Astr009774.1
Basic Information
- Insect
- Agriphila straminella
- Gene Symbol
- GATA-B
- Assembly
- GCA_950108535.1
- Location
- OX467307.1:21317589-21343350[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-16 1.7e-12 47.7 7.5 1 34 297 329 297 331 0.97 2 2 1.9e-17 7.6e-14 52.0 6.4 1 35 366 399 366 400 0.97
Sequence Information
- Coding Sequence
- ATGTTGCACGACGCGTGGCCAGGCGCCTGGCGGAAGCCGGAGAACTTCGAAATTGACGAGTTTATTTCTGAGGTCCACAGTATTTGTTGTAAGACAGAGGGCGAGGCGGAGTGCGGTGCGGAGGGCGGCGAGGCGGAGAGCCCGCCCCCCCTGCCAACGCTCGGCTACGCCCACCCGGCGGCTCTATCCCCGTCCCACTCGCGCAGCTACCAGGAGCtgcggccggcggcggcgcacGCGGCACACGCGCGCGACATGCACGCCTACGCGCACATCGAGGAGGTGCTGTTCAagccggcgggcggcggcggctccACGGACGGCGCGTACCTGCGCGGGCGCAGCCCCGACCTCACGCCGTCGCCGGAGCGCCGCGACGACTACCGCCAAGTGCACTACGACCCCTACCCCCCGCCCCCGCCACCTCCACCCTACACACATGAACATCATCATCACATCGATGGTGGCaatggcggcggcgcggcgtacTCGCGTTGCGCGTACTCCAGCCCTTCACCGTACTTCCCCTCGCCAGCGGACATCGGTTCCGTGCAGCAGCAGATATGGAGCTCACCTGCTGGTGGTTCGCCGACGTACGGCTcgagcggcagcggcggcggcgtggtGCTGAGCGAGGATTACGCGCCGGAGGGCGGCGGCGCggaggcgggcggcggcggcggctcgcTGCCCGCCTTCAGCTCGCGCTTCGGCAGCGCCTTCGCCACCTCGCGCCCCTCCACCGTCTACGGCGCACCCGCCATCGCCACCAATGCATACGCACACCAGGAGGTGTGGAGCCTGGACAGCAGTCGACGGCCACAAGTTTCTGCGGCCGCACACCTATCAGCCATCGATATGGTGGAGTTTATCACGGAGGGGCGCGAGTGCGTGAACTGCGGCACCGTGCAGACGCCGCTGTGGCGGCGCGACTGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGGCACGCGGCGCACGCGCTCGCCGCGCCCGCACACGACGCGGGCACGAAGCGGCCCGGCACGACGTGCACGAACTGCCGCACGATGACGACGTCGCTGTGGCGGCGCAACGCGCACGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAGCGTCAACCGGCCCCTTGCCATGAAGAAGGACGCCATACAGACGAGAAAGCGGAAACCAAAGAACGGCATGAAGTCAGATCGGAACCTGAAGACTGCGGTCCAGCGCACGCTCGCCTCCGGTGTCAAGATGGAAAATTTACTGGAGAGCGGCAACGTGGGCGTCGGCATGAACGTGGGCGTGGGCGTGGGGCGCGGCGGGCTGGGCTACTACGCGGGCCACATGAAGCTGGAGGAGCCGCCGCCGGCGCACGCGCAGCTCTACGACGACGAGTACCGGCGCGCCGCCGACGAGCGCCTCGAGCGCCCCACCGTCGTGTCCATGGGCAGCtga
- Protein Sequence
- MLHDAWPGAWRKPENFEIDEFISEVHSICCKTEGEAECGAEGGEAESPPPLPTLGYAHPAALSPSHSRSYQELRPAAAHAAHARDMHAYAHIEEVLFKPAGGGGSTDGAYLRGRSPDLTPSPERRDDYRQVHYDPYPPPPPPPPYTHEHHHHIDGGNGGGAAYSRCAYSSPSPYFPSPADIGSVQQQIWSSPAGGSPTYGSSGSGGGVVLSEDYAPEGGGAEAGGGGGSLPAFSSRFGSAFATSRPSTVYGAPAIATNAYAHQEVWSLDSSRRPQVSAAAHLSAIDMVEFITEGRECVNCGTVQTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHALAAPAHDAGTKRPGTTCTNCRTMTTSLWRRNAHGETVCNACGLYYKLHSVNRPLAMKKDAIQTRKRKPKNGMKSDRNLKTAVQRTLASGVKMENLLESGNVGVGMNVGVGVGRGGLGYYAGHMKLEEPPPAHAQLYDDEYRRAADERLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -