Astr026948.1
Basic Information
- Insect
- Agriphila straminella
- Gene Symbol
- NCOR2
- Assembly
- GCA_950108535.1
- Location
- OX467323.1:3104744-3142684[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-08 2.6e-05 25.2 0.0 1 43 492 534 492 536 0.97 2 2 0.82 1.2e+03 0.6 0.0 10 31 614 635 613 640 0.86
Sequence Information
- Coding Sequence
- ATGGACCGTTTCTCGGATTTTTCGCCGAAGAAAAATTGGTCTGGTGACACAGGTCATCCGCCCGACAACCGGAAGGCTTCGATGGCAGGGTTGGTACCCACCCACATAGGTTCGCGAACTTCCGCGCTCTGCGAACCTGCAACAGTGCGCCAAGTGTGTGCGTATGCGAATTGCGAAACTTGGTGCGCGCTCCGCATTTTGCGATCCAATGCGAAGAGAAGTGGAAGTTCGAAATTTAGCGTcagGCCCGGGCAGACGGATCACGGGCACGGCGGCGGCGCCCTGGCGTACGGCGGCAAGCCGGCCGGCGCCGTGGTggcgccgccgcagccgcgcgcCCCGCCCGCAGGCTACGCGCAGCCATACTCGCCCGCGCTGCGTCTACACCAGCCCGGATATGGATCTGCTGCGCTCACATTCAGGGATGGCAACAGCTAcgtgcgcggcgcgggcggcgcggcgggcgagTACCGCAGCGGGCGCGTGTCGCTGCTGGGCGGCGCCTAcctgccgcccgccgcgccgcagcAGCACCACCCGCCGCCTGCCGACCCGCCGCCCTTCAAGAAGATCAGGTTCGGCGTGGAGCGCCCACCGCCCACGCCGTTACCGATGCACCAGCCCCTCAGGGTTGATACTAGAGAGTCGGTGAACTCGTATAATACCGTGGAGCTCTCCCCCAACCCCCCCTCCGAGCCCACGGTGGAAGACCAGAGCTTCCGCACCACCAAGGATGACCTCCTACAACAGATATCTAAGGTTGACCGCGAGATGGCGTTGTCCGAAGCGACGCTATCCAAGCTGAAGAAGAAGCAAGAAGAGCTCGAACAGACAGCGTCAAAGCCTGCCCGTGCTGAAGAGCCCGAAGAAGCGGTTCCACGACATCGAAGTTTAGCGCAATGCGTATATGCAGACAACAGGAAAAAGGCGTCATCAGCACACGCGTTGCTCTCCCACCTCGGGCCCGCGGTGCAGTGGCCGCTATACAACCAGCCGGCCGACTCCACCGTCTACCACGAGAACATCCGCCGTCACCGACAGTTCCGCCGCCGCCTCGCCGCGCACATACACCGCCTCAAGCGGGAGGCGCACAAGCGCGAGGAGAAGCTAGCGGAGGCGTACAGCGCGCGCGCGGCCGAGTGGCTGCGGCGCGTGGAGCGCATCGAGCAGGGGCAGAAGCGCCGCGCCAAGGACGCGCGCAACAGGGAGTTCTTCGAGAAGGTGTTCCCCGAGCTTCGGAAGCAGCGTGAGGAGCGCGAGCGGTTTAACCGGCTCGGGGCCCGCGTTAAGTCTGAAGCGGAACTTGAAGAGATAGCTGATGGTCTACACGAGCAGGAGCACGAAGACAAAAAGATGCGGTCGCTCACCGTCATACCGCCGCTGCTGAGGGACCCCAGGGACACCACGCCGCTGTATATAGATACCAACCGACGGTGTATGGACATGGAGTCAGAACACAAAGGCCTACAGAACCGGAACGTGTGGTCGGCGGCCGAGCGCGAGCTGTTCCGCGAGAAATACCTGCAGCATCCTAAGAACTTCGGCCAGATCGCCTCGTTCCTGCCCAGGAAGAGCGTCAGGGACTGCGTCAGGTTCTACTACCTATCAAAAAAGGCGGAGAACTACAAGCAACTCCTGCGCAAGCCCCGCCAGCGGCGGTCGGCGCGCaacccgccgcgcgccgcgcccgAGCCCGACCTGCCCGCGGGCGTCACCACGCGCCTGCAGCGCTCGCAGGGAGTGACGCAGCGCACGAGTGACAAGGAGCCGGGCTTAGAAGAGAGCATGGCTTGCGGCatgccgcccgccgcgcccgcgcccgcacaCCCAGCGAGGTTACAAACCATTTACGATCAAGTGGCTAAATTGGGGGACGATCccattaaaattgataattttctAGGAGATGCATTTACGTTAGATACGTTAAGAAATGATTTCCTAAAAACAATTGAGGAGCGGAATGAGGTTCAGCTTTCAATAGCTGACGGCCCCACCCCTTCGTATAATTCAGCTATAGCATTCGAGCAAGTGTTCGCGAAAATTAAGTACAAAGTGCACCAGTTAACGGCACCAAATACTCAAAAAATGAGTGGTAACGTTGGCGATTCCGAGCAATATAAAGATAGATTCGCTAACGAATTGAGAGATAATCACATTGAGTGGAAATTTAATCCAGCTTCTGCCCCCCACTTCGGTGGTATTTGGGAGGGCAACATTAGGAGTGTCAAAAGTCACCTGTCCAAAATTGTAGGGACTCAATTGTTAACTTTCGAAGAGATGACAACTGTTATTGCTCAGATTGAGGCTATTCTCAATTCAAGGCCACTATCTGTACTTAGTAGTGATCCTTCAGAGCCTCAGGCGCTCACACCCGCTCATTTTCTGGTCATGACGCCCTTAAAATCCCTGCCATCCGAAGATGTGAGCACGGAAAAGATAACGCTATTACAGCGAAAACGCATTGTTGATCATCTCGTACAATGCTTCTGGAAGCGGTGGAAGGTGGAATACCTTAACACCTTGCAAACTAGAGCGAAGTGGCTCACACCGAGCTCTCCCGTGCGCGAGGGCACAATTGTCTTATTGAAATCAGAGAATAGTGCTCCTCTAAATTGGCCGTTAGGTATAATCGAACGTACTTTTCCAGGGAGGGACGGAATATCCCGTGTCGTCGACGTTAGAACTAAGTCCGGTGTATATCGCAGACCGGTTGTGAAAGTCATTCCGCTTCCCAATCAATAA
- Protein Sequence
- MDRFSDFSPKKNWSGDTGHPPDNRKASMAGLVPTHIGSRTSALCEPATVRQVCAYANCETWCALRILRSNAKRSGSSKFSVRPGQTDHGHGGGALAYGGKPAGAVVAPPQPRAPPAGYAQPYSPALRLHQPGYGSAALTFRDGNSYVRGAGGAAGEYRSGRVSLLGGAYLPPAAPQQHHPPPADPPPFKKIRFGVERPPPTPLPMHQPLRVDTRESVNSYNTVELSPNPPSEPTVEDQSFRTTKDDLLQQISKVDREMALSEATLSKLKKKQEELEQTASKPARAEEPEEAVPRHRSLAQCVYADNRKKASSAHALLSHLGPAVQWPLYNQPADSTVYHENIRRHRQFRRRLAAHIHRLKREAHKREEKLAEAYSARAAEWLRRVERIEQGQKRRAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVIPPLLRDPRDTTPLYIDTNRRCMDMESEHKGLQNRNVWSAAERELFREKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRQRRSARNPPRAAPEPDLPAGVTTRLQRSQGVTQRTSDKEPGLEESMACGMPPAAPAPAHPARLQTIYDQVAKLGDDPIKIDNFLGDAFTLDTLRNDFLKTIEERNEVQLSIADGPTPSYNSAIAFEQVFAKIKYKVHQLTAPNTQKMSGNVGDSEQYKDRFANELRDNHIEWKFNPASAPHFGGIWEGNIRSVKSHLSKIVGTQLLTFEEMTTVIAQIEAILNSRPLSVLSSDPSEPQALTPAHFLVMTPLKSLPSEDVSTEKITLLQRKRIVDHLVQCFWKRWKVEYLNTLQTRAKWLTPSSPVREGTIVLLKSENSAPLNWPLGIIERTFPGRDGISRVVDVRTKSGVYRRPVVKVIPLPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -