Alit026589.1
Basic Information
- Insect
- Agrochola litura
- Gene Symbol
- -
- Assembly
- GCA_949152395.1
- Location
- OX424506.1:23721948-23725769[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.74 6.4e+02 1.9 0.0 29 42 33 48 30 48 0.81 2 17 0.45 3.9e+02 2.6 0.0 29 42 81 94 76 94 0.81 3 17 0.45 3.9e+02 2.6 0.0 29 42 127 140 122 140 0.81 4 17 0.43 3.7e+02 2.7 0.0 29 42 173 186 168 187 0.82 5 17 0.45 3.9e+02 2.6 0.0 29 42 219 232 214 232 0.81 6 17 0.45 3.9e+02 2.6 0.0 29 42 265 278 260 278 0.81 7 17 0.45 3.9e+02 2.6 0.0 29 42 311 324 306 324 0.81 8 17 0.45 3.9e+02 2.6 0.0 29 42 357 370 352 370 0.81 9 17 0.45 3.9e+02 2.6 0.0 29 42 403 416 398 416 0.81 10 17 0.45 3.9e+02 2.6 0.0 29 42 449 462 444 462 0.81 11 17 0.45 3.9e+02 2.6 0.0 29 42 495 508 490 508 0.81 12 17 0.45 3.9e+02 2.6 0.0 29 42 541 554 536 554 0.81 13 17 0.45 3.9e+02 2.6 0.0 29 42 587 600 582 600 0.81 14 17 0.45 3.9e+02 2.6 0.0 29 42 633 646 628 646 0.81 15 17 0.45 3.9e+02 2.6 0.0 29 42 679 692 674 692 0.81 16 17 0.45 3.9e+02 2.6 0.0 29 42 725 738 720 738 0.81 17 17 0.43 3.7e+02 2.7 0.0 29 42 771 784 766 785 0.82
Sequence Information
- Coding Sequence
- ATGAACAGAACAAGAATTGAGCGGAGCGCGCGCGTCGTCCGTGAAGCGCACCGTGCGCACGACCGGGGGCCCGGGGGCCGGGGGCCCGGGGCGCGGGGCCGGTGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCGTCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCATCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTCAGTCGATGGCCTGTTGCGTCATCTGCAGACACAGCGCGTCGAGGCTGGAGTAGTCGAGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAGGAGTGCGACTTGCCGCGCGGGGCCGGCGCGGGTGCGGCGTGGTGGTGGCGGGCGGGCGCGGCGCGTGCGGCGGGTAG
- Protein Sequence
- MNRTRIERSARVVREAHRAHDRGPGGRGPGARGRCGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRVEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRIEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGSVDGLLRHLQTQRVEAGVVEVRRGGGGRARRVRRVGVRLAARGRRGCGVVVAGGRGACGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -