Agen027054.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agriphila geniculea
Gene Symbol
nfxl1
Assembly
GCA_943789515.1
Location
CALSUL010000334.1:1007141-1009615[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1 6.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.0052 3.4e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 17 1.6e-07 0.01 17.6 15.9 3 19 186 202 185 202 0.95
4 17 1e-08 0.00067 21.4 13.3 1 19 237 255 237 255 0.93
5 17 0.28 1.8e+04 -2.4 2.0 6 10 280 284 279 284 0.90
6 17 5.3e-10 3.5e-05 25.5 13.2 1 19 290 308 290 308 0.99
7 17 2.7e-06 0.17 13.7 18.6 3 19 345 361 337 361 0.86
8 17 1 6.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 17 2.4e-07 0.015 17.1 16.3 1 18 395 412 395 413 0.97
10 17 2.5e-10 1.6e-05 26.6 13.0 1 19 422 440 422 440 0.99
11 17 0.0001 6.6 8.6 6.4 9 19 488 498 486 498 0.89
12 17 0.0095 6.2e+02 2.3 7.6 3 12 509 518 508 518 0.90
13 17 0.16 1e+04 -1.5 3.5 14 18 547 551 547 552 0.87
14 17 0.13 8.3e+03 -1.3 0.2 8 12 568 572 567 572 0.79
15 17 1.5e-05 0.96 11.3 3.6 1 11 588 598 588 599 0.97
16 17 3.9e-05 2.5 10.0 14.2 4 18 630 645 628 646 0.87
17 17 4.7e-07 0.03 16.1 10.1 1 18 687 706 687 707 0.87

Sequence Information

Coding Sequence
ATGGCTCGACGTTACCACGATGCAGCCGCAAAGATGCAACAGAATGTCCAAAAGCATTTGAAGGAAATGAAGGACCTCTCTTCCTCTGAAGACGAAGACCCCTACGAATCGAGCGTACTCGATGGCATACTCCAGTCTTACAGAAGAGGAGGTGGCGACGCCAACATGTTGGATAGGACCCGGCATCTGTTGGAAGAGGCGATAAGCGGCAGATCTGTAACCTGCCTCATCTGCATTGGCTCCATCAAACGAGCTGATGCTATATGGACGTGTGACCACTGCTACTGCTATTTTCATCTATCGTGTATACAAAAATGGGCTAATGATAGCGTCAGTCTTAGAAGCGAAGAAACTCACGGCTCTATTGCTGTTTTCGTGCCTAGAAAACTGGAATGGTGTTGCCCTAAATGCCGGCAGGCGTACGCTAAGGAGGAAATACCTCGACGTTATCGGTGTTTTTGTGGCAATAATGACGATCCGCCTTACCACCCTTGGCTGATCCCTCACACATGTGGAGAGGTATGTGGTAAGAGACTATCCTCTGGCGATAATTGTAAACACAAGTGCCTATTGCTCTGTCACCCTGGGCCTTGTCCGCCGTGCCCTCAAACTGTGAATGGAGCGTGTTACTGTGAAAAGGAACGCAAAAAAGTTAGATGCAGTTCTGCAAAGTGGTCTTGTGGACAGCAGTGTAAAAAGTTACTATTGTGTAATTCTCATAAATGTGAAAATATTTGCCATCAAGGCGATTGTCCCCCTTGTAGCTATGCTAGTGTTCAACCTTGTCGGTGCGGTGCTGAAAAAACAAAACGCCCATGCAACAATCCTAATTGGCAGTGCCAGAAAGTTTGCAATAAACCATTTAATTGTGGCTACCATAAATGTTCGAAAGTGTGTCATACTGGTGACTGTGGGACATGTCCCAACTCTGGCACGAGGTCTTGTCCATGTGGTGCTAATCAGAAGTATGTGGAGTGTCCTGATGTTATTGAAACATGCCTAGGTACTTGTGGTAAAAAGCATGAATATTGTGAACATAATTGCCCGGAGAAATGCCACAAAGGGTCATGCCCTCCTTGCCAAGTTTTGATTGAAAAACAATGTCTATGCTCGGCGCATACAAGGATGTTGCCGTGCAGTAAAGAATATAAGTGCGAGACAAAATGTAGAGGAACTAGGCAGTGTGGCAAGCATGCCTGCGCTCGTAAATGCTGTAATGGAAATTGCCCTCCTTGTGAAAAAGTATGTGACAAACCTCTTCAGTGCGGCAGACATAAATGTACCATGGTTTGTCACCGTGGACCTTGTTATCCTTGTCCGAGAGAATCTAAGGTGACTTGCAGATGTAAGGTAACTTATGTTACAGTTCCTTGTGGTAGAGAGAAGCATATAAAACCACCGAGGTGCAGTTTACCTTGCAAAATGAAATACAAATGTGGTCACATTAATGAAAACAAACATTCATGCCACTTCGGTGACTGTCCCCCTTGTAAAGCTATATGCAGCAAGACATATTTGAAATGTGAGCACCAGTGTAAGGCTGTGTGCCATGAATATGTTGCAGTGGTATTTAAACAGGTGGAAAAGCCTGCAACTCCTTGGGAAATCACTCCTCCTAAAACGAAAATAATGACGTTGGACTGCCCTCCGTGCGAGACCCCTGTCTCTGTCATATGTTTTGGAGAACACGAGACAGAAGATCAGCCATGCCATTCTGCTAAACGACGATGCTGCGGAAGGAAGTGTGGTCGTCCTTTGACTTGTGGCAACCATTCCTGTTTATTGTTATGCCATTTGTACGCTGCCAATTCTGAATACCCGAATGTGCCTTATAATTGTAAGCAGTGTGACAGAGAATGCACAGTAAACCGCCCTGCAAAATGTCTTCATAAGTGCCCGATACGGTCATGCCATTCGGGTCCATGTCCACCATGTGAAATATTGGAACGCATTTCTTGCCATTGTGGAGTAACAGAGTTGTATTTGCGATGCCGTGAAATATCTACTGCCACTGAAGATATGTTATCGTGCAAGCAGCAATGCCCAAAGAACTTGGAATGTGGTCATCGTTGCCGGAACACATGTCATTCAGGATCTTGTCAGTTGAGTCAAGTGTGCAATAAGAAGACCAAAGTGTTTTGCCCATGTGGCAATTTACGAAAGGAAGCTCCTTGTAATCTTGTGAGAAATGGAGAAGTAGAAATGGAATGCGATGACTCTTGTGAAGCGAAGAAGATTGCTGCTAAATTGGAGAAAGAGAAAGAAGAGCAGAGATTAAAGGAATTAGAAGAAGAAAAGAACCGTAAAGAGTTGGCAGAGTATGAATGGAAATTAAGTGGgaaaaagaagaaatataaGGAAAAGAGAACGGTTCAGAATGTTgacaataggaatattttacAAAAGTATTGGATTCCTATTTTGGGTATATTGATTGCAGTAGCTGGTGCTCTTTATATGATAATAGAAATCTAA
Protein Sequence
MARRYHDAAAKMQQNVQKHLKEMKDLSSSEDEDPYESSVLDGILQSYRRGGGDANMLDRTRHLLEEAISGRSVTCLICIGSIKRADAIWTCDHCYCYFHLSCIQKWANDSVSLRSEETHGSIAVFVPRKLEWCCPKCRQAYAKEEIPRRYRCFCGNNDDPPYHPWLIPHTCGEVCGKRLSSGDNCKHKCLLLCHPGPCPPCPQTVNGACYCEKERKKVRCSSAKWSCGQQCKKLLLCNSHKCENICHQGDCPPCSYASVQPCRCGAEKTKRPCNNPNWQCQKVCNKPFNCGYHKCSKVCHTGDCGTCPNSGTRSCPCGANQKYVECPDVIETCLGTCGKKHEYCEHNCPEKCHKGSCPPCQVLIEKQCLCSAHTRMLPCSKEYKCETKCRGTRQCGKHACARKCCNGNCPPCEKVCDKPLQCGRHKCTMVCHRGPCYPCPRESKVTCRCKVTYVTVPCGREKHIKPPRCSLPCKMKYKCGHINENKHSCHFGDCPPCKAICSKTYLKCEHQCKAVCHEYVAVVFKQVEKPATPWEITPPKTKIMTLDCPPCETPVSVICFGEHETEDQPCHSAKRRCCGRKCGRPLTCGNHSCLLLCHLYAANSEYPNVPYNCKQCDRECTVNRPAKCLHKCPIRSCHSGPCPPCEILERISCHCGVTELYLRCREISTATEDMLSCKQQCPKNLECGHRCRNTCHSGSCQLSQVCNKKTKVFCPCGNLRKEAPCNLVRNGEVEMECDDSCEAKKIAAKLEKEKEEQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKRTVQNVDNRNILQKYWIPILGILIAVAGALYMIIEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00683858;
90% Identity
iTF_00036304;
80% Identity
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