Alot006120.1
Basic Information
- Insect
- Agrochola lota
- Gene Symbol
- Jarid2
- Assembly
- GCA_947364205.1
- Location
- OX376218.1:24590450-24620496[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-20 1e-16 61.5 0.1 13 89 1074 1147 1063 1147 0.90
Sequence Information
- Coding Sequence
- ATGTCTTCATTAGTTGCCAATCTACTGCTTTTCGGGGCACGTTCTCGCCGCGTTCAAGCGCAGCGCAAGTTCGCGCAGGGCGCTTACGTGCCGCCGAATGTTGTCGCCGTCGCTGCTGCCGACAACCGGCGGGACGCCGCACAAGATCCAAGAAACGTCACCATAAACAACATGACGGCTACGGGCTTATTGGACGTCGTGTCTCTACAGAGTCACTCCCATTTGACTTCACAACCTGTAGTGATCGTTGAGAGGCTACGCGGCAGGATCCCCGCCCGCGACATGCCGCCGCCCTCGCAGATCGAGACTGTTGAACCACGACACTGGGAATACCCTCATGAACGTGTGAATAACAATGTGGCCACAATCAAGAAACCTGCTGAGCCACCAAAGTTACAGATTGTAAAAAAAAAGAGAGAATATAAACGTGACCATCCTATGTCGCTAAGATGTCGGCGCCCGAGCAAGCTTGAATTAAACAAGCTTATGGCGGAAAGTTGTGCTCCTCTCAGAAAGATGGCCTCGAAGCGCAAGAAGAACTCTTCTGACGAAGATGAACCCCTCATATTCCAGAAAACTCGCCTAAAGCAGACAGCAAAACAACTGAGCAGTGTAAAACAGACCGCAGCAAAGGAGACTGTTCCCAAGGATAACACTCCTAAATCGAACCCTCCCAAGGAGAACACTCCTAAACCGAACCCTCCCAAGGACAACACCCCTAAACCGAACCTCCCCAAGGAGAACATTCCTAAACCGAACCCTCCCAAGGAGAATACTTCTAAACCGAACACTCCTAAGCCGAAAATTCCCAAGGAGAACACTCCTAGACCGAACCCTCCCAAGGAAAAATCTCCTAAACAGAAACCGTACAAGAAGAGAACGAATAAAAATGAGATCACCACAAACGAAATCAGTTTAAAGGATCGAAGAAATGTCAAGCAAATCATAGCTTGGAAAAAAACTACCATGAAGAGGGCTCCGCAGAAGAGGATTCATAAGAAATGCTCTCCTAAGCAGACTGCTCATGTCCCACCAGAGGTCGCCGTACCAGAGTTTCCCAATTTCTTAATCACCGTCATCAAGGAAGACCCCACGGATGAAAAGGTCGTTCACGACGATAAGGAACGCATGGTCACCCCAGATGACTCTGTTATCGTAGGCGTCCCGAATGACCCGGTAACCCCAGAAGTCCTGGATGATCTCGTTGCCCCGGGTGTCCCAGTCGCCACGGATGACCCAGTGGTCCCGCCTGTCCCGGTTATGCAAGATGTCTCGAATGTTCCGATGGTGTTGGATAATGAGGGGGAACGCTTGGGAAGTCTCCCGGTTGCTGGTGTTTTGGATGACGTGTTCCCGGAGAAGCGTACTAGTGTCTCGGAGGTTGATGAATCGGTGATTTTGCATGATGTACCGATGGTCAACGATGATGTTCCGGAGGCCCCGGATAATGTACCGGTGATTTTGCATGATGTACCGATGATCAACGATGATGTACCGATGGTCAACGAGGATGTTCCGGAGGTCCCGGATGAAGTACCGGTGATGTTGCATGATGTACCGATGGTCAACGATAATGCTCCGGAGGACACGGGTGACCCAGATGTCCCATTGATCAAGAGTGCCATGACGATGGGGGATGACGTAATGGTTCAGAAAGACATGATGTATCCACCGATTACGCAGCTACATATAGCTTCTCCAGTATACAATTCTAGCTCCAAAGAATACGACGCAATCTTCAGTGATCACCGAATATACTTAGGAAGCGATGCGGATGAGCCTTTCCTTGAAGAAATCCTGCAAAATACAGAAGCCAATCTTGAGCGTGCTCGAAATGTTCAGTTCGAGGTACCTACTACTTGCGTCGCGGCAGAGTGGCGCTCTGACCAGGACGTCATAAACGCGTCTCAGGAATTACTGGACTCACGATGCAAAGTGTGTAAGCCCTGCATCAGGATTGAAAAACTGATGAAAGTTTCGACTTTACTAAAATCTCAAATTGAATTAACGACCAAGGGACAGGAAAACAATGCCGCGGTTCTAGAGAACGATCCAACGGAAAGAGAAGGTGAAGCAGAAGACGTTGAAATAGAAATAGACAACGAAGATGCGGATTCGAAGAACGATGACCAAGGTCATATTTACTTGCTATTACCAAAACATTCTTGTGTGATGCTGAAATTAAGAACCAGCATGGTACACGGCAAAGAGGTCTTGGGGGTTCGCTTGATGCCGAGAGATCAGTCTCTGAAAAACAAACAAGAGTTCTCACTTGAAGAGAAAGAACATTTACTTGATCAACTTATCGAGACCCTGACAATCGGTCGAGACGTCGACTCGAAGGGGCGCAACGAAAACACAAAGCTTCGAAACATCAACACAGATGGTCGAAACGACAACACAGAGGGCCGAAACGACAATACAGAGGGTCGAAGCGACAATTTGAAGGGACAAAACGACATTCCGGAGAGTCGAAGCATAAGCATATCATCCGACAGCACTGCTGAGATGAGCGATGCTACTCACGATCAAGAGATGCCACTCCGCCTCACAGCAGAGAAAAGAAAATTAAGGCGATTAGCTGTTAAAAAGAAATTAGCTGAAGCGGAGCTGATGCACGACCGCATCAGAGAGGAAAAGGAAAGAGAGATTGCCCGCCTCGAGGAAGAGAAGAGACAGGAAATATCACGGATTACGGCGGAGAAGAATATCGTTGTCGCGGAGATGTCCCGCTACCACGAGCGGTTTACCCAGATGGAGAAGGAGAAAGAAAGAGATTTTGCACGCCTCAAGGTGGAGATCAGAGCAGAAGTGATATCTAAAATAGAGGCTAATCGCCGTATGTACGCTGAGGTCGACGGCATGGCGGCGAACCTTGCCCAAGAAAAAGATGCCAAGAAAATGGATGCGGAAGAACTTGCAGATCATGATGCGCCTGGCACCAGCAGCTCCTTGTTGACAACGAATGGCGGGTTGCTAGTAGACGCTCCTATATACCACCCCAGCGAAGAAGATTTTCGTGATCCACTTCGCTACTATGATAAGATCTGGCCAGAAGCAGTAAGATATGGCATCTGTAAGGTGGTGCCCCCTCCTAGTTGGAAGCCTTCCTTTCGAGTGCATGACGAAATGAGATTCGATGTTACGAACCAATACATTTCGCGCCTGTTCAACCGCTGGGGACCGGCCGCGAGAGAACTTTGTGCTATCAAGTTGTCCCTCGCACAACAAAAAGTTAATTTTACACGAGCACCATTGCTGGATGGTGTCGAGGTAAACTTACCGAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACTGTATATAACAAGAAGCGATGGGGCAAGGTCGCAGAAGATATGAAATTTAATAAAGGACCTAATACTGAAAGGAAACTCGACCAGATTTACGTAAAGTATCTGCTACCATACGACACCCTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAATCGAAAGAATCAAAAACTTTTGGACCGCGCCGTGAACCCGCTGAACCGCCAGAAGCGATTGCTTGGCTTAATGGACTCTTCTGACGATGAGACAGAAGACGAAGACACGGTGGCCGCTGTCAATGAGGCAGAAGACTGCATCATCAAGGGCGCGGTCATGAACAGAGCTAAATTCAAAAAGATTGCCACCATGACGTACGAGAACACATTCGGACAAGGCTCGGAGGCAGCCGACCCTCCCGAATTGATCAAAATCGAGGAGTATTACTGGCGCCTCGTGACACTGGGCACCGAGCACGTGTGCGTGCACACCGCGGCCATTGACACCGGCGAAGAAGGCTACGGCTTTATCAAAAATAAGTCTGACTCCTATGGACGCCACCCTTGGAATCCGAAGATGGTTAGCCAGAATCCTCGCAACGTGCTTCAGTATTTAGGTCCGGTGTTGGGCGTAACGGTGCCCACTCTGCTTCTCGGAATGCTATTCTCGACCTCCTGCTGGCACAAGGATCCACATGCAGTATCCTGGTTGGAGTACCAGCTCTTAGGACCCGAAAGGATCTGGTACGGCATCCCAGCACATCAGGCGGATAACTTCAGGAAAGCTGTAGAAACTCTTTGCCCGACATCTTGCCAGAACAAAGGTCTGTGGCTGCCGACGGACATCACGATGATCCCGCCGAACTTGCTGCGTGAGCACAACGTGACGATGTCTCGCGTCACGCAGAGGGACGGCGAGTACATCCTGGCCTTCCCGAACGCCTACACCTGCTGCATCAGCACCGGCTACACGGAATCAGAAAGCGTATATTTCGCACCGCCGTCCTGGCTTGAGAGTCTGTGGACAGTCTTCAAGGAGGCCCGAGAAAGTTGCGAGCCGACAATGTTCGCAATGGAACATCTGCTCTACAACATAGGCAAAGACCCGAGAGCTGAGCACACTATACTGAAGATCGCCCAGCCGCTATACGACAAGATGTTGCGCGAAGAGGTCACCAACAGGCAGATGCTGCAAGAGCGGGGACTGCCGTTTTTTCAAGATTTACTGGGCACCAACACATCACGTAAGAAGAACAAAGCGAACCCGTTCAATCCACGCGGTCAAGACGAGTGCGAGTACTGCAGGGCCACGTTATACCTCTCGAAGGTAAAGGGGCTCACTGGGAAAAATACAGTTCTATGCCTAGAACACGCACTAAAATTACTTGACACTGAAAAACATAAGGACAGGGACGTAGAGCAACTACAAGTTCTGGTGCATGTGAGTGTGAAAGAACTAAACACCGTGCACGACGACATGAAGCGTCGCCTAGGCATCCCGATCGCCTAA
- Protein Sequence
- MSSLVANLLLFGARSRRVQAQRKFAQGAYVPPNVVAVAAADNRRDAAQDPRNVTINNMTATGLLDVVSLQSHSHLTSQPVVIVERLRGRIPARDMPPPSQIETVEPRHWEYPHERVNNNVATIKKPAEPPKLQIVKKKREYKRDHPMSLRCRRPSKLELNKLMAESCAPLRKMASKRKKNSSDEDEPLIFQKTRLKQTAKQLSSVKQTAAKETVPKDNTPKSNPPKENTPKPNPPKDNTPKPNLPKENIPKPNPPKENTSKPNTPKPKIPKENTPRPNPPKEKSPKQKPYKKRTNKNEITTNEISLKDRRNVKQIIAWKKTTMKRAPQKRIHKKCSPKQTAHVPPEVAVPEFPNFLITVIKEDPTDEKVVHDDKERMVTPDDSVIVGVPNDPVTPEVLDDLVAPGVPVATDDPVVPPVPVMQDVSNVPMVLDNEGERLGSLPVAGVLDDVFPEKRTSVSEVDESVILHDVPMVNDDVPEAPDNVPVILHDVPMINDDVPMVNEDVPEVPDEVPVMLHDVPMVNDNAPEDTGDPDVPLIKSAMTMGDDVMVQKDMMYPPITQLHIASPVYNSSSKEYDAIFSDHRIYLGSDADEPFLEEILQNTEANLERARNVQFEVPTTCVAAEWRSDQDVINASQELLDSRCKVCKPCIRIEKLMKVSTLLKSQIELTTKGQENNAAVLENDPTEREGEAEDVEIEIDNEDADSKNDDQGHIYLLLPKHSCVMLKLRTSMVHGKEVLGVRLMPRDQSLKNKQEFSLEEKEHLLDQLIETLTIGRDVDSKGRNENTKLRNINTDGRNDNTEGRNDNTEGRSDNLKGQNDIPESRSISISSDSTAEMSDATHDQEMPLRLTAEKRKLRRLAVKKKLAEAELMHDRIREEKEREIARLEEEKRQEISRITAEKNIVVAEMSRYHERFTQMEKEKERDFARLKVEIRAEVISKIEANRRMYAEVDGMAANLAQEKDAKKMDAEELADHDAPGTSSSLLTTNGGLLVDAPIYHPSEEDFRDPLRYYDKIWPEAVRYGICKVVPPPSWKPSFRVHDEMRFDVTNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRAPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWGKVAEDMKFNKGPNTERKLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRAVNPLNRQKRLLGLMDSSDDETEDEDTVAAVNEAEDCIIKGAVMNRAKFKKIATMTYENTFGQGSEAADPPELIKIEEYYWRLVTLGTEHVCVHTAAIDTGEEGYGFIKNKSDSYGRHPWNPKMVSQNPRNVLQYLGPVLGVTVPTLLLGMLFSTSCWHKDPHAVSWLEYQLLGPERIWYGIPAHQADNFRKAVETLCPTSCQNKGLWLPTDITMIPPNLLREHNVTMSRVTQRDGEYILAFPNAYTCCISTGYTESESVYFAPPSWLESLWTVFKEARESCEPTMFAMEHLLYNIGKDPRAEHTILKIAQPLYDKMLREEVTNRQMLQERGLPFFQDLLGTNTSRKKNKANPFNPRGQDECEYCRATLYLSKVKGLTGKNTVLCLEHALKLLDTEKHKDRDVEQLQVLVHVSVKELNTVHDDMKRRLGIPIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00363811;
- 90% Identity
- -
- 80% Identity
- -