Basic Information

Insect: Agrochola litura
Gene Symbol: clz9
Assembly: GCA_949152395.1
Location: OX424508.1:3420372-3422198[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.2e-08 2.5e-05 25.3 0.0 11 37 21 48 15 51 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.2e-08	2.5e-05	25.3	0.0	11	37	21	48	15	51	0.86

Sequence Information

Coding Sequence: ATGTCTTCaagattaaatagaaaaaaatgggATGGTAAATCCATGAAAATTGCTTACCTTGCTgtgaaaaacaaagaaatgggGTATCTTAAGGCTTCGAAATTATATGGTGTTCCCAAAAGCACTTTAGAAGACTATGTTAAGAGTTCCAAGGATATAGATGAGCTCCTGGCAACTAAATTAGGCAGAAAACCTACATTTGACAAAGAAATAGAAGAAGAATTGGTTGAATACTGCCTTGAGatggtaaaaaaatactatgggCTTCGGGCAAATGATATAAAACACATTGCATTTGAGCTTGCTGTAAAAAATAACATTCCGCATCAGTTCTCCCACAAGGGTCAGGCTGGAAAAAAGTGGCTTGCTGGTTTTTTGAAGAGGCACCCACAACTTGCTTTTAGAACACCTGAAGCTACCACAGCTTTAAGAGCAAGGGGTTTTACTATGGAGAAGGTGACACACTTTTTCGATGAAATTTTGGGTCCTGAGATggaaaaaattaattatgatcCAATGCGTATTTTTAATGTAGATGAGACGGGTGTCACTGTTGTGCAAAAGAAAATGGCAAAAGTAATTTGTTTGAAAGGACAAAAGCAAGTCGGTGGAATCACTTCTGCAGAGAGAGGGGCTCTTGTGACTTTAGTATTTTGTATGGGAGCTTCCGGCATATTTGTACCTCCATTGTTTATTTTCCCTCGAGTGAATATGAAGAGAGATTTGGAAGATGGAGCACCACCTGGTTCAAAGTTTGATGTGCATAAATCGGGGTGGATTCAGCTACACATCTTTACAAAATGGTTTCAACATTTTATTGATTGTGTTAAACCCTGCAAGGAAAAACCGGTTATTCTTTTGTTAGATGGACATTATTCGCATACAAGAAACATAGATGTGATAAGCCTGGCTAGAGAACATGGTGTTATCCTCATTTCAATTCCCCCACATACCTCACATAGGTTACAGCCGCTAGATGTGGGATTCATGGGACCGTTTAAGAAGTTCTACCATCAAGAAATAGAATCATGGTTAAGATCTCATCCAGGACGGGTAGTAACAGCATACCAAGTATCAGAGTTAGTCGGCAAAGCATTTTTACGTGCTCAATCAGCTGAGATAGCTGTTAATTCATTCAGAAAGTGTGGAATTATTCCTTTCAATAAAAATGTCTTCAGAGACGAGGATTTCGCCGTCGAGGACTCTCCGGGTGACATAAGCAACGCTTCTGAAGCTACGATGAATGATTCTGCAGTTTGTAGCCGACCATCGACTCCACAACCGAGCACGTCTGGATTGCAGAAATCCACCGGGTCAATTACGcctttacttttcaaagaacctGCGAAAACGATGTCAAAGTTGATGgtgtcaccacagataattagtcCTATTCCTGCTATTCAAAGAAAACCTAGGATAAACAGCAGAGAGACAAAGCCTACAGTTTTATCAAGCTCGCCATATAAAACAACACTTGAAGCACAAATAGAAAAAAGAGATGGAcctcttacaaaaaaaagaacggCAGCAGTTAAAAAGACCAAGGGGAAaaagaaaatggaaaaaaataaagttttaaaagtaAACAAGAAAGATGTTTCTGATTCAGAAGATTcagaaataaatatgattttagAAAGTGATGGCAGCGAAGCTAACGATGATGATGCCGAATGCACTTATTGCAATATGGCCTTTTCTACTGACAGTCGAGGGGAACGATGGATAAGATGCCTTGCCTGTCGTCGCTGGTGTCACGAAGAATGCGCTGGAGTAGAAGATCATAGTGTTGTAGACTTTGTCTGTGATTTATGTCTAGCTTAG
Protein Sequence: MSSRLNRKKWDGKSMKIAYLAVKNKEMGYLKASKLYGVPKSTLEDYVKSSKDIDELLATKLGRKPTFDKEIEEELVEYCLEMVKKYYGLRANDIKHIAFELAVKNNIPHQFSHKGQAGKKWLAGFLKRHPQLAFRTPEATTALRARGFTMEKVTHFFDEILGPEMEKINYDPMRIFNVDETGVTVVQKKMAKVICLKGQKQVGGITSAERGALVTLVFCMGASGIFVPPLFIFPRVNMKRDLEDGAPPGSKFDVHKSGWIQLHIFTKWFQHFIDCVKPCKEKPVILLLDGHYSHTRNIDVISLAREHGVILISIPPHTSHRLQPLDVGFMGPFKKFYHQEIESWLRSHPGRVVTAYQVSELVGKAFLRAQSAEIAVNSFRKCGIIPFNKNVFRDEDFAVEDSPGDISNASEATMNDSAVCSRPSTPQPSTSGLQKSTGSITPLLFKEPAKTMSKLMVSPQIISPIPAIQRKPRINSRETKPTVLSSSPYKTTLEAQIEKRDGPLTKKRTAAVKKTKGKKKMEKNKVLKVNKKDVSDSEDSEINMILESDGSEANDDDAECTYCNMAFSTDSRGERWIRCLACRRWCHEECAGVEDHSVVDFVCDLCLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01084193;
90% Identity: iTF_01084193;
80% Identity: iTF_00036613;