Basic Information

Gene Symbol
-
Assembly
GCA_932301435.1
Location
CAKOAR010000319.1:59891-80437[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-14 2.9e-11 43.9 0.1 19 88 687 754 672 755 0.85

Sequence Information

Coding Sequence
ATGGGAAGAAACAGCAAATTGGCTGTACATGCGCAAAGAAAATATGCCCACAAGGCATATATTCCAGGGGCACCTCACAAAAGTGACGCTGAAATCCCAGAGCCAGAACAGACAATACCACCCCAACCTGTGGTGATGAGGGCTCGTAAGTCAGCAAAGGACTTATTAGACCAAGTATCCTTCCGGAATATTCATGAACATCCCGAAGAAAAAGATAGAATGTTAAACGTAAGAGTATTATTAAAACGGTATAACCCACTACAAAACGCTCCAGAACCTGCTCCCGTAATAACTAAAGAAAAACAAGCACCAAAGAAAAAAAAAGAACCAAGAAAAATAGAAGAACCAAGAAAAATTGAAGAACCAAGAAAAGTAGAAGTGCCAAGAAAAATTGTCAGTAAAAAAAGGAAATCATCAGCAGTAATAGCAAATTTATCGCAGATGAAATTAAGAACTCGTAGTAAGGCCAGGATTGTTGCAGTGAGCACAGTTACACAGAAACCGATAATTAATGATACAAGAGGCCGTAGATCTCAACGCACTCTAAGTGAAACAAGCACCGAAGACAATAGGCCCTTAAAGTATTTATCAAAAACAAGAAACAAAACAGATAAACGGACATCAAAACAAGTCCCACAAACCGACAGACCTAAATTGGTATTAAAATCAATTCGAAAATCATTAAGAAAAAAAGCGACCAAGATTGTAAAGAAACGAAAGGCTTTGAAGAAACGAACAATAAAAGAAAAAGGGCAGAATTCTGGAGCTAAAAATCAGACCGAAGGAAATGAAGTGCGGGCGTCCACCTCGGCTGCAGCACAGAATGCTGATCTAGATCCAAATGTGTTACCAGACAATGCGCCTACATTAAAGGCATTAGAACCTGAAGATGATTGTTCCCCAATGGAGCAGGATCATGTAGATCAAGAAAACGATTTCCAAATACCAGTAAATCCATTAGCAGATTTTGTCATCAGAATCTTTAATTGCGACAAAAGTGACGATATTGGCCAAGAGGAGATAAACGACATGTCGGACTCATTAGTTCGAGTCCGGGAGTGGGTTGCGACTAGCTATGAAGAAAATCAGCATTATCAAAAAGAGAACTCTCTGTTTAAAGTTCCAACAACGCCGCGATTGCGGGTGCGTGCACCGCCATCACTTTGTTCAACAATAAGATCGCCTGTGGCCGTAATGACTTCAAAAGAAAGAGCATTGAGGGCTCGATGCCCCACTTGGAACTATAAAACATTAAGTGACGTCGTAGTGATAAAAGAACTAGTAAAGCGCTTTTGTGGCGAGTGCACGAGGTGCCGCGTCATCTTCAAACTCGATCATAGGCCGTTAAGTCCAGTCTTAAGCAATGCATCGGACATCTATGAATTTACTTCGGGTATAGACGATGAGTCCTCCACTTTACCATACAGAGAAAAACCAATTTTCTCCAATATATCCACACAAGCAGATCATGTTTCAAAGCTGAAACAAATAATGACAGATAAAGGAAAAAAAATATTTAAAGCTGCTCTTATTATCAAGAACAAAATAGAAGAGAATGAGCTGCTATTGCCCAAAGAAGATGCAATTTTAGCCCAAGTCATAGGGATACTAAACGAGTGCAATGCGGCTCGAATTCCTGAAAGGCCGGTTCCATTGTCGCCTTTCACCGAAGAGGAGATATGCGCGCAACCGAGCCGGCGTCGTTGTATCGACGACCATTCCATCCCGACGACGTCCATTAAGCGCCCGCGGCAGCGTGCGACCCCTGCGCTGTCCATGGAAATTTCACTTCCTGCTCCTATGCGAAAATCTAAAAAATTCTCGCCTACCCTCGAGGAATTTACAGTGAGTCCAATTAAGTTCGCGCATAAAATGCAACTGAGGCATCCGGGCATTAGTCTTTGTGGAATTAAACCTCCACAAAACTTCAAGCCGCCATGCAATATGAGTGACCTAGAGCCAAACTTTAAAGTGACGAACCAGTACATTCATAGAATGCTAAAACGCTGGGGGACAGCAACTAGACAGTTGACGGCCATACGATCAATACAGGATCCAAAGACCCAACGGTCACCACTATTCGAAGGGCTGGAGGTTGACCTCGTGAAATTATTCCAAGCAGTACAGAGTGAAGATGGCATTGAAACGTGTCAAAACTACCCCGCAAAATGGCAAGTTGTGGCACAGAAAATGAAGCTGTGCTGCCGTGGAAAAGCCTACACAAAACTTGAAAACATTTACCTCAAATATTTGCTTGGGTATAACACATTAACACAAGAGGAACGCAAAAAGGCGGATGTGGAGGTGAATTTATGCTGGTTAAATCAAGACATCAATTCTGTGATGCGTGCGCAACAGCCGCTATGGAGGCAAGAACGCATGAGAAACGGCCTGCCTACAGACGAAGTCGCAGTCCCCTCGCATTTAGGAAAAGTTTGCGCTGAAGCCGAAGAGTGTGTCACGCCTGGTCGATATATGAATTATAGTAGCTTCAATAAGCTGGCGCTGCGAGTGCAAGGGACTTACTTCCCTGACAATGGAAACCCGAGCCCGGAGGAGGTGGAGCGGAAGTATTTAGATATAGTGATGTCGGCGAATGCGCATGTGTGCGTATACGCAGCGTCTGTGGATGCGGCGGAGCATGTGGCCGGGTTTCCTGTCAATCCAGCCGATAGCTACTCGAGCAACGCTTGGAACCTCAAGCTGCTGGGTTCCAGCTCGGACAACCTACTGAGCTACCTCGGCCCCAGGCTGGGCGTGTCGTCAACCTCCATTCATTACGGAATGATGTTTTCAACAAGCTGCTGGCACATGGACCCAACGTCCATACCTTGGATTGAATACCTTCACAGTGGAAGCCCCAAGATCTGGTACTCGATTTCGGCCGATCAAGAAAACAAGTTCCGCGCGGCTGCGGAAACGTTCTGTCCGTTTGCGGTTCAAAACAAGCCAATCTGGCTGCCGTGCGACATCATAATGATCCCACCGGACATGCTCCGGCAGTACGGTGTTATTGTGGAGAGGCACGTGCAATATCCCGGTGAATTCGTGATTGTCTACCCGAATACCTACTGTGCCTGCATCGACACCGGGCTATCCGTCTCGGAGGGCGTTTACTTCGCGCCTCATGACTGGATAAAAACCATCGAAAAAATATTCTTGAACCTGCAGACCAGTTGCGAGCCGAGCCTGTTCTCTATGGAGGAGCTGCTGATTGCGATGTCAACGAACGCGAACACGCCTTTCTCCCTGCTGCAACAAGTACACAAGGTGCTCGCCCCGCTGATGTACGGCGAGCTTTCCTTGCGTTCTAAAATGGCAAATCGGAACATTGAACTCATGTCACCGCAAGTGTTCCTGGATCAAAATCCGCGGGCCACCGATGGCTCGTGGCAAATTCAACCCACGGGCGAGTGCAGCTACTGCAGATGCACTTTGCATCTCTCAAGGGTGGTGGGAGTGACGGATGGACAGACGGGGGTTTGCGCAATGCACGGGCTCAGCTTGTTCGAGAGCGCAGTCTCACGTCGGGTACAACTTACGAACGTGTACTGCATCACGTTAGTAGATAATACAGAAATCTACAATATCATAAATAAACTCCGTGAGCGCGTGATCGTCAATGTAAAGGCGGCAATGTAA
Protein Sequence
MGRNSKLAVHAQRKYAHKAYIPGAPHKSDAEIPEPEQTIPPQPVVMRARKSAKDLLDQVSFRNIHEHPEEKDRMLNVRVLLKRYNPLQNAPEPAPVITKEKQAPKKKKEPRKIEEPRKIEEPRKVEVPRKIVSKKRKSSAVIANLSQMKLRTRSKARIVAVSTVTQKPIINDTRGRRSQRTLSETSTEDNRPLKYLSKTRNKTDKRTSKQVPQTDRPKLVLKSIRKSLRKKATKIVKKRKALKKRTIKEKGQNSGAKNQTEGNEVRASTSAAAQNADLDPNVLPDNAPTLKALEPEDDCSPMEQDHVDQENDFQIPVNPLADFVIRIFNCDKSDDIGQEEINDMSDSLVRVREWVATSYEENQHYQKENSLFKVPTTPRLRVRAPPSLCSTIRSPVAVMTSKERALRARCPTWNYKTLSDVVVIKELVKRFCGECTRCRVIFKLDHRPLSPVLSNASDIYEFTSGIDDESSTLPYREKPIFSNISTQADHVSKLKQIMTDKGKKIFKAALIIKNKIEENELLLPKEDAILAQVIGILNECNAARIPERPVPLSPFTEEEICAQPSRRRCIDDHSIPTTSIKRPRQRATPALSMEISLPAPMRKSKKFSPTLEEFTVSPIKFAHKMQLRHPGISLCGIKPPQNFKPPCNMSDLEPNFKVTNQYIHRMLKRWGTATRQLTAIRSIQDPKTQRSPLFEGLEVDLVKLFQAVQSEDGIETCQNYPAKWQVVAQKMKLCCRGKAYTKLENIYLKYLLGYNTLTQEERKKADVEVNLCWLNQDINSVMRAQQPLWRQERMRNGLPTDEVAVPSHLGKVCAEAEECVTPGRYMNYSSFNKLALRVQGTYFPDNGNPSPEEVERKYLDIVMSANAHVCVYAASVDAAEHVAGFPVNPADSYSSNAWNLKLLGSSSDNLLSYLGPRLGVSSTSIHYGMMFSTSCWHMDPTSIPWIEYLHSGSPKIWYSISADQENKFRAAAETFCPFAVQNKPIWLPCDIIMIPPDMLRQYGVIVERHVQYPGEFVIVYPNTYCACIDTGLSVSEGVYFAPHDWIKTIEKIFLNLQTSCEPSLFSMEELLIAMSTNANTPFSLLQQVHKVLAPLMYGELSLRSKMANRNIELMSPQVFLDQNPRATDGSWQIQPTGECSYCRCTLHLSRVVGVTDGQTGVCAMHGLSLFESAVSRRVQLTNVYCITLVDNTEIYNIINKLRERVIVNVKAAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-