Basic Information

Insect: Agriphila straminella
Gene Symbol: stc
Assembly: GCA_950108535.1
Location: OX467314.1:15145992-15158732[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.5 2.7e+04 -3.7 1.6 15 19 61 65 60 65 0.81

2 15 0.033 6.1e+02 1.6 1.5 2 10 93 101 93 101 0.92

3 15 2.3e-05 0.42 11.7 18.1 4 19 109 124 107 124 0.93

4 15 1.7e-07 0.003 18.5 11.0 1 18 160 177 160 178 0.98

5 15 0.00089 16 6.6 17.9 1 19 219 237 219 237 0.98

6 15 6.1e-06 0.11 13.5 12.2 1 19 278 300 278 300 0.88

7 15 2 3.6e+04 -4.7 2.2 6 10 330 334 330 334 0.94

8 15 0.0095 1.7e+02 3.3 7.3 1 11 340 350 340 351 0.93

9 15 0.037 6.7e+02 1.4 0.6 4 10 355 361 354 361 0.92

10 15 2.3e-06 0.041 14.9 14.9 3 19 369 385 367 385 0.92

11 15 2 3.6e+04 -4.9 0.9 6 10 414 418 414 418 0.79

12 15 0.00085 15 6.7 10.0 10 18 432 440 429 441 0.92

13 15 0.88 1.6e+04 -3.0 1.3 8 13 446 451 445 452 0.79

14 15 3.6e-08 0.00065 20.7 14.4 1 17 477 495 477 501 0.85

15 15 0.00029 5.3 8.1 12.2 1 19 507 530 507 530 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.5	2.7e+04	-3.7	1.6	15	19	61	65	60	65	0.81
2	15	0.033	6.1e+02	1.6	1.5	2	10	93	101	93	101	0.92
3	15	2.3e-05	0.42	11.7	18.1	4	19	109	124	107	124	0.93
4	15	1.7e-07	0.003	18.5	11.0	1	18	160	177	160	178	0.98
5	15	0.00089	16	6.6	17.9	1	19	219	237	219	237	0.98
6	15	6.1e-06	0.11	13.5	12.2	1	19	278	300	278	300	0.88
7	15	2	3.6e+04	-4.7	2.2	6	10	330	334	330	334	0.94
8	15	0.0095	1.7e+02	3.3	7.3	1	11	340	350	340	351	0.93
9	15	0.037	6.7e+02	1.4	0.6	4	10	355	361	354	361	0.92
10	15	2.3e-06	0.041	14.9	14.9	3	19	369	385	367	385	0.92
11	15	2	3.6e+04	-4.9	0.9	6	10	414	418	414	418	0.79
12	15	0.00085	15	6.7	10.0	10	18	432	440	429	441	0.92
13	15	0.88	1.6e+04	-3.0	1.3	8	13	446	451	445	452	0.79
14	15	3.6e-08	0.00065	20.7	14.4	1	17	477	495	477	501	0.85
15	15	0.00029	5.3	8.1	12.2	1	19	507	530	507	530	0.87

Sequence Information

Coding Sequence: ATGACTCAACGTGAAAGACTGAGTGAACAATTAGATAAGGGAACCTTAGAGTGCCTGGTATGCTGCGAGCGAGTGAAGCAGATTGACCCCGTGTGGTCCTGCAGCAACTGCTACCATGTGCTGCACTTGCGCTGCATCAGAAAATGGGCTATGAGCAGTGTTGTGGAGGGCAAATGGCGTTGCCCCGCCTGCCAGAACACCAGCGAAGAGATCCCGTCAGATTACCGCTGCATGTGCGGTTACGTGCGCTCGCCGGAGTACCAGCGCGGAGGCAGCGGCGCGCACACGTGCGGCCGCTCGTGCCGCCGCCCGCGCTCGTGCCCGCATCCCTGCACGCTGCTGTGCCACCCCGGACCCTGCCCGCCTTGCCAGGCTACTATCACCAAACAATGCGGGTGCGGCGCGGAGAGCCGCTCAGTCCTGTGCAGCAGCAAGCTGCCGCAAGTGTGCGGTCGCGTGTGCAACCGGCTGCTCGACTGCGGCGTGCACGCCTGCCAGAAGGAATGCCACGAGGGTGCCTGTGAAGACTGCGCCGAGACTGTCACACAAGTATGCTACTGCCCAGCGGCGCAGAGTAGATCAGTGCCGTGCACGCGTGAGACCGGCGGCGAGCAGCACTGGTCGTGCGGCGAGGCGTGCGGGTGCGTGCTGGCGTGCGGCCACCACGTGTGCCGCGCCGGCTGCCACGCGCCGCCCTGCCCGCCCTGCCGCCTGCTGCCGCGCCTGGTGCGCGCCTGCCCCTGCGGCAAGACGCAGTTGGCGGAAGGTTCCCGCAAGTCGTGCACGGACCCGATACCGCTGTGTGGCAGTATTTGCGCGAAGGCGCTGCCGTGCGGGCCCGCCGGCGATAGGCACTTCTGCAAGCAAGACTGCCATGAAGGCCAGTGCCCGGCATGCCCCGACAAGACGCTGCTGCAGTGCCGCTGCGGCCACTCGAGCCGCGAGGTGCCGTGCGCCGACCTGCCACAGATGTACAACAACGTGTTCTGCCAGAAGAAGTGCAACAAGAAACTGTCGTGCGGCCGGCACCGTTGCCGCACCGCGTGCTGCGCGGCAGCGTCGCACCGCTGCGCGGTCGTGTGCGCGCGCACGCTCTCCTGCCAGACGCACCGCTGCGAGGAGTTCTGCCACTCCGGCCACTGCGCGCCCTGCCCGCGACTAGCTTTCGAAGAGATCCGTTGCGCGTGCGGCGAACAAGCGCTGCTCCCGCCAGTGCCTTGCGGGGCGCGCCCCCCCGCGTGCTCCGCCCCCtgccgccgcccccgcccctGCGCCCACCCGCCCCACCACTCCTGCCACCAGGGCGACTGCCCCCCCTGTGTCGTGCTCACCACCAAGCGCTGCCACGGCGGACACGAGGAACGCAAGACGATACCGTGTTCCCAGGATGAGTTCTCGTGCGGGCTTCCGTGCGGTAAGCCGCTGCCCTGCGGCAAGCACACTTGCATCAAGACCTGCCATAAAGGGCCCTGCGATACTGGAAAGTGCACCCAGCCGTGCATGGAGAAGCGTCCATCGTGCGGGCACCCGTGCTCGGCGGTGTGCCACTCCAGCGCGGGCGGGCCCTGCCCCGCCGCCACGCCGTGCCGCCGCCTCGTGCGCGCCACCTGCCTCTGCGGCCGCCGCGCCTCGGAGCGCCCCTGCTGCGACAACGCGCGCGACCTCGCCAAAATAATGAGCGCGCTGGTAGCAACTAAAATGCAAGAAAGTGGATCCGTCGACTTGTCGGAAGTGCAGCGTCCGTCCAACATGCTCAAAACTTTGGAGTGCGACGACGAGTGCCGCGTAGAGCAGCGCACCCGCCAGATGGCGCTGGCGCTTCAGATCCGGAACCCGGATGTCTCGTCCAAGTTAGCGCCGCGATACAGCGACTCTCTGCGCGCGACCGCTGCCCGCGAGCCAGCCTTCGCGCAGCAAGTGCACGACAAGTTGACCGAGCTCGTGCATCTCGCTAAGAAGTCCAAGCAGAAGACCCGTGCGCACTCGTTCCCGTCGATGAACTGGCAGAAGAGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTCGCCTACGACGCCGAGCCCAACCGGAACGTCGTCGCCACCGCCGACAAGGAGAAGTCGTGGCTGCCGGCGATGAGCATCCTGGAGGTGGTAGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCTGCGagcgccgcccgcgccctccGCCGCGCTACCcaacgcgcccgcgcccgccaaATCTGGTTGGGCGACGCTTACATCAAACAACGCTTGGGCCGCGCGCCAGCCGGCGGCTGCAGCCTCCGCGGCCGCGTCCGCttccgctcccgctcccgcgccAGCGCCCGCGGAAAAGATTGACTACTTCGACAACCCGCCAGACAACTAG
Protein Sequence: MTQRERLSEQLDKGTLECLVCCERVKQIDPVWSCSNCYHVLHLRCIRKWAMSSVVEGKWRCPACQNTSEEIPSDYRCMCGYVRSPEYQRGGSGAHTCGRSCRRPRSCPHPCTLLCHPGPCPPCQATITKQCGCGAESRSVLCSSKLPQVCGRVCNRLLDCGVHACQKECHEGACEDCAETVTQVCYCPAAQSRSVPCTRETGGEQHWSCGEACGCVLACGHHVCRAGCHAPPCPPCRLLPRLVRACPCGKTQLAEGSRKSCTDPIPLCGSICAKALPCGPAGDRHFCKQDCHEGQCPACPDKTLLQCRCGHSSREVPCADLPQMYNNVFCQKKCNKKLSCGRHRCRTACCAAASHRCAVVCARTLSCQTHRCEEFCHSGHCAPCPRLAFEEIRCACGEQALLPPVPCGARPPACSAPCRRPRPCAHPPHHSCHQGDCPPCVVLTTKRCHGGHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCSAVCHSSAGGPCPAATPCRRLVRATCLCGRRASERPCCDNARDLAKIMSALVATKMQESGSVDLSEVQRPSNMLKTLECDDECRVEQRTRQMALALQIRNPDVSSKLAPRYSDSLRATAAREPAFAQQVHDKLTELVHLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSILEVVAREAGKRRVPGPVLRAPPAPSAALPNAPAPAKSGWATLTSNNAWAARQPAAAASAAASASAPAPAPAPAEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -