Astr025830.1
Basic Information
- Insect
- Agriphila straminella
- Gene Symbol
- Arid2
- Assembly
- GCA_950108535.1
- Location
- OX467322.1:5026439-5047590[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-18 1e-14 55.6 0.0 2 89 17 101 16 101 0.92 2 2 4.6 1.5e+04 -2.6 0.0 71 85 641 656 620 657 0.68
Sequence Information
- Coding Sequence
- ATGGCAAAATCTCAAATAAACACCAAGTCAAGCAGTTATTTAAAGGATAAAGAAGCTTTCTTGAAAGATCTAAAGGCGTTTAATGAGTCTAAAAACATCACTTGTAAACCCGCAATAGTGAATGGTATAGAAATTGatctttttcatttttactcATTGGTGCAACAGAGAGGTGGACTTGGCAAGgtCAACCAGTATGATACTTGGGAATCATTTTTGCGACCATTGAGGTTACCGCACCCATGTGTAAACGGTTCTACATTACTGAGAAGACTTTATGGCACACATTTAGAAAAATATGAAAGAGCAAAAGGTCCTCCTGGCAGAGATGACGACATGGATATCGATGAGGATCCCCGCAGGAGCCGCGCGGGGGGCATGCCGCGAATCTCATTCGGTGGTGGTATTTATATCTCAGCATCCGGTGAAACTCTCCGCACGGGCACCCGCGTAGCAGGTCCTTCGGAGAGACTTGCTCTCTCCCTCTTATCGCCGATGCCGAACGAGCAAGATTTCGCCGTGAACGTGTGCACTGTACTGGCCGCTGATCATTCTAATAGACTGCCTTTGTCGACTACGCCGCATATTCTGGACTTCTTGCTAGCACATGCTGGGGTTTATAACCATTCGAGTCTACGGGACACAATCGGCCGTTCCTACTTTGAAGCCCGAGGCCGCTTCCCAGACGAGTTCTGGGAGATGCGAGCGGGTGGCGGAGGCGCCCGAGAGTTAGCCGACGAAACTAAGTTCATGCAACCAGGACTAGAGCAACCGGAGCTCATGGTGCAAGCACTCGCGGCTCATAATACGCTCACGGACTGCTTGATGCAGGGGACTGAAGAGGAGCAAATGCGGGACAAAGTAGTTTATGATGATATATTAGAAGACTGGGTTACGGAACCATCAGAAGAAAGTCAGTTGTTCGCCCCAGAGTTGCCAGGCGGTGCGTCTTGTGTGTACACACAGAGAGTACTCCAGATCGCCTCTATTGTCCGCTCGCTGTCGTTCCACGATGAGAATGTCCAGTATCTGGCCAAGAATACTACCCTTATCAGGTTCTTGCTGTTATGTGCCAACTGTTGGGTTGGGACTTTACGGCAGTCCGGCCTAGATACACTCGGAAATGTATCTGCAGAACTTATTATAAAGGACCCAGCGACCTGCCTGATATCCCGGCACGTGTTATCCACTATACAGTCGGCGCTAGTGTCTCCGGATAGAGCTAGAGTGTTAGCGGCGCTAGTGTTGctgaataaactaaaatatGACCCAGCGACCTGCCTGATATCCCGGCACGTGTTATCCACCATACAGTCGGCGCTAGTGTCTCCGGATAGAGCTAGAGTGTTAGCGGCGTTAGAGTTGCTGAATAAACTAGCGCAGAACGAGACTAATGAAGACGCACTGTTGAAAGCTTTGGAGTCTAAGGTCTACACCGATGTGTGTTCGTTGCTAACTCTTCGGGACATAATGGTGTTAGTTTGTACGTTGGAATGCGTATACGCTCTGACGTCATTGGGCGATAGAGCGAGCGAGGCAGTCGCCAGGGTGCCCGGACTCGTTCACACACTGGTCTCGCTTGTTACTGTCGAGgCCCAAAGCTACGGTCCCCGAGCTTGTATTCTCATGAGGGTAGTGGAGACGGTGAGCGGGCCGAGCGCGTTAGCCGCCGTCGCCGAGAGAGACGCCAACAATCAGAGCGCGCAGCAGGCACAGGCGACAGTTCAGCAGAAGCCAGCCGAAGCCGCCCCTTCCCCCGCTAAGGTGCCCtctcccgcgcccgcgcccgcgcccgcgcccgcccccgctcCCGCGCCCGCCAGCACGCTGCAGCAGTCGCACATACAACAGCGGACCGTACAGGAAAACGAGCACTTCGCCCAAGCATGGTTGCGGTCAACGTTCGAACCCCTGCCCCCTACAGACAACACCGCGTACGACACCGCTGAACTATACCGGCAATATCTAGCGTGCTGCAGCAAACTGGGCAGGAAAGGGGTTATCGCGCCTGCGCACTTCCCTAGGCTGGTTAGGTAA
- Protein Sequence
- MAKSQINTKSSSYLKDKEAFLKDLKAFNESKNITCKPAIVNGIEIDLFHFYSLVQQRGGLGKVNQYDTWESFLRPLRLPHPCVNGSTLLRRLYGTHLEKYERAKGPPGRDDDMDIDEDPRRSRAGGMPRISFGGGIYISASGETLRTGTRVAGPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRDTIGRSYFEARGRFPDEFWEMRAGGGGARELADETKFMQPGLEQPELMVQALAAHNTLTDCLMQGTEEEQMRDKVVYDDILEDWVTEPSEESQLFAPELPGGASCVYTQRVLQIASIVRSLSFHDENVQYLAKNTTLIRFLLLCANCWVGTLRQSGLDTLGNVSAELIIKDPATCLISRHVLSTIQSALVSPDRARVLAALVLLNKLKYDPATCLISRHVLSTIQSALVSPDRARVLAALELLNKLAQNETNEDALLKALESKVYTDVCSLLTLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLVHTLVSLVTVEAQSYGPRACILMRVVETVSGPSALAAVAERDANNQSAQQAQATVQQKPAEAAPSPAKVPSPAPAPAPAPAPAPAPASTLQQSHIQQRTVQENEHFAQAWLRSTFEPLPPTDNTAYDTAELYRQYLACCSKLGRKGVIAPAHFPRLVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447950;
- 90% Identity
- -
- 80% Identity
- -