAGGCATCCAGGCATCATGGCTGCGAGACTCCTTGGTGGCAGCTCTAGGAGGGTACGCGGCCCCTACCAGTAACACCAGGATATTGTATTGCAAGGACACTTTCGAGTACCCCGAGCTGGAGGGTCACGAGTTCGTGTGCAACCACCTGGCGCCGCGCCTCAAGGGCCGGCCGCGCGGGCGCCGGCGCCGCGCGCACACGCCCGACGCCGCGCACGCCGAGCGCGCCAGCGACCGCTCCGACTCCGACGACCCGCCCGCCACGGGGCCCGCCCATAGTACTGACCCGACGACCCCCCGCCGCCTGTCCCTCCGCAACGGCGCCCCCCCTCCCAGCGACGAGGACGAGGAGGAGTACAAGAGAATAGAACAGACCCCCGAGGACAGAGCCTTTCTCCAGACACTGAAGATGTTCTACAAGAGCAGGAGCGAGCCCTTCAAGAGTGGACATACCCTGAAGCACTTGTCTCTCCGCGTGCTGTACCTGTCGGTGGCGTCGCGCGGCGGCTACGAGGCCGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCGGCCGACCAGCCCGCCCGGACCAGGAGGCACTACGAGAGGTATTGTACATATGTGGCGCCATCTATAACTCGACTACGAGGCCGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCGGCCGACCAGCCCGCCCGGACCAGGAGGCACTACGAGAGGCCGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCGGCCGACCAGCCCGCCCGGACCAGGAGGCACTACGAGAGGTATTGTACATATGTGGCGCCATCTATAACTCGACTACGAGGCCGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCGGCCGACCAGCCCGCCCGGACCAGGAGGCACTACGAGAGGCCGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCGGCCGACCAGCCCGCCCGGACCAGGAGGCACTACGAGAGGTATTGTACATATGTGGCGCCATCTATAACTCGACTACGAGGCCGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCGGCCGACCAGCCCGCCCGGACCAGGAGGCACTACGAGAGGCCGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCGGCCGACCAGCCCGCCCGGACCAGGAGGCACTACGAGAGGTATTGTACATATGTGGCGCCATCTATAACTCGACTACGAGGCCGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCGGCCGACCAGCCCGCCCGGACCAGGAGGCACTACGAGAGGTATTGTACATATGTGGCGCCATCTATAACTCGACTACGAGGCCGTGTGCCGCCACAAGCTGTGGCGCGCGCTCGCGGCCGACCAGCCCGCCCGGACCAGGAGGCACTACGAGAGGTGTATTCCTCCTCCCCTTCGAGAACCACGAGCGACGCAACGGCTCCTCCCTCAAACTGAACGGCAAGCTGGACGAGCCGCGCACCGTCGCCACCATCGACGTGACGGACTCGCCGCGCCGGGAGCACTGCGGCCTGCGCACGCCCTCGCCCTCCCCTAAACTCGACAAACTCGACACTTTCGACAAAATCGGAATCGACAGCGAAACTGGAGAAATAACAACCAAAGATGACATTATAGTCAAAAACGCCGAAGAGCTGAACAGAGAGTTTCTAGACTCCCTACCGAAAGAGGAGAAAACGGTTAAGATATCGGTGAAACCGGTTGAGAAGCTGATCGAACCGGTTAAAGTTTTTGAGGGCTTGGATGTGTCCAAGTTGGAGGGACAGAAGGAAGAGGGGAGGGATTTTAGTCAAAACTATTTGAGTGATATGCAGAAATTTAGTATGGGAGTCGATTCGCTAACGTCTCGTGCAACACCACTTAATGGTCACGCTGCGCCTGCACCCACCGACCTTGTAAGTGTTATTGTCATCACCTGA
- Protein Sequence
- MVKDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHAPLTHTKLDFSDVDSEKSSIVVDTDAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHTPDAAHAERASDRSDSDDPPATGPAHSTDPTTPRRLSLRNGAPPPSDEDEEEYKRIEQTPEDRAFLQTLKMFYKSRSEPFKSGHTLKHLSLRVLYLSVASRGGYEAVCRHKLWRALAADQPARTRRHYERYCTYVAPSITRLRGRVPPQAVARARGRPARPDQEALREAVCRHKLWRALAADQPARTRRHYERYCTYVAPSITRLRGRVPPQAVARARGRPARPDQEALREAVCRHKLWRALAADQPARTRRHYERYCTYVAPSITRLRGRVPPQAVARARGRPARPDQEALREAVCRHKLWRALAADQPARTRRHYERYCTYVAPSITRLRGRVPPQAVARARGRPARPDQEALREVLYICGAIYNSTTRPCAATSCGARSRPTSPPGPGGTTRGVFLLPFENHERRNGSSLKLNGKLDEPRTVATIDVTDSPRREHCGLRTPSPSPKLDKLDTFDKIGIDSETGEITTKDDIIVKNAEELNREFLDSLPKEEKTVKISVKPVEKLIEPVKVFEGLDVSKLEGQKEEGRDFSQNYLSDMQKFSMGVDSLTSRATPLNGHAAPAPTDLVSVIVIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -