Agen001302.1
Basic Information
- Insect
- Agriphila geniculea
- Gene Symbol
- osa
- Assembly
- GCA_943789515.1
- Location
- CALSUL010000019.1:165879-177863[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-23 7.5e-20 72.9 0.0 13 89 1 74 1 74 0.95
Sequence Information
- Coding Sequence
- ATGGACGAGCGGCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTCTACCGCCTCTACCTGCTGGTGCGCGAGCGCGGCGGGTTCGTGGAGgtCACGAAAAACAAAACGTGGAAAGACATAGCGGGCCTGCTAGGCATCGGTGCGTCGTCTTCCGCCGCGTATACGCTTCGCAAGCACTACACAAAGAATCTGCTCGCGTACGAGTGCCACTTCGACCGCGGCGGGATCGACCCGCAGCCCATCATCAACCAGGTTGAAGCATCCACTAAGAAGAAGAGCGGCAAAGCGAATGCCAACAATACTGCAGGGTCATCAAATTCATCGGAGTCGTTCccggcgggcgcgggcggcggcgCGCCCATGGACGGCTACGGCGGCCAGTACGCCGGCTACCCGCCGCAGCCCAACCAGCAGCAAGGCGGCGGGCCCGGCGGGGACAACCTCGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCCAGGAGACCCCCAGGTTACCAACAAGGTTACGGGTACGAGTATGGATCTCCTTATCAGCCAAACAGGCCAGTTTACCCTCCCTATGGACCCGATGGCGACAGgATCAACCATGAACTTTTAGAAAGAAATCACAAAAACATAGATCAAGGATTTGAACGCGCCTCAGTACTAGTCCGTAGTACAGTGCGACTATAA
- Protein Sequence
- MDERRTPIAACPTISKQPLDLYRLYLLVRERGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKANANNTAGSSNSSESFPAGAGGGAPMDGYGGQYAGYPPQPNQQQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQPNRPVYPPYGPDGDRINHELLERNHKNIDQGFERASVLVRSTVRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -