Agen028455.1
Basic Information
- Insect
- Agriphila geniculea
- Gene Symbol
- grn
- Assembly
- GCA_943789515.1
- Location
- CALSUL010000353.1:669219-672268[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 9.2e-16 58.9 6.8 1 35 43 76 43 77 0.97 2 2 0.31 2.2e+03 0.1 0.4 4 11 103 110 101 111 0.87
Sequence Information
- Coding Sequence
- ATGAAGCCAGTGATTGAGAGAGCGAGAACTTTAAGAATACTTAACACAGCATACTCGTACTTTGATAAAGTCACTACTTATAAACTGAAGTCGCTGCAGagcgcggcgcggcgggcggGCACCTCGTGCGCCAACTGCaagacgacgacgacgacgctGTGGCGGCGGAACCAGAACGGGGAGCCCGTGTGCAACGCCTGCGGACTCTACTACAAGCTACATAATGTGAGTACACTACACTACAAGTATTCAGTATTCGGTCGCTCCAaagcgcggcgcggcggcgggcgggCACCTGCTGCGGTCTGCAAGACGAAGACCACCACACTTTTTTCAACCGCCTTTGTGGTCTTGTGGTTCGCCCATCTGTGTAAGACGCAGGGATACCGGGTTCAATTCCCAGAAGGGGTACAATTTGTACTTGGTTTGCAATTACTTTACGGCGACGACGACGACACGTCGAAGAGCGCGGAAGCCGCTGAATGGTATTCTTGCTCTTGTCTAGTGGGTGATGTTTCCAAAGAAGGAAAGAGAAAAAGGAAAAATGCATTGTTAGGTGCGCCAAAGTAG
- Protein Sequence
- MKPVIERARTLRILNTAYSYFDKVTTYKLKSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVSTLHYKYSVFGRSKARRGGGRAPAAVCKTKTTTLFSTAFVVLWFAHLCKTQGYRVQFPEGVQFVLGLQLLYGDDDDTSKSAEAAEWYSCSCLVGDVSKEGKRKRKNALLGAPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -