Agen015678.1
Basic Information
- Insect
- Agriphila geniculea
- Gene Symbol
- ZNF711
- Assembly
- GCA_943789515.1
- Location
- CALSUL010000187.1:662313-685892[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.012 2.4 10.5 1.8 2 23 103 124 102 124 0.96 2 12 0.26 53 6.3 0.2 2 23 131 153 130 153 0.90 3 12 0.032 6.5 9.2 0.1 2 23 161 183 160 183 0.90 4 12 0.00015 0.03 16.5 4.3 1 23 189 211 189 211 0.97 5 12 1.1e-06 0.00023 23.2 4.0 1 23 217 239 217 239 0.96 6 12 0.0056 1.1 11.6 1.1 1 19 245 263 245 266 0.96 7 12 0.025 5 9.5 0.1 3 23 284 305 283 305 0.88 8 12 0.0021 0.42 12.9 8.2 1 23 652 674 652 674 0.98 9 12 0.00025 0.051 15.8 1.9 1 21 681 701 681 704 0.90 10 12 0.007 1.4 11.3 0.8 1 23 712 735 712 736 0.96 11 12 0.0038 0.77 12.1 3.9 1 23 741 765 741 765 0.97 12 12 4.2e-05 0.0085 18.3 1.2 1 21 771 791 771 792 0.94
Sequence Information
- Coding Sequence
- ATGTTGCACTACTTCTGGCAAGTCATTTATCATCAATATGAACTGAAGAGGCCCCAGATTGCTTCCCTGACTTACCCCCGATCTAGTGGGGTATTTTCCGGAACTGTTTCCGGCGTATTCTACATACTGCTGCCTATCCTGCATAAAACTGGCAAAAAAGTTCAGTGTGGGTTTGTAGATTCGGAATCAGCAGACTCTGCGTTTAGAATAAAGTCTCACGAAGGTGGCTACGATGAAGTATTAGCTCAATTTCTCTCCGGGGACGAGCCCTTGGAAGAGCCAGACTTGAATGGTCCAACGACATTGCATTGTGAAATATGTAGAAAACAATTTGATAATGCAAAAAAATACTATGGACATTTACGAGTGCATACTAAAGACAATCTTTGGGTTTGTGaacGATGCCCTGACCTAAAGTTTCCAACAAAACAACAATTGATGAAGCATAGTCTGATTCACCAACCCCTGGAGCGCGTGTGGCGCTGCCCACAATGTGAAATGGCCTTCGAGTCTCTGTGGCGGCTCCAACAGCACTTATTTGCCAAACACCTTGACTACAGACCCCACAAATGTGAAATATGTGAAAAGTCATTCCACAAACTTTCTGATCTCAAGAAACATAAAGCAGTTCATAgtggtAAAAAGAAGCATGCATGCACAGAATGTAAAATGAAGTTCAAAGATAGATCGAATTTGAAAAGGCATATGCTAACACATAATGGAGAAAAGCCTTTCTGTTGTGTCGGGTGTGGTAATAGATTCAAACAGttggcTTCATTGAGGCGTCATTGTCAGTATTGTAACTTTATTAAACACAAGGTTGAACAGAATTCAATACGGAAGAATTACTGCAGAGTGTGTGGAATCACCTTTCAGTATAGAAGTGCTTTACTGGAGCACAGTGTTAGGGCACATACAAATACATCCACAGTAGAAACAATTCAGAAAACCAATCAAATCACAATAGATACTAGAACGGAAGATAATATTGTAGACGATATTTTATCTGCAGAAGATGACTACCTGACTATGCCTACACAAAATGGCCTCCTTAACGTCCACTATAACATACCTCAAGAACCAAATGTAGATAATATGACAGATATGAGCGTCGCAAACATGTTGGATGATGAACTATTTTACAATGATATAGATTTTGAGAGTTTTCAAAGTGGCCACATGTTTAATATGAATACTAATGACTTAGACTATAGTACTAATGATAGAAGCGTAGACATACAATTCGATTTTGGAGACTATAACAGAAGTATTGATCAAGACCTAATGAATGCACTCTATCAAGGTAAAGCCGAGAACCTGCCAGATGAACTTTTGAATGCTCCTGATGTAACTAATTACACTGTGGAACCTGGAAATTTGCTGGAAAATCCTGCAGTATCCGTCAATGAATGTGCTACTATATTTGAAAGTGATGTGGATTTAGAAGCCAGTGCTAATTTGACTGCTAATTTAAATCAACTTATTGGTGAAAATAATGTCCAGTATATTTCAACTGAAAATGATGATACATTTATTATAAGTTTAAAAAGTGGGATAGATGTGGAGCAGTTGACAGACATGTTGAATATAGGTGTGGAATTAGTAGATCAGAATAATAAACCAGCAGATGATTTGGTAGAAAGCATCCATGAAGAGCACAATTCAGATTGTGCTATAAGCAGTGCTGAGCCAATAGTTATAACAATTGAACAACCTGTTGAATCAAAATGTTGTACAAATTCAAATGAGATAAAAAGCAGTACTGAGGCAATAGCCATAAAAATGGGACAGCCTGTTAAATCCATATCTTGTATAAATTCCAATGAGAAAGAAAGCAGTGCTGTGCCCATAGTCATAAAAATTGAAGAGCCTGTTAAATCCGAATCTTGTACAAATtccaatgaaaaagaaaataacccAGCTAAAAAGTGTAAGATAAAAAAGCAATTGACATTTGTCTGTCGCCATTGTCACAAAGTTTTCCATAAAAAGGATAACTACAAATCGCACGTTGCTACTCACGATTCATCTCTGCGACGCCACAAGTGTTCCGTGTGCGATGCTCGCTTCAGCTACCGCTCCACTCTCACCAAACATTTTGCAGCAATGCACGAACCAAGAGTGCGAAATGCTTTCACATGTGATATTTGTGATAAGCAGTATAACGCCAATTGGATGATAAAAGACCATATTCAGAGAGACCATCATGGACTAACACCATACGAGTGCGACAAAAAAGGGTGCGGAAAAAAGTTCTTCAAAAAATGCGACTTGGTTGTTCATAAAAGGTATCACACAGGAGAGAGACCGTTCGCGTGCGACATCTGTAACTGGCGCTTTCAACACGCCTCGCATTTACGACGGCACGAGCGCTCTGTCGATTGCACTAAACGTATTGTTGGTACGATCCGGCCTGCTTTCGCGGGCCGGATTGTTGGTGCTCGCTGGCCGGAGCTGGCCCGCGGGCCGTAG
- Protein Sequence
- MLHYFWQVIYHQYELKRPQIASLTYPRSSGVFSGTVSGVFYILLPILHKTGKKVQCGFVDSESADSAFRIKSHEGGYDEVLAQFLSGDEPLEEPDLNGPTTLHCEICRKQFDNAKKYYGHLRVHTKDNLWVCERCPDLKFPTKQQLMKHSLIHQPLERVWRCPQCEMAFESLWRLQQHLFAKHLDYRPHKCEICEKSFHKLSDLKKHKAVHSGKKKHACTECKMKFKDRSNLKRHMLTHNGEKPFCCVGCGNRFKQLASLRRHCQYCNFIKHKVEQNSIRKNYCRVCGITFQYRSALLEHSVRAHTNTSTVETIQKTNQITIDTRTEDNIVDDILSAEDDYLTMPTQNGLLNVHYNIPQEPNVDNMTDMSVANMLDDELFYNDIDFESFQSGHMFNMNTNDLDYSTNDRSVDIQFDFGDYNRSIDQDLMNALYQGKAENLPDELLNAPDVTNYTVEPGNLLENPAVSVNECATIFESDVDLEASANLTANLNQLIGENNVQYISTENDDTFIISLKSGIDVEQLTDMLNIGVELVDQNNKPADDLVESIHEEHNSDCAISSAEPIVITIEQPVESKCCTNSNEIKSSTEAIAIKMGQPVKSISCINSNEKESSAVPIVIKIEEPVKSESCTNSNEKENNPAKKCKIKKQLTFVCRHCHKVFHKKDNYKSHVATHDSSLRRHKCSVCDARFSYRSTLTKHFAAMHEPRVRNAFTCDICDKQYNANWMIKDHIQRDHHGLTPYECDKKGCGKKFFKKCDLVVHKRYHTGERPFACDICNWRFQHASHLRRHERSVDCTKRIVGTIRPAFAGRIVGARWPELARGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00284816;
- 90% Identity
- iTF_00284816;
- 80% Identity
- -