Agen048971.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agriphila geniculea
Gene Symbol
jarid2b
Assembly
GCA_943789515.1
Location
CALSUL010000771.1:100659-110416[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-19 5.4e-16 60.5 0.0 6 89 833 913 829 913 0.92

Sequence Information

Coding Sequence
ATGCGGTTTCTGGCCTGCTGCAATAGCTCTGGTGGATTTAAACATCGGTACTCTTTCTTCTCGAAAGTACAAGCCCAGAGGAAATTTGCGCTAGGAGCTTTCGTCCCACCTAGCGCAGCCTCGAACCCACCGCCCGAGCGACGCCCTGCCCCCAGCGAGCCACCTCCGACGGAACAGAAAAATGTATATTACAGCAAAATGTCTGCTGATATGCTTTTGGACGTCATATCTTTTCAAAATTTGCACAAACAACCAGAGCCTGTGGTAATACTTAAGAGGTTGGGTAAAATACAAAACCCAGGTCCTCCTGCACCCGCTGCGCCCGTCAAACAGGAACCATTACGGCAGAGAGTTGCGCCCGCTGCAACCACCAAATCCGCAAACAAAATGAGGCTGCGGTCTCGCCCTAGTTTTAAAACACAAGTAATTAAGAAGCGGGTCAGTCCTCCGTTTTTGAGGAAACGCAAAATGCCGCCCCAAGCTGTGCCGGACAGCTCTGACTTAGAAGATGATCGGCCACTCAAGTATTTTGCACGAACAACGGAGGTACCAAGGCGGCAACTTAGGATAAatGCACAAGCCAAAAAAGTTAAGTCAAAGGTTGAAAGAAAACCATCCAAAGTCATACCAGCAATCAAAAAAATCCAAAATGTGAACAGACGAAGAGAAGCTACAATTAAAAAACGTCGACTAACAGTTGAAGCTAAAAATAGGAAGAAGTTATCAGTCGGTCATAGCGCAACGCACTACAGTTCAGACGAAGGGCTTCCTCTGCGCTCTAGCTCTGACAATGTGCCTCTGTTGCGCTCTAGCTCAGACAATATCCCGCTGCGTTCAAGCTCTGACAATATGCCTCTGCTGCGCTCCAGCTCTGACAATATCCCTCTGCTGCGCTCTAGTTCTGACAATATTCCTCCGCTTCGCTCTAGCTCTGACGAAGAAATTTTGTCGCCCGAACCGTCGAAAAAGAAGTACTCTCCTACAAAAGTTGactccaaaaataaaatatcagtcGAAGGCTGGCTTGACGATGCAGATAAATCTACTAGGCTGCGTAAAACCAACGGCTTCAAGATGCCTCTAAGACCGAACCGGAGACGTGACACTAAGGAGGATGATAGCAAAGCTGTGGTAAAAAGGAAGATTGGAGCGAAGCTGCTAGAGAAGAAATTAAgagcaaaaaaacaaacagccGCCATCGTTAAAGGCGAGGAAGTACCTAAAAAAGCAGCGAGCGAGCCACCGCCACCGTCTATTGAAGAATCGGTTAAAGATCCAGTTCCAAAGCAAACTTTAACAGAAGCGTCGCTATGGAATCACAACGGGCCGAAATCCCACAATATCCGTCATCACACTTCCGTAGAAGGGTGGCTTAAGAATTCTGTCGATGCATCGATGGGCATCGTTGCGTCCCCGGAGTTGCCAGCTGCAATAGACCCGGTGCTGAGAAGTCGCAGCGTCGATTCCCTGTGCCCCTCGGAGCGATTTAAATCAGTGCGCGATATCGTGGACGCTTCCGAATGTGATTTAGAAGCAGGCTGCAAACAACGCTTGTGCCAAGCTTGCTGTAGAGTCAATAAACTTCGACAGCTTAAGAATATGGTGCAGAGGAGTACGGGGCGGCCTGATGACGTATACGAGTTCAATGATGACGCTTCCGTTGACTCGATGCGCGTTTATCGAAGACGTCCGACAGCTCCGCCTCCTTTGCCCGCTTCCGTGCCTTCGCCCTTACCAGCACCTATACCCGCCCCCTTTCCCCGCACTCAAGACCCCGTTTACTTAGATATACTTCCAAACGGCAGCCACATAATTCAAATCACTAACCTCAATAAACGAAACACTATAATCAGCGCGAAAGTGATACCTAAAACTAAAGCCGAAATAAGGAATGAGTTCTCGCTGATCGAGCACGAAAACTTACTGGACCAATTACTTACAAAATTACAGGGGGGTGAGAAGCTGGAAGATCAGGAATCAAAAAATACGCCCACCCAAGAGAGTAGACAAGAGGATATAAACGGTCAGGCCTCGACTAGGACTAGTAGACGTAAAGAACCGGCGAAAGTTTTTAAGCTTTCCACTGTGAATCAGAGTAAGCCAGTTCAACAAATCAAACTAGAGGAGCCGAGTACTTCTAAAAAAAGTATTGAACCTTCTCCAAGAAGCGGTAGACGAAGTCTTCCTAAGAAAGCCAGCGAACTAAGTGTCAGTAGTGGGGAACAAGCTGCCCCCGAAGCAGCTACACCTTTGGCGAAGACGGATGAGGGTAACCTGTTAGAAGCGCCTGTCTTCTATCCCACTGAGGCAGAATTCACTGACCCGATAGCGTATTTCGAGAAGATATCTTCAGCTGCAGCGAAGTACGGCCTCTGTAAAGTGGTGCCGCCGGCGGGATTCCGGCCGTCGTGCTCGGTGCCGGACGAGATCCGCTTCAACGTGTCGAACCAGTACATCGCGCGGCTGTACCGGCGCTGGGGGCCCGCCGCGCGCGAGATGTGCGCCATCCGCGCCTACCTCGCCGACCAGAGCGTCATGTTCGCGCGCTCGCCGCTCTACGAAGGTATCGAAGTTAACCTACCGAAGCTGTACCATATAGTGCAACGTAACGGCGGGCTTAAGAACGTGATAGAGAAGAAGCGCTGGGGACGCGTGGCGGAGGAGATGCGTTACACGCGCGCGCCCAACGCGGAGAAGCGGCTGGACCAGCTGTATGTCAAGTATCTGCTGCCCTACGACACGCTGTCTGCGCAAGAGCGGCAAGAAATAATGGTAGCAGTAGACCGCTGTTGGAACAAGAAGAATCAAAAAATGCTCGAGCGGGCACTGAACCCGTTACACAGACAGAAGCGTCTGCTAGGCGAGTCGGATTCCTCCAGCGACGAGGCGGAAGAAGAAGGCAACTTGGCGTGGGCACTCGCGGAGGCCGAGGACTGCGTGGTGCAGGGGCGGGCCATGACATTGGCCACCTTCAAGAAGGCGGAGGGGGAAGGCAACCTGGCGTGGGCGCTCGCGGAGGCCGAGGACTGCGTGGTGCAGGGGCGGGCCATGACACTGGCCACCTTCAAGAAGGTAGCAGCAAACGCGATGGAGACCCTACTCCCAAGTACGGAACAGCCCTCGCCAGAAGAGGTAGAGCGGGAGTACTGGCGGCTAGTGCTCCGAGGCACCGAGCACGTGTGTGTGAACACGGCGTCCATCGACACGGGCGCCGACGGACACGGCTTCAGCAAGAACAAGGCCGACCCGTACGGCAAGCACCCCTGGAACCTCAAGGTGAGTACAGCACATTGA
Protein Sequence
MRFLACCNSSGGFKHRYSFFSKVQAQRKFALGAFVPPSAASNPPPERRPAPSEPPPTEQKNVYYSKMSADMLLDVISFQNLHKQPEPVVILKRLGKIQNPGPPAPAAPVKQEPLRQRVAPAATTKSANKMRLRSRPSFKTQVIKKRVSPPFLRKRKMPPQAVPDSSDLEDDRPLKYFARTTEVPRRQLRINAQAKKVKSKVERKPSKVIPAIKKIQNVNRRREATIKKRRLTVEAKNRKKLSVGHSATHYSSDEGLPLRSSSDNVPLLRSSSDNIPLRSSSDNMPLLRSSSDNIPLLRSSSDNIPPLRSSSDEEILSPEPSKKKYSPTKVDSKNKISVEGWLDDADKSTRLRKTNGFKMPLRPNRRRDTKEDDSKAVVKRKIGAKLLEKKLRAKKQTAAIVKGEEVPKKAASEPPPPSIEESVKDPVPKQTLTEASLWNHNGPKSHNIRHHTSVEGWLKNSVDASMGIVASPELPAAIDPVLRSRSVDSLCPSERFKSVRDIVDASECDLEAGCKQRLCQACCRVNKLRQLKNMVQRSTGRPDDVYEFNDDASVDSMRVYRRRPTAPPPLPASVPSPLPAPIPAPFPRTQDPVYLDILPNGSHIIQITNLNKRNTIISAKVIPKTKAEIRNEFSLIEHENLLDQLLTKLQGGEKLEDQESKNTPTQESRQEDINGQASTRTSRRKEPAKVFKLSTVNQSKPVQQIKLEEPSTSKKSIEPSPRSGRRSLPKKASELSVSSGEQAAPEAATPLAKTDEGNLLEAPVFYPTEAEFTDPIAYFEKISSAAAKYGLCKVVPPAGFRPSCSVPDEIRFNVSNQYIARLYRRWGPAAREMCAIRAYLADQSVMFARSPLYEGIEVNLPKLYHIVQRNGGLKNVIEKKRWGRVAEEMRYTRAPNAEKRLDQLYVKYLLPYDTLSAQERQEIMVAVDRCWNKKNQKMLERALNPLHRQKRLLGESDSSSDEAEEEGNLAWALAEAEDCVVQGRAMTLATFKKAEGEGNLAWALAEAEDCVVQGRAMTLATFKKVAANAMETLLPSTEQPSPEEVEREYWRLVLRGTEHVCVNTASIDTGADGHGFSKNKADPYGKHPWNLKVSTAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-