Basic Information

Gene Symbol
osa
Assembly
GCA_932301435.1
Location
CAKOAR010000060.1:2586713-2616618[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-25 2.6e-22 79.4 0.0 2 89 255 339 254 339 0.94

Sequence Information

Coding Sequence
ATGCCGCCGCGAACGTCGTCGTCGTTGCCGGACGGCAGCGGCGGAGCGCCCCGGCCGGGCGCGCCGGGCACGCCGGGCGGGCAGCCGCCGCCGGGCCCGCCGGGCGGCGCCGGCCCGCCGCCGGGCGCCATGGGACCGCAGTACGGTCACCACCCGCCGTACAAGTCGCCGCACTACCCGCCGCAGCCGTACGTGTACCCTCCACGGAACCACCATCCCTACCCGTACGGCGGGTACCGTCCGCCGCCGCCGCATCCGCCGCAACACTACGCGCCGCCCATGAAGCAGCAGCAGCAGGGTCGGCACATGGGCCCGCCGGGCGCTCCGGGCGCGGGCGGGCCGGGCGGCGCCGGGCCGGGCGAGGGCGCCATGCCGCCGCCCACGGCGCCGGGCGAGGCGCACGACAACGGGCCGGCGGCACCCGCCACCGCGCTCGTCACCACCGGACCCGACGGCGCGCCGCTCGATGAGGGCAGCAGTCAACAGAGCACGCTCAGCAACGCCTCCGCAGCCAGCGGCGAGGAGACGTGCGCGTCGGGCTCCGGCAAGGGCTCCCGCAAGGAGTACGGCAGCGCGGCGCCGTCGCCCTCCCCCGGCGGTGCTTCGCATTCCTCGCCACACGACGACTATGACCCCGCGCCCAGCCCTTGGCCGCGCCCGCCCTCTAGTCCCGTATTTAACAGTCACATACCGCCGGAGTCCTTCAGATCCAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGAGGCGCGGCTGGGTGGAGCGGCTGCTGGCGTTCATGGAGGAGCGGCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTCTACCGGCTGTACCTGCTGGTCAGGGACCGCGGCGGGTTCGTCGAGGTGACCAAGAATAAAACGTGGAAGGATATCGCGGGTTTGCTCGGCATCGGCGCGTCGTCTTCGGCGGCGTACACGCTGCGCAAGCACTACACGAAGAACCTGCTAGCTTATGAATGCCACTTCGATAGGGGCGGGATCGACCCCCAGCCGATCATCAACCAGGTGGAAGCATCCACGAAAAAGAAGAGCGGCAAATCGAATAGTACGTCTACTGCAGCAGGGTCATCAAATTCTCAAGAATCATTCCCGGGCGGTGGCGCGGCTCCCGGCGCGCCCATGGACGGCTACCCGGCGCAGTACGCCGGCTACCCGCCACAGCCGAACCACTCGCAAGGCGGCGGGACAGGTGGGGACAACCTGGCCGCCTCCAACCCGTTCGACGAGCCGCCGGGCCCGCGCCGACCCCCAGGTTACCAGCCAGGTTACGGCTACGAATATGGATCTCCCTATCAACCGAATAGGCCAGTTTATTCCCAGTACGGACCCGAAGGCGATAGGGGGTACCGCGGCGGCGAGTACCAGTACGGCGGGTACGCGGGCGGGTACCGCGCAGGCGCGCCGGGCGCCGGCGGCACGCCCCCGCCCGCGCCCGCCTACCCCGAGTACTACCGGCCGCCGCACCCGCCGCACCCCGCGCACCCGCCGCACCCCGCGCAGCCCATACAGCAACACCAGCCGCCCATAGAGATGTCGGGCGCGCAGTCTCCGAGTGTAAGCCTAATGAGCTCGCAGCTGGCGCGGCAGCTGGTCGCGCCGCTGCCCACCAACCCGAGACCCTACTATGGAGGCGGCAAGCCGGCAGGCGGAGTAGCCGCGGTGGCCGGCAGCGGGCCGGGCCCCGGCGGCGCGCCGCGGCGGCACCCTGACTTTGCGAAGGGCGAGGGAGGGTACGGCGGCGCGAGCGCAGGCGCGGGGGCCGCCGCGCCGGGCGCGCGCTTCCCGCCCGCGTGGGGCGGACCCTTCCCGCGCCAGCAGCCGCCCTCGCCCGCCGCGCCCTGGCGTCCGCCGCCCACGCACCAGCCGCCCGGTCAGCCACCGTGGAATCACCAGCCATACCAGCCGCAGGGTGTGGGTGGTGGCAGCGCGGGCGTGCTGAAGCGTGAGCTCACGTTCCCGGCGGAGTGCGTGGAGGGTGCTGTGCCTGCGCCAGAGAAGCGGCGCCGACTGACACGCGCCGACGTGGCGCCCGTGGACGCCTGGCGCATCGTCATGGCGCTCAAGTCAGGCCTGCTGGCCGAGACCTGTTGGGCGCTCGACATACTCAACATACTACTCTTTGACGACAACTGCATAGGTTACTTCGGGCTCCAGCACCTGCCGGGTCTGCTGGACCTGCTGTTGGAGCACTTCCAGCGCGCGCTAGCGGACGTGTTCGATGCGCCGGCCGGCGAACCCGAGCCGTGGTACGCGACCAGCTCCGACCCCCCGCGCGCCGTGTCTCCCCCGCGGCGGCGCGCGCCCCCGCCCGAGCCCGCCGCGCGCTCCGTGCGCCTCCTGGCGGGCGAGAACTACACGATGCAGTCGCGTCGCCGGCACCCCGTCACACTGAAGCAGGACGAGGAGCCGCCCGCGCCGCCCGACCCCGACGACGTGGCCGAGCGCGACGACCGCGTGCTGGAGCCCTGGCAGGGCCCCGGCGACGGGCCCGCCGCCGAGCACGCGGTCACCTGCGTGCGAGCCGAGTACCCGCCCCTGCCCTTCGCGCGCGTGCTGCCCTCGCGGCGCGCGCCCGCCCCGCCCCCGCGCGCACCCTCCCCGCCGGCGCCCGCGCCCGAGCCGGCGCCCCCGGCGGCGGCTGCCTCGCCCGCGCCGCCCGACTCGGACAACCTGGCGCCGGAGCCGATGGATCTGGAACCGGAGCGGCGCGCGGCGCTGCAGGTGCGCGACCCGGCCGGCGTGCTGCGCCGGCGCCGGCTCGAGGACTACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTCAACCTGGTGTCGGAGACGCGCGCGGGGCTCGCGCGCCGCTGCGTCGCGCTCTCCAACATCCTGCGCGGACTCACCTTCGTGCCGGGGAACGAGGGCGAGTTCTCGCGGTCGGGCGCGTTCCTCGCGCTCGCCGGCAAGCTGCTGCTGCTGCACCACGAGCACGCGCCGCGCGCCGCCCGCGCACGTGCGTACGAGCGCGCGGCGCGCGACGAGGCGGACGCGCGCGCGTGCTGCTCGTCGCTGCGCGGCGCCGCCGAGTGGTGGTGGGAGACGCTGGCGGCGCTGCGCGAGGACGCACTGGTGGCGTGCGCCAACATCGCGGGCGGGCTCGAGCTGCACCACCAGCCGGAGGCGGTGGCGCGGCCGCTGCTGGACGGACTGCTGCACTGGGCCGTGTGCCCGGCGGCGGTGGCGGGCGACGCGCCGCCGGCCGCGCCCGCCGCCTCGCCGCTCTCGCCGCGCCGGCTCGCGCTCGAGGCGCTCTGCAAGCTGTGCGTGACGGACGCAAACGTGGACCTGGTGGTGGCGACGCCGCCGCGCGCGCGCATCGCGGCGCTGTGCGCGGGCCTGGCGCGCGACCTGTGCCGCCCGGAGCGGCCCGTGGTGCGTGAGTTCGCCGTCAACCTGCTGCACTACCTGGCGGGCGCGGGCGCGGGCGCCGCGCGCGAGGTGGCGCACCACGCGCCCGCGGTCGCCGCGCTCGTCGCATTCATCGAGCGCGCCGAGCACGCGGCGCTCGGCGTGGCCAACCAGCACGGCGTGGGTGCGCTGCGCGACAACCCGGACGCGATGGGCACCTCGCTGGACATGCTGCGGCGCGCCGCTGCCACGCTGCTGCGGCTGGCCGAGCGGCCCGAGAACCGGCCGCTGATCCGCCGACACGAGCGGCGGCTGCTCTCGCTCGTCATGTCGCAGATACTCGACCAGAAAGTGGCGCACGAGCTGGCCGACGTGCTCTACCACTGCACGCAGAGCGCGGACGCGCTGCCGGACCTCGACTGA
Protein Sequence
MPPRTSSSLPDGSGGAPRPGAPGTPGGQPPPGPPGGAGPPPGAMGPQYGHHPPYKSPHYPPQPYVYPPRNHHPYPYGGYRPPPPHPPQHYAPPMKQQQQGRHMGPPGAPGAGGPGGAGPGEGAMPPPTAPGEAHDNGPAAPATALVTTGPDGAPLDEGSSQQSTLSNASAASGEETCASGSGKGSRKEYGSAAPSPSPGGASHSSPHDDYDPAPSPWPRPPSSPVFNSHIPPESFRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTSTAAGSSNSQESFPGGGAAPGAPMDGYPAQYAGYPPQPNHSQGGGTGGDNLAASNPFDEPPGPRRPPGYQPGYGYEYGSPYQPNRPVYSQYGPEGDRGYRGGEYQYGGYAGGYRAGAPGAGGTPPPAPAYPEYYRPPHPPHPAHPPHPAQPIQQHQPPIEMSGAQSPSVSLMSSQLARQLVAPLPTNPRPYYGGGKPAGGVAAVAGSGPGPGGAPRRHPDFAKGEGGYGGASAGAGAAAPGARFPPAWGGPFPRQQPPSPAAPWRPPPTHQPPGQPPWNHQPYQPQGVGGGSAGVLKRELTFPAECVEGAVPAPEKRRRLTRADVAPVDAWRIVMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHLPGLLDLLLEHFQRALADVFDAPAGEPEPWYATSSDPPRAVSPPRRRAPPPEPAARSVRLLAGENYTMQSRRRHPVTLKQDEEPPAPPDPDDVAERDDRVLEPWQGPGDGPAAEHAVTCVRAEYPPLPFARVLPSRRAPAPPPRAPSPPAPAPEPAPPAAAASPAPPDSDNLAPEPMDLEPERRAALQVRDPAGVLRRRRLEDYEDECYTRDEPSLNLVSETRAGLARRCVALSNILRGLTFVPGNEGEFSRSGAFLALAGKLLLLHHEHAPRAARARAYERAARDEADARACCSSLRGAAEWWWETLAALREDALVACANIAGGLELHHQPEAVARPLLDGLLHWAVCPAAVAGDAPPAAPAASPLSPRRLALEALCKLCVTDANVDLVVATPPRARIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGAGAAREVAHHAPAVAALVAFIERAEHAALGVANQHGVGALRDNPDAMGTSLDMLRRAAATLLRLAERPENRPLIRRHERRLLSLVMSQILDQKVAHELADVLYHCTQSADALPDLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00142874;
80% Identity
-