Basic Information

Insect: Agrochola litura
Gene Symbol: -
Assembly: GCA_949152395.1
Location: OX424518.1:12559349-12561685[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.023 20 6.7 2.6 18 43 9 31 5 32 0.93

2 17 0.0056 4.8 8.7 0.5 17 44 36 60 32 60 0.85

3 17 0.0023 1.9 10.0 0.1 18 43 68 90 65 91 0.87

4 17 6.4e-05 0.055 14.9 1.1 17 44 98 122 95 122 0.91

5 17 0.00099 0.85 11.1 1.2 18 44 129 152 127 152 0.94

6 17 0.00012 0.11 14.0 1.2 15 43 157 182 153 183 0.89

7 17 0.0096 8.2 8.0 0.5 18 44 189 212 185 212 0.90

8 17 0.008 6.9 8.2 0.4 18 43 220 242 214 243 0.85

9 17 0.83 7.1e+02 1.8 0.0 17 44 253 277 245 277 0.82

10 17 0.72 6.2e+02 2.0 0.4 14 43 298 324 281 325 0.75

11 17 1.5 1.3e+03 0.9 0.0 15 27 358 370 354 384 0.80

12 17 0.17 1.4e+02 4.0 4.2 18 43 406 428 401 429 0.90

13 17 0.18 1.6e+02 3.9 2.4 14 29 431 446 429 458 0.73

14 17 0.0064 5.5 8.5 3.0 12 43 458 486 449 487 0.78

15 17 0.15 1.3e+02 4.1 0.8 17 44 492 516 488 516 0.85

16 17 1.1 9.8e+02 1.3 1.0 18 28 523 533 519 552 0.82

17 17 0.00014 0.12 13.8 1.9 5 43 604 641 603 642 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.023	20	6.7	2.6	18	43	9	31	5	32	0.93
2	17	0.0056	4.8	8.7	0.5	17	44	36	60	32	60	0.85
3	17	0.0023	1.9	10.0	0.1	18	43	68	90	65	91	0.87
4	17	6.4e-05	0.055	14.9	1.1	17	44	98	122	95	122	0.91
5	17	0.00099	0.85	11.1	1.2	18	44	129	152	127	152	0.94
6	17	0.00012	0.11	14.0	1.2	15	43	157	182	153	183	0.89
7	17	0.0096	8.2	8.0	0.5	18	44	189	212	185	212	0.90
8	17	0.008	6.9	8.2	0.4	18	43	220	242	214	243	0.85
9	17	0.83	7.1e+02	1.8	0.0	17	44	253	277	245	277	0.82
10	17	0.72	6.2e+02	2.0	0.4	14	43	298	324	281	325	0.75
11	17	1.5	1.3e+03	0.9	0.0	15	27	358	370	354	384	0.80
12	17	0.17	1.4e+02	4.0	4.2	18	43	406	428	401	429	0.90
13	17	0.18	1.6e+02	3.9	2.4	14	29	431	446	429	458	0.73
14	17	0.0064	5.5	8.5	3.0	12	43	458	486	449	487	0.78
15	17	0.15	1.3e+02	4.1	0.8	17	44	492	516	488	516	0.85
16	17	1.1	9.8e+02	1.3	1.0	18	28	523	533	519	552	0.82
17	17	0.00014	0.12	13.8	1.9	5	43	604	641	603	642	0.85

Sequence Information

Coding Sequence: ATGTATCAGAATCAATTAGATTTTGTTTGCGATTACTGCTCAAGGacttttacaagaaaatataacTTGCAAACTCATATAGAAAACTGTCATATCAATTCTTCATGCCACTGTAATATCTGTGGCCAGAATTTCGGTAGTCCGGCTGGATTGATACAACACCTCTCCAGAGGACATAACAACTATGGCCAGCCTTTTCCAGAATGTGAACTGTGTGGACGAATTTTTActagaaaacaaaatataacatcACACATGATAACTGTACATCTTCAGGGACTTGGATACGAAATTCGGTGTCGGTTCTGCGAAAAAACATTCACTACAGAACGCAATTTGAAAAGGCATATCAATCAGTTGCATAATCCTGATGTTGAGTATCCTACGTGTAATGATTGTCACAAGGTGTTTAAAGGAAAACACTCGCTCATAGCACATATACAGTCAGTACATAATGTGAGCGAAAAGGACGCCATCAAATGCCATTTGTGCGAAAAAGTGTACACGAATAACAGGAACTTGAAGCGACATATTGAAATGTTTCATGGCGTAAAAGGAGAGTTCAGATGCGACATCTGCCCAAAAGTATACACCTCGAACCAGAGCTTGAGACGGCACGCCAGAACACGGCACAACACCGACAGCCAGGAACACTTGACATGCAACTTCTGTATGAAAGTTATCATCGGGCGAGAGAATTTCGACAGCCATATACAATTCCACCACCAAGACGCCGAAATCGATGGTAGAAACGAGTTTGTGTGCGAGTCGTGTGACAAAAGCTTCGAAGAAGAGTTTTGTCTGCGGCAACACGTGAAAGCGGAACATTCTTTTAAAACCTTCTACAAGTATTGCAGGAGATCGTTACTCAAACAATACGGGATGGACACACAGAACATATACAATTGTGAATATTGTGACAATTCTTTTTTAACAGTCTACGAGCTTAAAGACCATATGCGCGTTAACCACGACATTGAGTACTCGCTATCAACTTGCAACGTCtgttttcataagttttttagTAAAGAAACCATGTCTGCGCATAGGAATGTGTGTCTACCGCCGCCAAACGTGAACGCTTGCAGTCACTGCGATAAACTCTTCACTGATATTTCAAGCTTAGAATTTCATACGAGAATTTTTCACCCCCAAGCTCAAATCGCCGATTCTAACATTTCATCAACGAACACTGATGAATATGGCGTTTCGTTTAAATGTGAACATTGTGACCGCATCTATTACAGCGACAGATCCCTCAAGCATCATATGAAGCTCAAACACACGACAGATGAAGAAGTAGAATGTGAATTGTGCGGAAAAATCTGTAGTAACAAGTATTATTTAGCTTCACATATAAAAATCGTCCATAACAACGACTCTTGGTCGAGATGCGAATACTGTGATAAACAGTTTAAATCTAAAAGAAATATTAGAAGACATATTGAATACACTCATTTGGGCATGCAGCGGTACAAATGCATTGAATGTGAGACCTTGTTTAAAGAAAAAAGGAGTTTACGAAAACATGTCCGGACGAAGCATCCTAACTCGGCGGCTTTTCCTCAATGCCATATATGTCACAAACGATTTGAGTCGGCGAAATCTTGTAAGATACATCTTAAACTGTTGCATTCTTTCAACATGAACACCCACCCGTGTCACCTCTGTTCAGTATCGTTCAGTTCAAATGAGGCACTAAATATACATCTCGAGACAAAACATTTAGCCGAAGATCAAATCTACAAATGTGAAGAATGCAACTTAGTTTTCAAAGGGCAAGAAAAGTTTGACGCTCACAACGAAGTCTGCCACGTCAATTTAGTCCCTACGATCAAGCAAAAAGTACTGCCTAGATGCATTCTTTGCATGAAAGATTTTAGCACAAGGAAAACTTTGAAACGTCATATAAAGAAATTCCACGAAGATTTTGATGTGGACGAGTTAGCAACTTTTGGCTCGAGGCGAAGAACGTTTACAGTTGATTGTGAAGACTgtataaaaaatttcaacgatgATTTCTATTTGAGCGTGTACAATAAGTTAAAGTATTTAAGAGACTCGGAAATATTTAAGTGTGGGAGTTGTTTCGAGTCCTACAACTCCTTGGAGTTCGCGATACAAAGGTATAAGGTGACAAACGCCGATGTTTGTAAAAGTAAAATGATTTTGAGCGAACTTTGTACCACGGAGATGAGTGAGGAAGAGCATGACTTCTCTGACTTCGGAGCTCTGCACGATATGTTGCCGGAGAGTACTACTGGTGatctaaatataaaattggAACCTTTCGATGATTCGGAGACGGAAATCAAGACGGAGCCTGTGTCGCCATAA
Protein Sequence: MYQNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCNICGQNFGSPAGLIQHLSRGHNNYGQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEIRCRFCEKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFKGKHSLIAHIQSVHNVSEKDAIKCHLCEKVYTNNRNLKRHIEMFHGVKGEFRCDICPKVYTSNQSLRRHARTRHNTDSQEHLTCNFCMKVIIGRENFDSHIQFHHQDAEIDGRNEFVCESCDKSFEEEFCLRQHVKAEHSFKTFYKYCRRSLLKQYGMDTQNIYNCEYCDNSFLTVYELKDHMRVNHDIEYSLSTCNVCFHKFFSKETMSAHRNVCLPPPNVNACSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNTDEYGVSFKCEHCDRIYYSDRSLKHHMKLKHTTDEEVECELCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTHPCHLCSVSFSSNEALNIHLETKHLAEDQIYKCEECNLVFKGQEKFDAHNEVCHVNLVPTIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEDFDVDELATFGSRRRTFTVDCEDCIKNFNDDFYLSVYNKLKYLRDSEIFKCGSCFESYNSLEFAIQRYKVTNADVCKSKMILSELCTTEMSEEEHDFSDFGALHDMLPESTTGDLNIKLEPFDDSETEIKTEPVSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00447464;
90% Identity: iTF_00072251;
80% Identity: iTF_00037074;