Basic Information

Gene Symbol
-
Assembly
GCA_943789515.1
Location
CALSUL010000086.1:1015105-1035645[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-13 2.6e-09 39.1 0.0 3 89 216 284 214 284 0.91

Sequence Information

Coding Sequence
atgaaacagGATGAAGTCTTAGCGATCAACGACAAGGTAGTGGTACGTGCAGAAGACCTACTCAGCTGGGTGTGCGACGGCACGGGATGGCGGTGGGGCCTGCGCGCCGTGTGGCGGGGGGCCTGCGCCCCACCGCAGGACTCACGCCCCACGCAAGCTTTGCATCAAGCGAAGTTAGACTTCAGTGATGTGGACCGAGAAAAGAGTGCCATAGtGGATACGGAAAGTCCAGGTGTTGTCGTCTTCTCGTATCCGCGGTACTGCCGCTACCGAGCATTGCTGTCCCGCCTGGAGGGGATCCAGGGGGACTGGTTGCGGGATTCGTTAGTGGCAGCCCTGGGGGGGTACGCCGCTCCTACTACTAACACAAGGATACTGTATTGCAAGGACACGTTTGAGTACCCTGAGTTAGAAGGGCACGAGTTCGTGTGCAACGAGTTGGCCCCTAAACTAAAGGGCCGACCTCgaggccgccgccgccgcgcctcGCCCGACGCCTCCGCCTCGCCCGACTCCGAGCGGGAGTCTGATAATGAAGTGACAGTGCCACAGGTGCAAATTCCCCGCCGTCGACGCCTGTCCCTTCGCAATGGCGCCGAGAAGCACTCGGAAGACGAAGAACAACACCAGGACACGGTGGAAGATCGCGCGTTCCTGTCCCGCGTGAGGCACTTCCACAAGGAGAGGGGGGAGCCGGCGCCTTTGAAGGACTTGTCGCTCCGGTCGTTGTACTTGCGCGTGCGCGCGCGCGGCGGGTACTCGGCGGTGTGTCGCCGGCGCCTGTGGCGGGGCCTCGCCGCGCAGCCGCAGCGCGCACGCGCGCACTATGAACGATACCTCCTTCCGTTCGAGAAACACGAGTCCCGCCATGGTTCCCGTCCCCCCAACGGGATGAACGCTATGACCGTAACCACCATCGAACTGAGGGACTCGCCACAGAGGGACTTTCATCAGATGGACCCCGAACCAATAGAAACTAAAGAAGAAttaaattttgtatcaaaaccGGCGGAAGAACTGAACAGAGAATTCTTAGAGTCGCTGCCGAAAGAAGAAAAGTGTGAGAAACCTTCAAAAATAACAGTGAAACCTGTGGAGCAGCTTGTAGACGATAACAGTGTGAAGTGTAGTGACAGTGAAGTGAAGTGTGACGTGAAAAATGTGATAGAAGAGGGTGATAAGAGACTTAGTGATGGGAGTTCGAACGAGATAGTGAATAGATTGAATTTAGGTACCCCTGACAGCTTCATACAGGATACTAGAAGTCAACCAGAGTTCACCTCCAGCTCTTTAGCAACTTTGTCCGCGCTCGGAGACAAGTACAACGGGCACGACACACAGCAGGACCAGAAGAGCAGTCGTCCCCTGCCGGCGGGGCGCAGCTCCCTGCGCGCCGTGCGCGTCAAGCCcggcccgcgccccgcgccccccgcgccccccgccTCTACGCCGCCCACGCTCCCCAGCTCCACTGCATCGGCAGTAGTCAACAACTTCGGCATAATAGCGCCTACGCTCCCTAGCTCCACGGTATCATCAGTAGGCAGCACCACGAGCACATCCTCCATCAACAACTTCGGCATCCATcgcccgcccgcgcccgcgccgcccgaCGACGACGAGATCATAGAGGTCCCCTACAAGCCAAAAACCCCCGAAATCATAGATTTAGACGAATACCCCGAAAGCCCCCAgtcaataaaaaagaaaaaactagaCATTCTCAAAGAGAGAGGGCTCGAAGTTACCGCCGTCCCTTTCTGGCCTTTAGCCCACCTCACGGGCCAAACGCCCCCCCTTATAACCCCTGCCCCCATGCTTATAAACCCCGCCATGCAACACCAAATAACTACCCAAGCATCCCTATTCCAAATGTACAACATAATCCCACCAAATTATAATGGGGGTCAACCCCCAAAAGTCATACAAGGGACCGGAATTTATGGGTCAAGTGGACCCGAAAAGACTGTGTACGGCAACCCTAAAGACCCTTTTATGCCCCCACCACATGTCTTACATGGTGTCCCTTTAAAACCAGCTAGAACTGTACCCCAAACGAATATACCCCAAGATATTTTAGACTTAACGTGTAAAACAGATTCTCCGAAACCAGCAGTTGAAATAGTTAGGGTTCCTTCAACACCTTCCCCATCTAAAAATAACCCccaaaatttaagtaaaaattacAAACTAGTCGATGGTAAAGCAGTTGTGGGTTCAAATTTAGAAATTACTTTAGTAAACCCTAAAAGTCAGACCCCAAATAAAAACAGAGCCCCCCAGAAACGGTCTTCGAACGGCAAGTTCATGTCTAGTAAGACCCCCACACCCCCTAAAGAGGCGAGGTCTCAGCCTTCGCCTTCGGGTCCTAAGAAGAACCCAATAGTCGTCCCCAATTATCAAATCAATGCGAGAGATGATGTGTCGCCGACCAGTTCTACTGGCTCCCGAGACAGCCAACCGAGCCAACCCACCCTAAGCAGCATGCTCGCCGCGCAGGGGGGGCTTGCGCTGCTGGGGCTGCAGAAGGGGGGCTTCGGGGGCGTCGGGGGGGGCTTCGGGGGGGGCATGGGCGCCGACGGGTACGCGCGTGCATTGTACCAGTTGGGGCATTTGGACCCGAGGCATTTGGCCGCGTATAGGGACGTGCTGGCTAATCAATTTAGAGGTTAG
Protein Sequence
MKQDEVLAINDKVVVRAEDLLSWVCDGTGWRWGLRAVWRGACAPPQDSRPTQALHQAKLDFSDVDREKSAIVDTESPGVVVFSYPRYCRYRALLSRLEGIQGDWLRDSLVAALGGYAAPTTNTRILYCKDTFEYPELEGHEFVCNELAPKLKGRPRGRRRRASPDASASPDSERESDNEVTVPQVQIPRRRRLSLRNGAEKHSEDEEQHQDTVEDRAFLSRVRHFHKERGEPAPLKDLSLRSLYLRVRARGGYSAVCRRRLWRGLAAQPQRARAHYERYLLPFEKHESRHGSRPPNGMNAMTVTTIELRDSPQRDFHQMDPEPIETKEELNFVSKPAEELNREFLESLPKEEKCEKPSKITVKPVEQLVDDNSVKCSDSEVKCDVKNVIEEGDKRLSDGSSNEIVNRLNLGTPDSFIQDTRSQPEFTSSSLATLSALGDKYNGHDTQQDQKSSRPLPAGRSSLRAVRVKPGPRPAPPAPPASTPPTLPSSTASAVVNNFGIIAPTLPSSTVSSVGSTTSTSSINNFGIHRPPAPAPPDDDEIIEVPYKPKTPEIIDLDEYPESPQSIKKKKLDILKERGLEVTAVPFWPLAHLTGQTPPLITPAPMLINPAMQHQITTQASLFQMYNIIPPNYNGGQPPKVIQGTGIYGSSGPEKTVYGNPKDPFMPPPHVLHGVPLKPARTVPQTNIPQDILDLTCKTDSPKPAVEIVRVPSTPSPSKNNPQNLSKNYKLVDGKAVVGSNLEITLVNPKSQTPNKNRAPQKRSSNGKFMSSKTPTPPKEARSQPSPSGPKKNPIVVPNYQINARDDVSPTSSTGSRDSQPSQPTLSSMLAAQGGLALLGLQKGGFGGVGGGFGGGMGADGYARALYQLGHLDPRHLAAYRDVLANQFRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00035426;
90% Identity
-
80% Identity
-