Amar005121.1
Basic Information
- Insect
- Agriopis marginaria
- Gene Symbol
- ZBTB41
- Assembly
- GCA_932301435.1
- Location
- CAKOAR010000041.1:576771-610693[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.052 3.1 8.8 0.6 1 23 430 453 430 453 0.97 2 18 0.17 9.9 7.2 1.2 1 23 487 509 487 509 0.97 3 18 0.26 16 6.6 0.1 2 23 543 565 542 565 0.91 4 18 0.26 16 6.6 0.1 2 23 592 614 591 614 0.91 5 18 0.26 16 6.6 0.1 2 23 641 663 640 663 0.91 6 18 0.26 16 6.6 0.1 2 23 690 712 689 712 0.91 7 18 0.13 7.9 7.5 0.0 2 23 725 747 724 747 0.95 8 18 0.0011 0.066 14.0 0.0 3 23 788 808 787 808 0.98 9 18 0.00087 0.051 14.4 0.7 1 23 814 836 814 836 0.97 10 18 5e-06 0.0003 21.4 1.2 2 23 842 863 841 863 0.96 11 18 0.029 1.7 9.6 0.3 1 23 869 892 869 893 0.94 12 18 0.044 2.6 9.0 2.5 1 23 1183 1206 1183 1206 0.92 13 18 0.0015 0.087 13.7 0.1 3 20 1268 1285 1266 1287 0.92 14 18 2.2 1.3e+02 3.7 0.1 5 23 1304 1323 1302 1323 0.93 15 18 4.3e-05 0.0025 18.5 0.6 3 23 1340 1360 1338 1360 0.96 16 18 0.0015 0.087 13.7 1.4 1 23 1366 1388 1366 1388 0.98 17 18 3.8e-06 0.00023 21.8 4.4 2 23 1394 1415 1393 1415 0.97 18 18 0.0019 0.11 13.3 0.1 1 23 1421 1444 1421 1444 0.96
Sequence Information
- Coding Sequence
- ATGAAAGAAAACGAAACTGTAGAGCATGTGCTGTGGCATTGTGAAGCCACAGAAGAAACTAGAATCGCTGCCGGGTTGCATGGGACACCGTTGCCTCTTTATCCGCGTCGCAACAACAGCTGGACTGCTTTCATCATCATTACTTACACTACCATCTACACCACTGGAGCAACTGTGCCAGCGCCCCAAATCCTCACTCCGGTATTTCAAGGAGTTGGGTTGGCTTGGATAAAAGACCCAATACATGCTCTTCACAGTCTGCTGCCGCTATCATCACTGGGTGTCTGGAAACCAAATCCGAAGACAATTGTTAACATCAACTTAGAAGAAACGGTTGCACAGCCGCGGTTTGAAGAAATAAGTGTCAATTCAACGTTGCCATTTATAAAAAGTTCATATATTACTGAAATAAAATTAGAATATGACCTAGCAAGTGGCAATGAGAGCATTGGTGATGATCTACAAAATGAAATCATTGATAATATTTTTAAAGACTGCAGTGATGATGAAAAAGAAATAGAAAATGGTCTCGAAACAGAATTATGTGTGACGGAAAAGATCAAACTTCAACAGAATAACTTAGAATGTGAACAGCTTTTAACTAATGACATTATCAACAGAAACGATAGTAAAAACGAAGAGGAACCAAAAGTTTCCAAAACAAGTGTAGCGAAATATAATAAAGAACAATCAAACAATTCCAAAAAAAATAAAGGAGCACGCAATAAAAAATATGAAGATTCTTTACATAATGAAATCATATCTAGAACAATTTCTAAAATCGAAGTGGCACCGAGAGATACCAGTAAATTGAAAGTGACTAAAGAACCAAAAGCTTCGAAAAGAAATAAAGAGACAAGTAATAAAAAAGAACCAATCGCTTCCAAAAAAAGTAAAGTTACGATTAATAGAAAAAGAACTTCAAAGAGGGCGGCAGTATTAGAAGACGACAGGTTGAAAGAGGAACTGGTCCTCAAGTTATCTTCATTCGGGGAGATAGTGACAGACGAGGGTACGACAGTAGACCGGGATCTGGTCACCAAGTTCCTGCGACATGACGCGGGCGCGCCGGTTGTAAGCAGGCTCCGGGAGGCTACGTGTCGAGAAGACGTATTAGACCTCTCACCCGACATTGAAGCAGCACTGACCACTATAGACAATGACTGGACCAGTGAAGACAAACCTGACTACAAGTCAATGTACGATATAGAGTATCTGTCCACCCTCGAGAAGAAGCTAGAGGAGTTCCAGAAGAGGAAGACGTATGAGCACTATGTGAAGGCGAAGCACAAGTGCGAGGTCTGCTACCAGCCGTTCCGGGGACCGATAGCACTGGACTCGCACAAGCAGACTTATCACGGTGAGAGCGCGGGCGGCCAGTTCTGTCCAATCTGCAAGATGCGGGTCTCTTTTAACTGTCGCAATCGGAACAGACACTCGGAGACACACTACGCCGTGTACAAGTGCAAACTGTGCCCCCTCGTCACATACTACAGAAAAACAATGAAGGAACATGCCGAGAAACACCGAGGCAAAACTTATCCGTGCGAGTCATGCAACGTGACTTACAATTGTACATCAAAGTACTACAGTCACATGGCTACGTACCACCGGCGCGGGCGCATCGTGTGTGCGACGTGCGGCCGGGGGTTCCCCTCAGAGAAGAGCCGACAAGTGCACGCCTCCATAACACATCGGGTGAGTGAAACAACTTACAGATGCATGTCTGCGCACTACAGTCACGTGGCTACGTACCACCGGCGCGGGCGCATCGTGTGTGCGACGTGCGGCCGGGGGTTCCCCTCAGAGAAGAGCCGACAAGTGCACGCCTCCATAACACATCGGGTGAGTGAAACAACTTACAGATGCATGTCTGCGCACTACAGTCACGTGGCTACGTACCACCGGCGCGGGCGCATCGTGTGTGCGACGTGCGGCCGGGGGTTCCCCTCAGAGAAGAGCCGACAAGTGCACGCCTCCATAACACATCGGGTGAGTGAAACAACTTACAGATGCATGTCTGCGCACTACAGTCACGTGGCTACGTACCACCGGCGCGGGCGCATCGTGTGTGCGACGTGCGGCCGGGGGTTCCCCTCAGAGAAGAGCCGACAAGTGCACGCCTCCATAACACATCAGGACGCACCCCCAAGTGTGGTGGGTACGGGGGTGCGATGCGAGGAGTGTGACGTCACGCTCCCCTCGCAGGGTGTATACGAGGCACACATACGTGACGTGCACGAGCCGCCGCCTGAATGCAACGCAGTCGGTGTAGGCTTCGGATGGTTACAGCTTCACTTCAAGAGAGAACATCCAAACGAAGATATGAACATTCTGTACGCGGACACGAAAACAAACCTCTGTGACATCTGCGGCGCTGGATTCACGAAGTACCCGGCGCTCCGGGACCATATGAACGTCCACACGGGCGCTCGGCCGTACGCCTGCGACCTGTGCCGCGCGCAGTTCCGCACGCGGTCTCTGCTGACCGTGCACCGCCTGAGACACTTCCCCTCCAGCATGCCCTGCCCGCACTGCGGGAAGAAGTTCAAGACCAGAGCCAACCTCTACTCCCATGTCAAGGGTCACACCGGAGAACGAAGCTACAACTGTGATATCTGTGGCAAAGGATTCCTCCTCAGTTTAACTCTAAACGAACACATACGAGGCGTCCACCACAACATACGTCGTGCCAGAAAAAGCGACACTCAGACAGAAGCGAGAGGGGGAAAGCTAAGAGGAGGGAGGAAGAAAGTCTTCGAGATTGAAGCAATCGAGAACAGTGAAGCCGACGAGACAGAAACAATAGACACCAGTAAACTTTTGGTCGCCAACACGTTCTACTGCATAGAATGCGAGTATCTTCTAACAAAATTCTATAAATTCAAACAGAAATGTTTGAGGGCATCGGAGATATATCGAGACTGGATGTCGGGAGAGATAATAGACCCAAAACACGACCTTCACAAACTGCTGCCTCCCTCATCCCTCGGTGTGTGGAAAGTTAACTCCAAGGTAGTTACCGAGTATAGTTTACCAGCAACGACACAGCCTGATGTGTGTAAAAAAAAAGAAGAAAAGAGCGTGGATTGTTATTCCACATTACAAGAATTGATAAATAATTCATACATTGGAGAAGTGAAACCAGGATGTGAACCAACATACAGCAATGACTGCAGCGATGACAATATACAAAATGAAAATGATTCTGGAAACATACAAGAAACGTTAACAACTACAAATTACAAAGTCGTAGAAAACGATAGAACTGTTCTACAAAATAAGAACAGTTCTAAAAAAAAACGAGAAACACCAACCTCTAAAAATTTCAAAGTCAGAAAAAACGATAATGTTCTCGCGGCTGCTCTAAAAAATAAAAACAAATCTAAAAAATTACAAAAAATATCAACCACTAAAAATGTTGAAGCCATAAATAAGGATGAAATGTACGTGTCAATGTTTGATATAGAGTATCTTCCAACCCACGAGATGAAGTTAGAGGAGTTCCAGAGAAGGAAGACATACGAGTGTTATGTGAAAGCTGAACACAAGTGTGAGATTTGCTACCAAGTGTTCAAGAGTGTGAATTATTTGAAGTATCATAAAGACAACTGGCATAATGAAAGTCCAGACCGCATCTGCTGTCCAATATGCAAGATATGGTACCCTAAAAGTAAACGCAAGAAGCACCTCCACAATGTGGTGTTCAAGTGCAAGCTGTGCCCTCTCGTCACATACTACAGGAGTAGGTCAGCGCATTACTTCCATAAAGGCATTGCTCACCGGCTACCAAGTATTATTTGTGAGCGCTGCGGTCGCGGGTTCAGCTCCCCTTCTGGTCTGACAGTACATAAGAGTAAATCGATTCAATGCGCAGTACTGAAGAAAACTACCGTACCCAAGAAAACAGAGTGCAACGAAGTCGGCCCTAATTTCGGCTGGTTAACGCGACACTTCAGGAGAGAGCATCCGAATGAAGATATGAACATATTGTACGCCGACAAGAAAAAACATCTCTGTGACGTCTGCGGCACTGGATTTAGTACACTGTACGCGCTCAGAGACCATATGAACAGCCACACGGGCGCTCGGCCCTACACCTGCGACATCTGCTCCAAGCAGTTCCCGTACAGTGTCGGGCTCCATGACCACCGCTTGAGACACTTCCCCGCCACCAAGTCCTGTACTCACTGCGACAGAAAATTCAAGACCAGGTCCAATCTCTACGCGCATATGAAGGTTCACACCGGGGAAAGAAGCTACCGTTGCAATATCTGTGGTAAAGGATTCCTACTCAGTACATCTCTTAACGAACACATAAAAGGCGTACATCTCCATATACGTCGCGCCAGAAAGCGTGACGCTGAGACAGATGAGGGAGCCAAAAACTTAAGTAAAAAGAGGAATAAAATCCTCAGGATTGAAGCAATCGAGACCAGTGAAGTACTTGAGACAGAAACAATAGACGCCAGTGAAATACTTGAGACAGAAACAATAGACGCCAGTGAAATACTCGATACAGAAACAATAGACACCAGTGAAGTGTTTGAGACAGAAACAATAGACGCCAGTAAAGTGTTTGAGGCAGAAACAATAGACAGCAACAGTAGTGAAATATTTGAGATAGAAACACTAGACAGCAGTGAAGAATTTGAGACAGAAACATTAGACCTATGA
- Protein Sequence
- MKENETVEHVLWHCEATEETRIAAGLHGTPLPLYPRRNNSWTAFIIITYTTIYTTGATVPAPQILTPVFQGVGLAWIKDPIHALHSLLPLSSLGVWKPNPKTIVNINLEETVAQPRFEEISVNSTLPFIKSSYITEIKLEYDLASGNESIGDDLQNEIIDNIFKDCSDDEKEIENGLETELCVTEKIKLQQNNLECEQLLTNDIINRNDSKNEEEPKVSKTSVAKYNKEQSNNSKKNKGARNKKYEDSLHNEIISRTISKIEVAPRDTSKLKVTKEPKASKRNKETSNKKEPIASKKSKVTINRKRTSKRAAVLEDDRLKEELVLKLSSFGEIVTDEGTTVDRDLVTKFLRHDAGAPVVSRLREATCREDVLDLSPDIEAALTTIDNDWTSEDKPDYKSMYDIEYLSTLEKKLEEFQKRKTYEHYVKAKHKCEVCYQPFRGPIALDSHKQTYHGESAGGQFCPICKMRVSFNCRNRNRHSETHYAVYKCKLCPLVTYYRKTMKEHAEKHRGKTYPCESCNVTYNCTSKYYSHMATYHRRGRIVCATCGRGFPSEKSRQVHASITHRVSETTYRCMSAHYSHVATYHRRGRIVCATCGRGFPSEKSRQVHASITHRVSETTYRCMSAHYSHVATYHRRGRIVCATCGRGFPSEKSRQVHASITHRVSETTYRCMSAHYSHVATYHRRGRIVCATCGRGFPSEKSRQVHASITHQDAPPSVVGTGVRCEECDVTLPSQGVYEAHIRDVHEPPPECNAVGVGFGWLQLHFKREHPNEDMNILYADTKTNLCDICGAGFTKYPALRDHMNVHTGARPYACDLCRAQFRTRSLLTVHRLRHFPSSMPCPHCGKKFKTRANLYSHVKGHTGERSYNCDICGKGFLLSLTLNEHIRGVHHNIRRARKSDTQTEARGGKLRGGRKKVFEIEAIENSEADETETIDTSKLLVANTFYCIECEYLLTKFYKFKQKCLRASEIYRDWMSGEIIDPKHDLHKLLPPSSLGVWKVNSKVVTEYSLPATTQPDVCKKKEEKSVDCYSTLQELINNSYIGEVKPGCEPTYSNDCSDDNIQNENDSGNIQETLTTTNYKVVENDRTVLQNKNSSKKKRETPTSKNFKVRKNDNVLAAALKNKNKSKKLQKISTTKNVEAINKDEMYVSMFDIEYLPTHEMKLEEFQRRKTYECYVKAEHKCEICYQVFKSVNYLKYHKDNWHNESPDRICCPICKIWYPKSKRKKHLHNVVFKCKLCPLVTYYRSRSAHYFHKGIAHRLPSIICERCGRGFSSPSGLTVHKSKSIQCAVLKKTTVPKKTECNEVGPNFGWLTRHFRREHPNEDMNILYADKKKHLCDVCGTGFSTLYALRDHMNSHTGARPYTCDICSKQFPYSVGLHDHRLRHFPATKSCTHCDRKFKTRSNLYAHMKVHTGERSYRCNICGKGFLLSTSLNEHIKGVHLHIRRARKRDAETDEGAKNLSKKRNKILRIEAIETSEVLETETIDASEILETETIDASEILDTETIDTSEVFETETIDASKVFEAETIDSNSSEIFEIETLDSSEEFETETLDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -