Basic Information

Insect: Agriopis marginaria
Gene Symbol: B0310.2
Assembly: GCA_932301435.1
Location: CAKOAR010000041.1:1252588-1284415[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.1 66 4.6 0.7 1 23 402 424 402 424 0.86

2 11 0.0024 0.14 13.0 1.2 1 23 431 454 431 454 0.93

3 11 6.7 4e+02 2.1 0.3 1 23 458 480 458 480 0.84

4 11 0.0048 0.28 12.0 1.2 1 23 485 508 485 508 0.98

5 11 0.0016 0.097 13.5 0.6 1 23 512 535 512 535 0.97

6 11 3.3 2e+02 3.1 0.7 2 21 548 567 548 572 0.91

7 11 0.2 12 7.0 0.2 2 23 620 642 619 642 0.96

8 11 0.012 0.69 10.8 0.5 2 20 658 676 657 679 0.92

9 11 0.00012 0.0072 17.1 2.9 1 23 685 707 685 707 0.97

10 11 0.00083 0.049 14.4 2.9 1 23 714 736 714 736 0.98

11 11 3e-05 0.0018 19.0 2.0 1 23 742 765 742 765 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.1	66	4.6	0.7	1	23	402	424	402	424	0.86
2	11	0.0024	0.14	13.0	1.2	1	23	431	454	431	454	0.93
3	11	6.7	4e+02	2.1	0.3	1	23	458	480	458	480	0.84
4	11	0.0048	0.28	12.0	1.2	1	23	485	508	485	508	0.98
5	11	0.0016	0.097	13.5	0.6	1	23	512	535	512	535	0.97
6	11	3.3	2e+02	3.1	0.7	2	21	548	567	548	572	0.91
7	11	0.2	12	7.0	0.2	2	23	620	642	619	642	0.96
8	11	0.012	0.69	10.8	0.5	2	20	658	676	657	679	0.92
9	11	0.00012	0.0072	17.1	2.9	1	23	685	707	685	707	0.97
10	11	0.00083	0.049	14.4	2.9	1	23	714	736	714	736	0.98
11	11	3e-05	0.0018	19.0	2.0	1	23	742	765	742	765	0.95

Sequence Information

Coding Sequence: ATGCGGTGTAGCGTCCAAAATTGCTATAATGACACCAAGAACACCAACAAGGGTCATGGAATTACTTTCCACCTGATCCCAAAAGAGCCCATACTCCGAGCAGCTTGGCTCGAAGCCCTGATGATAACCAGCTGTGATACAAAGGAACGTAGAACCGTCTGCTCTGAGCACTTCAGGAATGAAGACTTCTATGAGACCAAGAATGGATTGAGGAAGGTCAGGAAGGAAGCTGTACCTGTCAGTGTATTGGATCCAAAAGAGGATTTAGAGGCGCCGGCCGCGTTGCGAGTTTGTCGGATATGCCTCGCGACAGGTGATGGAATGTTGGACATCAGAGATCGGAAGCTGGACCAACAGTATGAACAGATCACAGGCATTTTTTTCGGAGTAGAAGACAGACTCCCCCAGCGTCTTTGCTGGGAATGCGCGCATCGGCTGAAGTCCGCGGCTTCGTTCCGGAGCAAGGCGATACGAGCGCATGGCATACTGGCCGAGATGCTACATTCCACTTCTTATATAACAATAAAAGACATAAAGACAATAAACCGTATCCAACACAACCTTAGAACAAGTCTGATCAGTAAAAAACTCAACGAAAACAATGTCTACAACATACCCCATCGCGAAAACCAAATAATCAAATCGGAATCACATAACGGATATAACGATACCGAGTATAACGAAAACGGAAACACCGATAACGAATATGGAAATAACGGCGTTGAATATGGAAACAATGTTGATGATTACGTAGATAACCATAATGAATATGATAATGATAATGGATATAATGATAACGAAGTTAAAGTACTGGATAATATAACGGAAGTGAAAGACGAAAGTGCTAATGAGATATATTTTGATGAATATATAGATAATTTCGAATCTGACGATGATAAAAAATTGAGTGAGATATATCCAGATGTAGTGGAAAAGAAGGTGAAGATCAAAAAGAGAAAAGTTAGGGTGGAGAAAAAAGTAAGAGTGGTGAAGAAGAAGGAAGATGTGGACAGTGCTCAAGAAAAGAAGAATCTAGAGGATGACAATCTTAGCTTATTAGATAAATACAAAACTAACGAGATAAAGCGCCGTAAAAACGACGGCCCGGACGAGAATCTGTTCACAATATCTACTCTCACGTACGAGGAACAAATAGCGGAAATAGAGAAACGCCAAGAGGGCACCCTGTATAGGAACGCCCTGTATAAGTGTACCGTGTGCTACAGAGGGTTCCAGATCAAAGAGAGATACGACGCACACGTTGTAAGACATAGTGAGCAATGCGGCGCGTACGAGTGCTTCATCTGCAAGACACGTCTGAAGACGAGTCGAGCGCTGCGGAAGCACCTCACCGCTCAGCACACGGAGAAGTTCAGCTGCAAGGGCTGCCCCTTCCTCACCAGGAACAGGGGCGTCGCTAGGGAGCACGAGAAATGGCACTCGGGGACCAAGTACCAGTGTCCGCACTGCCCCAGTACCTTCGAAAAAATAACAACGTACATGGGCCACATACGGATCAAGCACGTGTCGGACTTCGTGTGTGAACTGTGCGGATTCACATTCGTCAGCCAGAAGGGCATCGAGGTGCATAAGAAGAAAAAACACAGGCTGCATGACAGAAATGTGGAACTAACCGGGCCTTACTGCGAGCTGTGCAAAGTGAAGTTCGTATCTGAAGAGGCACATTCGAGACACATGAAGTTGTCCGCCAGACACAGCAGCGATAGTGACCCTAACAGAATACGGAACGACTCTCAGAGCATGCGCGGCGAGCAAGCCGGCCGCGTGCGCCAGATGCACGACCGGAGGCCCTCCGTGCACCCGCGGGAAGCCGCCAGCGGAGGCCGAGGACCCGTCACCTGCGAGCAGTGCGGCGTCCAGCTGCGCGACTTGCGGCTGTACGCGCAACACTTCCGGCGCGCGCACCCGGACAAGAACCGAACCAAGTACCCCGCCATGAAGACCCCCTGCATGTGCGAGCAGTGCGGGAGAATCTTCCAGAGCATGGCCCTCCTGAAAGACCATATGTGGGTCCACACTGGAGAGAAACGGTTCAAATGCGCGCACTGTCCAAAGAGCTTCACTCAGAAGACGAACCTGGTGTTCCACGAGCGCGTCCACTCTGCCACTCGGCCGACGTACGAGTGCGGCCTGTGCGGGAAACACTTCGCGTTCTATAACAACAGGCGGCGACATATGTTTATCCACACAGGCCTGAAGCCGTACAAATGCGAAACATGCGGGAAATGTTTCACGACGGCGGGTGAGCAGCGCGCGCACATCGAACATGTGCATTTAAAGAAGCCCTGGCCGCGACGCGCGCGCAGACACGGCGGCCCCGGCCTCGGGGGCTCCGCGGAGGACTGA
Protein Sequence: MRCSVQNCYNDTKNTNKGHGITFHLIPKEPILRAAWLEALMITSCDTKERRTVCSEHFRNEDFYETKNGLRKVRKEAVPVSVLDPKEDLEAPAALRVCRICLATGDGMLDIRDRKLDQQYEQITGIFFGVEDRLPQRLCWECAHRLKSAASFRSKAIRAHGILAEMLHSTSYITIKDIKTINRIQHNLRTSLISKKLNENNVYNIPHRENQIIKSESHNGYNDTEYNENGNTDNEYGNNGVEYGNNVDDYVDNHNEYDNDNGYNDNEVKVLDNITEVKDESANEIYFDEYIDNFESDDDKKLSEIYPDVVEKKVKIKKRKVRVEKKVRVVKKKEDVDSAQEKKNLEDDNLSLLDKYKTNEIKRRKNDGPDENLFTISTLTYEEQIAEIEKRQEGTLYRNALYKCTVCYRGFQIKERYDAHVVRHSEQCGAYECFICKTRLKTSRALRKHLTAQHTEKFSCKGCPFLTRNRGVAREHEKWHSGTKYQCPHCPSTFEKITTYMGHIRIKHVSDFVCELCGFTFVSQKGIEVHKKKKHRLHDRNVELTGPYCELCKVKFVSEEAHSRHMKLSARHSSDSDPNRIRNDSQSMRGEQAGRVRQMHDRRPSVHPREAASGGRGPVTCEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCAHCPKSFTQKTNLVFHERVHSATRPTYECGLCGKHFAFYNNRRRHMFIHTGLKPYKCETCGKCFTTAGEQRAHIEHVHLKKPWPRRARRHGGPGLGGSAED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143130;
90% Identity: iTF_00033881;
80% Identity: iTF_00033881;