Alit014666.2
Basic Information
- Insect
- Agrochola litura
- Gene Symbol
- GATA4
- Assembly
- GCA_949152395.1
- Location
- OX424498.1:17130065-17138724[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.3e-18 3e-14 53.8 2.2 1 35 99 132 99 133 0.98 2 3 3 1.7e+04 -3.0 4.8 3 17 265 279 264 285 0.79 3 3 3 1.6e+04 -3.0 4.5 10 23 284 297 280 299 0.89
Sequence Information
- Coding Sequence
- ATGCTTTCCTTATTCCTAAGGCGTGTCTATGTCGCAGACAGTTTGTATAATTCCGCTTTCTCAACAGCGAGCAATGGTGAATGGCACAGTTCGGGCCGAGGTTCAAGCGTGGCGGGCACGGCGCGAAGAAAACAAAGCTTCCCTGCACGAGCACAGCCCCTCATGGCCGTAGACCCGCCCGCCACCAACACACAATGGCCACAAACAGCGTCTGAGAATCTGGAACCACCAGAAGCATCATCAACACCAGGCGGTGCGGGCTCCGCTCGCTCGGGGCCTCGCGTCGAACTATCTTGCAGTAACTGCGGCACGCACACCACGACAATATGGCGGCGCGACGCGCGCGGCGAAATGGTCTGCAACGCGTGCGGACTGTACTTCAAGCTGCACGGAGTTCCGCGACCTACGGCCATGCGGCGCGACACTATACACACGCGTCGTCGTAGACCGAGACATGATGGCAAGCACACTAAGAGCAAATCTCGTCGCGCTGGAAGCGGCGGTGGGGCGGGCGGCGACACGTGCGCGGCGGGCGAAGGCGCGGGCAGCGGCGGCGAGGGCGCGGAGGAGGCCGTGCTGGCCGCGCTCAGGAGACAGCTGCAGCCGCACCTGCTGGCGGCGCTGCACGCGCACAACACGCGCACTGTGCGGCCGCATCGCGAACAGGTACGTCATGTTATTGTAACTATACTACGTGCTGGCCGCGCTCAGGAGACAGCTGCAGCCGCACCTGCTGGCGGCGCTGCACGCGCACAACACGCGCACTGTGCGGCCGCATCGCGAACAGGTACGTCATGTTATTGTAACTATACTACGTGCTGGCCGCGCTCAGGAGACAGCTGCAGCCGCACCTGCTGGCGGCGCTGCACGCGCACAACACGCGCACTGTGCGGCCGCATCGCGAACAGGAGACAGCTGCAGCCGCACCTGCTGGCGGCGCTGCACGCGCACAACACGCGCACTGTGCGGCCGCATCGCGAACAGGTCGGTCTGAACACTCCCGAGTACGACGAGGCGCCACTGAACCTCGTAGCGAGTCACGTAGCCGCCGCCGAAGAATCGCACTGA
- Protein Sequence
- MLSLFLRRVYVADSLYNSAFSTASNGEWHSSGRGSSVAGTARRKQSFPARAQPLMAVDPPATNTQWPQTASENLEPPEASSTPGGAGSARSGPRVELSCSNCGTHTTTIWRRDARGEMVCNACGLYFKLHGVPRPTAMRRDTIHTRRRRPRHDGKHTKSKSRRAGSGGGAGGDTCAAGEGAGSGGEGAEEAVLAALRRQLQPHLLAALHAHNTRTVRPHREQVRHVIVTILRAGRAQETAAAAPAGGAARAQHAHCAAASRTGTSCYCNYTTCWPRSGDSCSRTCWRRCTRTTRALCGRIANRRQLQPHLLAALHAHNTRTVRPHREQVGLNTPEYDEAPLNLVASHVAAAEESH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -