Basic Information

Insect: Agriphila straminella
Gene Symbol: -
Assembly: GCA_950108535.1
Location: OX467304.1:18836383-18869267[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.26 24 6.6 0.1 2 23 494 515 493 515 0.91

2 16 0.0039 0.35 12.4 0.0 1 23 525 548 525 548 0.95

3 16 0.07 6.4 8.4 3.3 1 21 674 694 674 695 0.94

4 16 0.0073 0.67 11.5 1.2 2 23 759 780 758 780 0.95

5 16 0.0043 0.39 12.2 1.4 2 23 823 846 822 846 0.94

6 16 0.091 8.3 8.1 0.2 1 23 852 874 852 874 0.93

7 16 0.00066 0.06 14.8 3.6 1 23 880 902 880 902 0.98

8 16 0.39 35 6.1 0.1 2 19 913 930 912 933 0.90

9 16 0.52 48 5.7 0.1 1 23 1011 1033 1011 1033 0.97

10 16 2.7 2.5e+02 3.4 7.2 1 23 1040 1062 1040 1062 0.95

11 16 0.0019 0.18 13.3 1.4 1 23 1100 1123 1100 1123 0.95

12 16 0.033 3 9.4 0.9 1 23 1130 1154 1130 1154 0.97

13 16 0.014 1.3 10.6 0.2 2 23 1174 1196 1173 1196 0.96

14 16 0.013 1.2 10.7 2.1 1 23 1244 1266 1244 1266 0.96

15 16 0.00018 0.016 16.6 0.2 1 23 1272 1294 1272 1294 0.97

16 16 0.00036 0.033 15.6 1.0 3 23 1302 1323 1300 1323 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.26	24	6.6	0.1	2	23	494	515	493	515	0.91
2	16	0.0039	0.35	12.4	0.0	1	23	525	548	525	548	0.95
3	16	0.07	6.4	8.4	3.3	1	21	674	694	674	695	0.94
4	16	0.0073	0.67	11.5	1.2	2	23	759	780	758	780	0.95
5	16	0.0043	0.39	12.2	1.4	2	23	823	846	822	846	0.94
6	16	0.091	8.3	8.1	0.2	1	23	852	874	852	874	0.93
7	16	0.00066	0.06	14.8	3.6	1	23	880	902	880	902	0.98
8	16	0.39	35	6.1	0.1	2	19	913	930	912	933	0.90
9	16	0.52	48	5.7	0.1	1	23	1011	1033	1011	1033	0.97
10	16	2.7	2.5e+02	3.4	7.2	1	23	1040	1062	1040	1062	0.95
11	16	0.0019	0.18	13.3	1.4	1	23	1100	1123	1100	1123	0.95
12	16	0.033	3	9.4	0.9	1	23	1130	1154	1130	1154	0.97
13	16	0.014	1.3	10.6	0.2	2	23	1174	1196	1173	1196	0.96
14	16	0.013	1.2	10.7	2.1	1	23	1244	1266	1244	1266	0.96
15	16	0.00018	0.016	16.6	0.2	1	23	1272	1294	1272	1294	0.97
16	16	0.00036	0.033	15.6	1.0	3	23	1302	1323	1300	1323	0.95

Sequence Information

Coding Sequence: ATGGCGGAACAACCACCTCTGATTCTCTGCATGGAGAATGCAAACGGTGATGAAGTGGCCCTCAGGATCGAGCCCGGGGATGACTTCCAAACATTTCTCAGCAGAGCCAAATCGATTCTCGGTTTTGACGTCGACCTAAATTCTATAACTCGAAACCAACCCGTATCGTTAAACGATAACATTTACCGATTTCTTGTGACAGCCGAACAAAATGCACAAGACATTAATATGCAAAACTTCGACCAAATTCTAGAGCCTGGTCAGGATGCCAACGATTTAGTTTATATCTTAGATGATGGTACTCAAATCAGAGCTTCTCAGATTCATTTTGATAATGAAGACCCACAAGTAGATTTAACAGCAGAGAAAATACCTTTTGTCAAGTATGCTGAGGATTATGTTGAAGAATTTGATGTAGAAAACGTATTAGAAGAAGACACCAGAAAATTTAACATTGTAGAAAGTCCTGTCTCTCGCTGGTCTAGCAAAAATGCTAGTCCTAAGTGTAGCTTTGTCAACAGTCTCCCTTTTAAATTGGTCTGCAATAATACGTCTGTTTTCGAAGCCCAATTTACTAAATACTTGGAGTCGAGTACAGCTAAAACTTACACCACATTGAACCctgttactaataaaaataaatcaccaAGAAGTCTGATTAGggaaaactataaaacttacgaAGAAAAAATTAATAGAGGTGATGACACTGGGTATACAAGAGATGAGATTTTGAATATGTTCAAAGATTCTCCTGTATTATCCATCCCTTACGAGAGTGAAAAACGAAAGCATGTACGGAAAAGTGATCCTACGAGAGCGGTACACAAGAATTGGAATTCTAAACCTGCTAATTACTATGAGGGGATGTTGATAGGTGATAATGAAAACCAGAATTGTTTTATCTGCGGAAAATTTGTTGAAAACAATATCGATAAACTATACCTCTTTGATAATGAAGACCAAAAGCTTCATAGGTCGTCACCACAAAAGAAGTCTCCGAgacaattgaaaataatttgcgAGAGATGTTTAGGTGAAAATTTTAAACCTTGCAGAATGAAAGGCCCGAATCAGTGCTTAAATCCAGATGAATACTTAGTTATAAGAAACAACCAACAGTATATTTTCCAAAAGACCAATAAAATAGATTTCATAAGTAAATTCATGAATGATACTGGTCGTAAGAGCAAAGACACGGTTTCGAAGCAGAGACAGGAGAAAGAAAAAGTGGAATTCGTTAAAGTTGAGATAGGTTCTGATGGAGAAATAGTAACTAAACCCTTAGATAATGAACCCAGGTCATCTGATGATGTAATCATAGTTAAAGATGATGGTAGAGATAGTTCTAGTGACGTGGAAATAGTTTTGACTCCGGAAATAGATGAGAACATTGTCGATCATTTGGACGATGCAGATGAAGAGGTGAAGGAGTTTTTAGGGAAATATCAATGTGATACTTTGACCACTACTGAACTAAAGTGCAGGTTCTGCGAACGCGTGTTTTCCGATATAGCATCAGTGATGGACCATGTGGATGAACACAAACACGACTGGGATGAAGGCGTGGTATACCCTTGTCCCATATGTGAATACGGATACGCCAATGCTGGTTGGCTAAAAGGACATTTGAAAGCAGCTCATGACAATGATAAAGCCATCGTCAAAAAAGAAGTTATTGAAGACAATAAGAATGAAAATGTATCAAAGTCTCCTACAGATTCTCCTGTAGCTAAAAGAACCAGAAGTTCTGACAAGAAAACTGATGATAACTCCTTTGAAAccgAAAGTGGAGCGAAACCAGCAGATGAGAAACGGTCTGAAATTCCAGAGACATCGACAGCTTCAGGTTTCGTGATAAAGACAGAAGTGAAGCAAGAGGCATTAGACATCAGTGACGATGAAATATGGATAGTCCAGACGGGGGACGAGACTAACGAACAACTTAAGAGCTTACTGAATGCTGCTAAGGGATGTCAAAAGGAAACTGCACCTACGGGAATTTCGAAGAAAATAAAGCACAAATGTTTCACCTGCAGCCGAATTTTTGCCAACGAAGAATCACTTAACACACATACCTGTCGTCGCCGTGGGAGAAGGAGAAAGTTGTCGAGTAAAGAGGACAACGTGATTTGTGTACCCACCCAGAAGGATTTTATCAAGcGAGCTCAAGGCCGATCTAAGCCTGCAGCTCAGTCGGACAACAATCTACTTGTACCAagaaCCGCTCGTAAAAAAACCAAAGGGCCGACCACCTCCGACCCCCACATAGTGACATGCGACGATTGCAATGAGTCCTTCACTTCCAAAGTCAGACTCAAGTTTCAcatGCAGTTCCACTCCACCAACAATATGCTGACCTCCGATGGTCGGTACAAGTGTCCGGAGTGCAGTGACTCCACCTTCGATGCAGAGGTCGCCTTGTTCGACCACGTGCACTTTAGGCACCACAAGCGACGTCGTTGGCAATGCCCGGTTAGGGCTTGCGGGAAGACCTTCCATCTCAGAGCAACGCTGACGAAGCACAGCCGCACCCACACAGACACGCGCCGGTATGTGTGTGTGACTTGCGGGAAGAGATTCCTTGACAAACAGACGTTGGATGAGCACGGGGTGACACACTTGCAGATAAAACCGTTTCAATGTCACATCTGCTCTAAGCAATTGACGCGCCGCTCTCGCCTCAGGATGCACTTACGAGCTCATGAGGAAGAACTTACTCCTAAACTGATTCTGGTGTGTGTTGTATGCAGCAGAGCCTTCAGAGACCACGACGACGCACAGACTCACGCCACAAAATCGACGGAATGCATTGAAGAATTCACCAAGGATTTGAAGAAAGAGACAGAGGAGGTTACAGCCCAGCTGTCGCCCACTAGTGGGCTCGTCAAAGGGCCAGCGCGCGCTGAATCTCCCAAGCTAAACAAGCCGATTCCTCGTCAAGTGTCAAGCCCTCTCGCTCGGCCACTACTAGAGATCTTGCCAGATGAAGCGCGCTCGCTCGTGCGCGTCGTGGAGATTGAGAAGGCGTTTCGCTGCGAATTTTGTGAAGACGTGTTTTACTTAGAAGACGGCTTGAACTCTCACCGTGCGATCCATAAGAACGTGAAGAATCCATTCACCTGCCACATCTGTAAAGTCAGCTTTGCTACTTACTCCAGATGCACAACCCATAAAACCACACACGGTTTCTACAAGCGCCCCCTAGCGGACGCCAAGCGACAGGCATGGGGCCCCAACGCTGGGCCCTCTGCCGCTGGCATACTGGGCTATGGCGGGTTTCCGGTCGCCAAGCACTTCCTGTGCGAGGATTGTGGACGCTCGTACCTCCATTGGACGTATTTGCAAGTACATCGTCGCATAAAGCATGCTAACGACAACTTCCTCTACAAGTGCACCCAATGTAATGACATGACTTTCCCAAACAGTTGGAGTTTAGCTTACCATAGAAAGAAGATCCATGGACAATTGGGTAATGCCATAGCTACTTCAAAGATACCTAGAGAAGACTATAGGATTCCTTGTCGAGATTGTGACGAAATACTGCCGAACAAAACTGCACTTTATAAACACAGGAAGAAGGAGCATAGTGACATGTCTCTTACACTAAACGATAATCCAGGTACTTCTTGTTCCTGCGGCAAGCAACATGCTGCACAATGCGGCGACAATGTGGGACATCACTCTGAAATCAATAAACATGTTGACGGTGGCGCGTGGCGTCGCTCGCACGCGTGCTCCGTGTGCGGACACACGTTCCGCAGCGCGAGCGTGCGTGACGAACATTTGCGCACGCACACCGGCGAGCGACCGTTCCCCTGCGATCTGTGCGGACTGGCCTTTAGGCGGTCCACCGCCATGCGCAACCACCGTCTGATCCATACAGGGGTCCGTGCGTGGGCTTGCTCGCGCTGCCCCAAGAGGTTCCGTATACGATCCGAGCTACGGACGCACTTGAGATTGAAGCACCCCGCACATTTGGCTGTAATTGAGATACGCGGTCTGAACCCAACTCCTGACGAAGTATTGGAGCACTTGCGAGCGAACAACATAGCTCACGACAAGGTCATAGAAATCACCAAGATGTCCTTCGCCAAGGGGACGTCGAGTATAATTCCTAACTGCGCCCGCGCACTGGCGATGCTAGGCAACGTGCCGCGAACGCCCGTGGCTTACAGCAAACCACTCATAGGCGCCAGCGATTTCCAACCAGCCCGCCGCGGGCGCGGTATCGCTAAGAATCCACGTCGGCCCAAAATTCTGCAGCGAAGCGAAGAAACAGCGGACCAAAACAACTACCCTGTGATCGACGCTCCAGGGAATCTAACGGACGCCGAAGTACAAATGCTGCTGAGGGACGGCGTATTAGTAGATGGTAGTCAGATGGTGCAGCTACAAATGAGTGACAATCTCTTGGAGTAG
Protein Sequence: MAEQPPLILCMENANGDEVALRIEPGDDFQTFLSRAKSILGFDVDLNSITRNQPVSLNDNIYRFLVTAEQNAQDINMQNFDQILEPGQDANDLVYILDDGTQIRASQIHFDNEDPQVDLTAEKIPFVKYAEDYVEEFDVENVLEEDTRKFNIVESPVSRWSSKNASPKCSFVNSLPFKLVCNNTSVFEAQFTKYLESSTAKTYTTLNPVTNKNKSPRSLIRENYKTYEEKINRGDDTGYTRDEILNMFKDSPVLSIPYESEKRKHVRKSDPTRAVHKNWNSKPANYYEGMLIGDNENQNCFICGKFVENNIDKLYLFDNEDQKLHRSSPQKKSPRQLKIICERCLGENFKPCRMKGPNQCLNPDEYLVIRNNQQYIFQKTNKIDFISKFMNDTGRKSKDTVSKQRQEKEKVEFVKVEIGSDGEIVTKPLDNEPRSSDDVIIVKDDGRDSSSDVEIVLTPEIDENIVDHLDDADEEVKEFLGKYQCDTLTTTELKCRFCERVFSDIASVMDHVDEHKHDWDEGVVYPCPICEYGYANAGWLKGHLKAAHDNDKAIVKKEVIEDNKNENVSKSPTDSPVAKRTRSSDKKTDDNSFETESGAKPADEKRSEIPETSTASGFVIKTEVKQEALDISDDEIWIVQTGDETNEQLKSLLNAAKGCQKETAPTGISKKIKHKCFTCSRIFANEESLNTHTCRRRGRRRKLSSKEDNVICVPTQKDFIKRAQGRSKPAAQSDNNLLVPRTARKKTKGPTTSDPHIVTCDDCNESFTSKVRLKFHMQFHSTNNMLTSDGRYKCPECSDSTFDAEVALFDHVHFRHHKRRRWQCPVRACGKTFHLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICSKQLTRRSRLRMHLRAHEEELTPKLILVCVVCSRAFRDHDDAQTHATKSTECIEEFTKDLKKETEEVTAQLSPTSGLVKGPARAESPKLNKPIPRQVSSPLARPLLEILPDEARSLVRVVEIEKAFRCEFCEDVFYLEDGLNSHRAIHKNVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPLADAKRQAWGPNAGPSAAGILGYGGFPVAKHFLCEDCGRSYLHWTYLQVHRRIKHANDNFLYKCTQCNDMTFPNSWSLAYHRKKIHGQLGNAIATSKIPREDYRIPCRDCDEILPNKTALYKHRKKEHSDMSLTLNDNPGTSCSCGKQHAAQCGDNVGHHSEINKHVDGGAWRRSHACSVCGHTFRSASVRDEHLRTHTGERPFPCDLCGLAFRRSTAMRNHRLIHTGVRAWACSRCPKRFRIRSELRTHLRLKHPAHLAVIEIRGLNPTPDEVLEHLRANNIAHDKVIEITKMSFAKGTSSIIPNCARALAMLGNVPRTPVAYSKPLIGASDFQPARRGRGIAKNPRRPKILQRSEETADQNNYPVIDAPGNLTDAEVQMLLRDGVLVDGSQMVQLQMSDNLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00284831;
90% Identity: iTF_00284831;
80% Identity: -