Basic Information

Insect: Agriopis marginaria
Gene Symbol: -
Assembly: GCA_932301435.1
Location: CAKOAR010000077.1:132743-139628[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.47 28 5.8 1.5 1 23 125 148 125 148 0.96

2 25 0.01 0.6 11.0 0.1 2 23 175 196 174 196 0.97

3 25 0.034 2 9.4 4.4 2 23 219 240 215 240 0.94

4 25 0.027 1.6 9.7 0.0 1 19 244 262 244 264 0.95

5 25 0.0012 0.071 13.9 1.4 1 23 273 296 273 296 0.93

6 25 0.022 1.3 9.9 1.4 2 23 305 327 304 327 0.91

7 25 5.4e-05 0.0032 18.2 0.6 1 23 333 356 333 356 0.97

8 25 0.00012 0.0073 17.1 1.3 1 23 363 385 363 385 0.98

9 25 1.4e-05 0.00083 20.0 1.9 1 23 391 413 391 413 0.99

10 25 0.0032 0.19 12.6 4.0 1 23 419 442 419 442 0.96

11 25 0.47 28 5.8 1.0 2 23 449 470 448 470 0.90

12 25 0.0046 0.27 12.1 0.6 1 23 476 498 476 498 0.97

13 25 0.99 59 4.8 0.2 1 23 508 531 508 531 0.91

14 25 2.2e-05 0.0013 19.4 3.4 1 23 537 559 537 559 0.97

15 25 0.002 0.12 13.2 1.0 1 23 564 586 564 586 0.97

16 25 0.00011 0.0064 17.2 0.7 2 23 593 614 592 614 0.97

17 25 0.08 4.7 8.2 3.4 1 23 619 642 619 642 0.94

18 25 0.0072 0.43 11.5 0.2 2 23 713 734 712 734 0.97

19 25 0.15 9 7.3 0.1 1 23 739 761 739 761 0.88

20 25 0.023 1.3 9.9 0.9 1 21 766 786 766 786 0.94

21 25 0.0087 0.52 11.2 0.1 3 23 795 816 793 816 0.93

22 25 0.096 5.7 7.9 4.5 1 23 823 846 823 846 0.95

23 25 0.00025 0.015 16.1 0.1 1 23 852 874 852 874 0.98

24 25 0.00039 0.023 15.5 1.4 1 23 880 902 880 902 0.99

25 25 8.6e-06 0.00051 20.7 0.2 1 23 908 931 908 931 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.47	28	5.8	1.5	1	23	125	148	125	148	0.96
2	25	0.01	0.6	11.0	0.1	2	23	175	196	174	196	0.97
3	25	0.034	2	9.4	4.4	2	23	219	240	215	240	0.94
4	25	0.027	1.6	9.7	0.0	1	19	244	262	244	264	0.95
5	25	0.0012	0.071	13.9	1.4	1	23	273	296	273	296	0.93
6	25	0.022	1.3	9.9	1.4	2	23	305	327	304	327	0.91
7	25	5.4e-05	0.0032	18.2	0.6	1	23	333	356	333	356	0.97
8	25	0.00012	0.0073	17.1	1.3	1	23	363	385	363	385	0.98
9	25	1.4e-05	0.00083	20.0	1.9	1	23	391	413	391	413	0.99
10	25	0.0032	0.19	12.6	4.0	1	23	419	442	419	442	0.96
11	25	0.47	28	5.8	1.0	2	23	449	470	448	470	0.90
12	25	0.0046	0.27	12.1	0.6	1	23	476	498	476	498	0.97
13	25	0.99	59	4.8	0.2	1	23	508	531	508	531	0.91
14	25	2.2e-05	0.0013	19.4	3.4	1	23	537	559	537	559	0.97
15	25	0.002	0.12	13.2	1.0	1	23	564	586	564	586	0.97
16	25	0.00011	0.0064	17.2	0.7	2	23	593	614	592	614	0.97
17	25	0.08	4.7	8.2	3.4	1	23	619	642	619	642	0.94
18	25	0.0072	0.43	11.5	0.2	2	23	713	734	712	734	0.97
19	25	0.15	9	7.3	0.1	1	23	739	761	739	761	0.88
20	25	0.023	1.3	9.9	0.9	1	21	766	786	766	786	0.94
21	25	0.0087	0.52	11.2	0.1	3	23	795	816	793	816	0.93
22	25	0.096	5.7	7.9	4.5	1	23	823	846	823	846	0.95
23	25	0.00025	0.015	16.1	0.1	1	23	852	874	852	874	0.98
24	25	0.00039	0.023	15.5	1.4	1	23	880	902	880	902	0.99
25	25	8.6e-06	0.00051	20.7	0.2	1	23	908	931	908	931	0.98

Sequence Information

Coding Sequence: ATGGGTTTCAAAAACATCAAACGTGAACCCGAGAACAGTTCGTGGGAAATAACAATAACAAAAATAAAACCAACGAAAACCGAAGGCAAATACAAGATAAAGAAAGAAAAGAAAGACGTGAAAACCAAAATGGCTGCGGCAAACTTCAAGAAGATTCACGATGTGGTCATCAAGAAAGTCAATAATAAAGACGAACCCAATCCTGAACCGATAGTGGTAGATTTGTTGAAGAAGCATAACATATATTGTAAAAAACCGCTAGAGCCCGTAGTAGATCAAGAAACTGAGTTAAACAAACATCGACATAATATTCGAACGATCATGAAGAATTCTAACGCTACTCCGTTCCGAGCTTATCACGTCGACGACGGCTTTGCCTGCTGCTTCTGTGACGACGTCTTCAAAATTGCCGCTAAGCTTAAAATTCACACCAATAAGCAACATATTATAGACAAAGACAATTTTAAAGAAAAATCTACTTCAATCTTCACGTATGTAGTAAAACTAGATGTAACAGAGCTAACCTGCAAAATCTGCAATGTAAATATTAAAACGCTTGAAGAATTGATAGTTCATTTGCAATCACACGAGATAGACCTCTACACAGATATCAAGAATCAAATCGTGTCTTTCAAATTCGATTGCAACGCCTTATGCTGTATGTATTGTAGCAAGGAGTTCACAAATTTCAAATTTCTACTCGAACATATGAACGAACATTACAAGAACTATGTCTGCGAAGATTGCGATGCTGGATTTATAAATTATAGGATGTTAGTAGCGCATGCAGATGGAGAAGATCTTACTGTTGGAGAATTCAAATGCCCTATATGCGATGAGGTCTTCGAAAAGTATACGAAATATAAACACCACGAGCTTCTAGCTCATACAGGCTTTAATCTGACATCTAACAAATGCGCACACTGCAAGGAACAATTCAAATCAGATGACAGCTTACGTGAACACGTGGAGGCGAAACACGAAGGACGACATGAATATAAATGTAGCGAATGTAAGAAAAGTTTCGAATCTAAGAATGTATTAATCGCACACGCTAAAAGAGTTCATTTACAAGAAGATAAGCATTACAGATGCGACGTGTGTGTTAGGACTTTCTACACGCGGCAGCGGTTGCAAAATCATATGTTGATACACTCCGATACGAGGCAGTACCAATGCGATATATGCGCATTGAAGTTTAAAAACAAAAAGACGTTGCAACGACACATTTACACGCACAAATTGAAAGGAAAGCATAAATGTTTGTTTTGCGAAGAATCCTTCATCCGTATGTCGTACTTAAATCACCATGTACGGCAAGATCATTTAAAAGATACCAGAACAACATGCTCCGCTTGTAACAAGCTGCTGTACCAATCTCAGTTGAAGAAACACATGGCGTTGAGGCACTCCGATTTGCGGACGTTCAAGTGTTCAGTTTGCGATTTAGAATGCGAGTCGAAACTTGCTTTAGTAAAGCATATGGGTTCACACTCCGATTTTAAACCTCACGAGAAGAAGTTTGAATGCCTCGCTTGCGGGAAAATGTTCCTCAAGGCGATTTATGTGACGAAACACGCGCAAAGAGTTCACCTGTTGGAAAAAAGATTTGTTTGTGACCACTGTGGGAAACAGTTTGCTGATTGCACTACCTTGAAGAATCATATGGCGCAGCATGGTGGACCTGAGTTCCCATGTTTCGGCTGCGCAAGGGTGTTCAAAACTAAGAAAACTATGTTAAACCATGCTCGGAACCACATGGAGGAGAAAAAAGTCAAGTGCGACATTTGTCAACATGCTTTTATATATCCTTATTTGTTGAGAGATCATATGAAACAACATGGGTTCGTGGGATACCAGTGCGCGTACTGCGAAGACGCCTTCCATAAACCTAGCAAACTAAAGAAACACACTCATGAAGAACATGACAACGTCAACGAAGCACGCTTCTTCGTTCTTAATCTCTTCGAGTACGTGTTCAAACTCGACGTGACCGGCTTAAAATGTAACTGCTGTAGAGAAGACGTCGACTCCCTTGAATCGCTGATAGACCATCTAAATATCAAACATAAAAAGAAAATCAATGATAATATAAAAGAAATAATACTTCCTTTCAAATTTGACACAGAAGATCTACAATGCGTAGTGTGTTTAAAAGATTTCCAAAACTTTGGAATGCTGCAAGAGCATATGATAACTCACTGCGATAAGAAATTTGTATGCGAAAAGTGCGGTGCAAGCTTTATGTGGGACAGCGCTCTAAAGGCTCATTTTATTGAACACGACGACGCCTCTTTCAAATGTAACTTGTGCAGCATGAAATTCACAACAGCACAGCTCCGGCAAAAGCACGCTCGTTGTTGCACACAAGAAAAGATCATTTGCGATTACTGTCCGGAGAGCTTCCCCAATGCGGTGAAGAAGACAACGCACATGACGAACGAACATGGAAGCGGGGGGAACAGTCACGCTTGCAATAGTTGCAACAGATACTTCCCTGATCAACATAGACTCAGTATGCATGTCCGACGGTTCCACATGATGGAGAAAAACTACATGTGCCAAGTTTGCGGTAGAAGTTTCTTCGCGGAAGGGGCTTTGCGGAGGCATGCTATAACGCATACGGGGCAGAAGGACTTTAGATGCGATTACTGTTTGAAGTTCCTGCAGACTCGTTTTAACTTGATTGTGCATATGCGGATACATACCAACGAAAGACCGTTCCGGTGTGAGGAATGTGGTTTAGGGTTCACGCAGAAAGCTGGCTTGCAGGGACATATGAAATCGAGACATGGAGTAATCATTTAA
Protein Sequence: MGFKNIKREPENSSWEITITKIKPTKTEGKYKIKKEKKDVKTKMAAANFKKIHDVVIKKVNNKDEPNPEPIVVDLLKKHNIYCKKPLEPVVDQETELNKHRHNIRTIMKNSNATPFRAYHVDDGFACCFCDDVFKIAAKLKIHTNKQHIIDKDNFKEKSTSIFTYVVKLDVTELTCKICNVNIKTLEELIVHLQSHEIDLYTDIKNQIVSFKFDCNALCCMYCSKEFTNFKFLLEHMNEHYKNYVCEDCDAGFINYRMLVAHADGEDLTVGEFKCPICDEVFEKYTKYKHHELLAHTGFNLTSNKCAHCKEQFKSDDSLREHVEAKHEGRHEYKCSECKKSFESKNVLIAHAKRVHLQEDKHYRCDVCVRTFYTRQRLQNHMLIHSDTRQYQCDICALKFKNKKTLQRHIYTHKLKGKHKCLFCEESFIRMSYLNHHVRQDHLKDTRTTCSACNKLLYQSQLKKHMALRHSDLRTFKCSVCDLECESKLALVKHMGSHSDFKPHEKKFECLACGKMFLKAIYVTKHAQRVHLLEKRFVCDHCGKQFADCTTLKNHMAQHGGPEFPCFGCARVFKTKKTMLNHARNHMEEKKVKCDICQHAFIYPYLLRDHMKQHGFVGYQCAYCEDAFHKPSKLKKHTHEEHDNVNEARFFVLNLFEYVFKLDVTGLKCNCCREDVDSLESLIDHLNIKHKKKINDNIKEIILPFKFDTEDLQCVVCLKDFQNFGMLQEHMITHCDKKFVCEKCGASFMWDSALKAHFIEHDDASFKCNLCSMKFTTAQLRQKHARCCTQEKIICDYCPESFPNAVKKTTHMTNEHGSGGNSHACNSCNRYFPDQHRLSMHVRRFHMMEKNYMCQVCGRSFFAEGALRRHAITHTGQKDFRCDYCLKFLQTRFNLIVHMRIHTNERPFRCEECGLGFTQKAGLQGHMKSRHGVII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -