Aleu017859.1
Basic Information
- Insect
- Agriopis leucophaearia
- Gene Symbol
- TY3B-I
- Assembly
- GCA_949125355.1
- Location
- OX421279.1:9854787-9868913[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.00079 0.058 14.5 0.4 5 23 1268 1287 1267 1287 0.94 2 7 6.5 4.8e+02 2.2 3.0 1 20 1293 1313 1293 1317 0.67 3 7 0.0011 0.082 14.0 0.6 1 23 1324 1346 1324 1346 0.96 4 7 0.012 0.84 10.9 0.1 1 23 1351 1373 1351 1373 0.98 5 7 7.8e-05 0.0057 17.7 1.1 1 23 1379 1401 1379 1401 0.98 6 7 0.29 21 6.4 0.7 8 23 1446 1461 1436 1461 0.81 7 7 0.0002 0.015 16.4 1.2 2 23 1470 1491 1469 1491 0.97
Sequence Information
- Coding Sequence
- ATGGCATCTAATGTGGCAAATATTGTGTTTCCTGGGCAGTTTAACCCGAAAACTGACAAATGGTGTGATTACAAAGAACTTATGTTGTGTGCACTCGACGCGGCGGGTTTTGCAGATTTCACGGTGAACAAGGCGCGATCTTTGTTCCTGTCGCAATGTGGAAAGGAGACTTTCGCACTCATTGCGTCGTTGCTGGTTCCTGCCCGCCCTACAGCAGTGCCGTTGTCGAGAATTATCGCAGTTTTGGATCAATTCTACGACCCGGAAATTAGCGAGATTTTGCAAGCGGGAAAGTTTCATAGACGCTCACAGTTGCAAGGTGAAAGCGTGCAAGACTTTGTGGGAGCTATAAGTACACTCGGTGCCAAGTGCAAATTCGGGGATTTGGAGCGTCAGTTGAGAGACCGGCTGGTGCTAGGGGTGCGGGATGAGCGTTTAAGGAGGGATTTGCTGAAGACGAAAGATTTAACCTATGAGCTGGCACTACAGATGTGTCTGAATTATCAAGCAATATTTCCCGACCTGTACCCAGAGGCCGTCGAGTCTAAGCAAACTCACTCGGGGGTCACCGAGCCTATGGAGATTAGCAAAATTAAATCGGTGGCTTGTAACCATTGTGGCCGGCAACATAAGGCTGATGAACGTTGCCGATTTGCAGgggcaaaatgttttttttgcaagaaGGCGGGGCATATAGCTGCTGCTTGCAAGAAGAAGGCTGCAAAAATACATCAAGTGGAAGATAATGAAGGGACTTGCTCAGACGATTTCAAACTGAGAGAAGCGGAAAATGGAATGATGGGGTTATATATGTGCGGGTTGGGAGATTATGTACCTCCAATATTATCCGAATTAACCATTAACGGAGCTAAATTGGCCATGGAAATAGATTCTGGAGCATCGAGGTCTATTGTATCGGAATCAACATATTTGAAACTGTGGTCGGTACCACCTCCGTTGACCGCGACCAATGTCAAGTTGGTAACTGTGACTCGAGAAGCATTAAAAGTTCTGGGATTATTACATGTACGTGTGATACTAGGTGAGAAAGAAGCACAATGTGAACTTCTGGTGGTGGCAGGGAATACTCCAAGTTTACTGGGAAGAAATTGGTTCAACGCTCTCAACATTTCGGTGGCTGGGCTGTGTTGGGCTCAAGACAGAGTGGCACCGCTGATGCAAGAGTTTCCAGATCTATTTAAAGAAGGGCTCGGGAAGTACAATGGGCCAGAGGTGTCACTACATGTTCGTGCAGATGCAGTACCAAGATATTTCAAAGCACGTCCGGTGCCATTTCCACAAAAGCAACAGGTCAATAAAGAGTTGCAACGGATGATTGAAGATGGAGTGTTGACTCCGGTCAAGTATTCAAAATGGGCTACACCGATAAGGGTGGTGAAAAAAGATGATGGGTCACTCCGGATTTGTGGTGATTATCGAGCTACTGTGAACGCTGCTATTGATGTGGACACATATCCACTCCCTACTTCAGTAGAAGCGTTTGTGAAGCTAAGCGGAGGGCGTGTTTTCAGTAAAGTAGACTTGAAACAAGCGTATACTCAACTGAAAGTTGACAAGGAGACGGCAGAGCTGCTAACACTCAATACTCCACTCGGATTGATGAGGATGAACCGTCTTGCCTTCGGTGTGAGTGCAGCTCCAGGAATATTTCAACGAGTTATGTCTGCAGCGCTCACAGATATGGATGGTGTAGCTTGCCTGTTAGACGATGTTGCCATTATGGGAAATAATATGGCGGAACATAATGAACGACTTCAGAAAGTACTGTTCAAATTGAATCAAATGGGGTTTACACTGAatgtaaagaaatgcatttttgcATCGGAGAGTATAACCTTCCTGGGTCATATGATAGATGCTGAAGGATTGCATCCATCCCCTGCAAAAGTCAAGGAGATAAAAGAGAAACCGGCTCCTACAAACAAGGAGACTTTACGTGCCTTTTTGGGCCTATACAACTTTTATGAAAAGTTTTTACCCGACAAAGCAACATGGTTGGAACCTTTGTACCGGTTACTCGAAGCAAAAAGGCAGTGGGTGTGGACAGAGAAGGAGCAAAAAGCATTTGAAATGGCCAAGAAATTAATATCGTCAGACCTAACATTGGTAGGATATGATTTGAATAGAGAACTGTTGCTGATTTGCGATTCATCGGAGTATGGTTTGGGGGCAATTATAGCTCATGTGATGGATGATGGGGTAGAACGACCAGTGATGATGGCATCCCGAACAATGCAACCCCATGAGAGACGTTATGGCCAGATTGACAAAGAAGCATTAGCCATTATGTTTGGGCTTAATAAGTTTCATGACTTCTTGTCGGGTCGGAAATTTGGTATCATCACAGATCACAAACCATTGGTGGGATTGTTTAATCCTGTGAAACTTATTCCAGACCAAATTTCCCCAAGGATGCTACGATGGTCATTAAAGTTGGGGTGTTACGACTATACGATAAAGTACAGGTCTGGGAAGTTGATAGGCAATGCAGATGCTCTAAGTAGGTGGACTGAACCTACGACACCAGGAACCTGTGAAGAGCCTTTAAAGGAAGTACTGTTGCTGGAGGATCGACCAAATGGATGGGAGATGGATGCTACTAAGATTGCAACAGAAACCAAAAAGGATCTAGTGCTACAGAAGGTTATGTTCCATGTTCTTCATGGGTGGCCACGACACAATTCTGATCCAAAGCTACAACAGTATTGGACTCGAAGGGAGGCCCTTTCACAGAGTAAGGATTGCTTATTGTGGTGCAACAGGGTCATCGTGCCAACATCCCTCCAACAGGAGGTGCTAGCACTGCTGCATGCCCCACATGCAGGGGTAGTCCAAACTAAAGCGTACGCTAGAGGATATGTATGGTGGGTGGATATGGACAAACAGATTGAAAGAATTGTAGCAGAATGTGAACAATGCCAGATGGTGAGGAACAACCCTCCGAAAGACCCGCAGATATGGATAGCAACCGAAAAGCCTTGGAGTCGGGTGCATGTGGATTTTGCTGGGCCGTTTCAAGGAAAGACTTTCTTGGTTGTGGTAGACAGCCATAGCAAGTGGCTAGAAGCTGAAATTGTGCCGTCTGTGAGTAGTGGAACGGTAATCACAATGCTAAGAAAGATATTCGCGTCTCAAGGCCTGCCAGAGGTGCTGGTTTCTGACAATGGCAGAGCATTTAGTTCAGCAGAATTTAATAATTTCCTCAAgaaaaacggaataaaacatttgtactCTCCCCCCTACCATCCCGCGACAAATGGCCAAGTGGAGAGAGCGATACAAACTTTTAAGAATAAACTGAAGAAGTTTGAAAGCTCACAGATGCCATGGAGTGAGAAGATGGCAAAGGTTCTATTTCACCTAAGGACAGTGCCTAATAGCGTCACCAATAAAAGTCCCGCAGAGATGCTAAATGGAAGAAAGTACAGAACAGCTATATCAAAGCTACATCCAGAGAACTTGCCAACACGGGCAGACACTCAATTAGAAGCAGGGGCACAAAAGCCACCGGCTAGGCATTTTCAGCTTGGGCAACCTGTTTTGATACACATGTATGGACCCGGCAGGAAATGGCAGAGAGGCACAGTGGAAGCTATAGAAGGCCCGAGCGCATACAGGGTGAGGACGGAAGGTGGAGAATTGCATCGCCGACACGCGGACCAAATGCTGGCGCGAGCTACACCCCAGGGAACATCTGCACCGATAGATCAAAGACGGTTATCTTGGGATCGACCAGACATAGAGATGGATCAAGCATCTCCAGAAAAGGTGTCAGAAGAGATATGCAATGCAACTTTCACAAGGAAAGACAATCTGATTGTTCATCTCCGTCATATGCACATAAGAAGGCAGTTTTACCAGTGTAAGCACTGCAATCGCTTTGGGACCAAGAATTTTACAAAGCTGATCAGACATTGGCATGCAATCCATGCAGAAGCACCTAATCGGTTTGACTGCCATTATTGTGGAAAGTCGACCATGTCTCGCGCAGCCATGGCCAAGCATCTAGAAATTCATGGAGACAAAAAATATGCTTGTGATGTGTGTGGGTACAGCACTTACACAATCGAGGTGATGCGGCGTCACATTCTGACGCACGTGGAGGACAAGCCGTACAAGTGCACCGTGTGCAACTCTTCGTACATCCAGCGCGCGCAACTCTTCCGCCACATGGAGAGCCACGGCGGCATCGCCTCCCACTGCGACGTCTGTGGTGACCTCTTCGACTGCAAGGCCAAATTGATGGTTCATAAGAGGAAACAACATGAAGGAATAGATAGTCGAATGTGTCCGTTCAAAGATTGCCTCCACGCAAAAGAGTTCAGCAGTGAAGAGTTGCTGGTTAAACATATGAACAAGCATATGCAGCTGAAGAGCAAAATGTGGTCGTGTGAGGTGTGCAAGAAGCAGTTCACGTCGGAGATGAACATGCGGCGGCACCTGAGCACGCACACGCTGGACCGGCCGCGGCGCTGCATGTACTGCGTGTCGGCGCGCGCGTACGTGCGGGGCCAGCAGCTCGTGCGCCACGTGCGCAAGTTCCACGGCGAAGTGTTCCGCACGCACCTGGCGCACGTGCGCAACGTTATCGTAACGAACCCGAAGAATGAGCGCGTGACCAAGTCGGAGCTGGAGTCCATTCTGAACCTGCTGGATGCGGAAGCGGAACGCATCCTGGAAGGGTACGGCGGAGCCGATGTGCTCTATGGAGGCATGCAGGCTGTGGCTGACCCAGAACCAGAGGAAGAAGATTCTCCCCTGATGTCTGAAGAAGTGCTGGCTGAGAACTTGGGCAATCTTCTGGAGCATTTAATTGATAAAGAAACCTTGCAGTGCCTTGGTTGGCCTGATGAGCCTGTTGACAATATCCTGGAGCGAGTGATCGTGCAGTGCGGTGCCACGCCGGCCGACCGCGAGATGTGGTCGCGAGTGCAGCGCCTGCGAGAGAACGCCAAGCATCTCTTCCTGTACGTGGTGGACGATAAGAACGTGGCGATGATGCTGGGCACACACACCATCGACCAGATTGTGAAGCACATTCTGAATCAGGTGGACGGTGACGCGGAGGGCGGAAACGCGGCGCCCGCGCACGCAGGCGAGTACGGCCAACCTACTGAGATCGAAATCGAACTCGCTGTCACATAG
- Protein Sequence
- MASNVANIVFPGQFNPKTDKWCDYKELMLCALDAAGFADFTVNKARSLFLSQCGKETFALIASLLVPARPTAVPLSRIIAVLDQFYDPEISEILQAGKFHRRSQLQGESVQDFVGAISTLGAKCKFGDLERQLRDRLVLGVRDERLRRDLLKTKDLTYELALQMCLNYQAIFPDLYPEAVESKQTHSGVTEPMEISKIKSVACNHCGRQHKADERCRFAGAKCFFCKKAGHIAAACKKKAAKIHQVEDNEGTCSDDFKLREAENGMMGLYMCGLGDYVPPILSELTINGAKLAMEIDSGASRSIVSESTYLKLWSVPPPLTATNVKLVTVTREALKVLGLLHVRVILGEKEAQCELLVVAGNTPSLLGRNWFNALNISVAGLCWAQDRVAPLMQEFPDLFKEGLGKYNGPEVSLHVRADAVPRYFKARPVPFPQKQQVNKELQRMIEDGVLTPVKYSKWATPIRVVKKDDGSLRICGDYRATVNAAIDVDTYPLPTSVEAFVKLSGGRVFSKVDLKQAYTQLKVDKETAELLTLNTPLGLMRMNRLAFGVSAAPGIFQRVMSAALTDMDGVACLLDDVAIMGNNMAEHNERLQKVLFKLNQMGFTLNVKKCIFASESITFLGHMIDAEGLHPSPAKVKEIKEKPAPTNKETLRAFLGLYNFYEKFLPDKATWLEPLYRLLEAKRQWVWTEKEQKAFEMAKKLISSDLTLVGYDLNRELLLICDSSEYGLGAIIAHVMDDGVERPVMMASRTMQPHERRYGQIDKEALAIMFGLNKFHDFLSGRKFGIITDHKPLVGLFNPVKLIPDQISPRMLRWSLKLGCYDYTIKYRSGKLIGNADALSRWTEPTTPGTCEEPLKEVLLLEDRPNGWEMDATKIATETKKDLVLQKVMFHVLHGWPRHNSDPKLQQYWTRREALSQSKDCLLWCNRVIVPTSLQQEVLALLHAPHAGVVQTKAYARGYVWWVDMDKQIERIVAECEQCQMVRNNPPKDPQIWIATEKPWSRVHVDFAGPFQGKTFLVVVDSHSKWLEAEIVPSVSSGTVITMLRKIFASQGLPEVLVSDNGRAFSSAEFNNFLKKNGIKHLYSPPYHPATNGQVERAIQTFKNKLKKFESSQMPWSEKMAKVLFHLRTVPNSVTNKSPAEMLNGRKYRTAISKLHPENLPTRADTQLEAGAQKPPARHFQLGQPVLIHMYGPGRKWQRGTVEAIEGPSAYRVRTEGGELHRRHADQMLARATPQGTSAPIDQRRLSWDRPDIEMDQASPEKVSEEICNATFTRKDNLIVHLRHMHIRRQFYQCKHCNRFGTKNFTKLIRHWHAIHAEAPNRFDCHYCGKSTMSRAAMAKHLEIHGDKKYACDVCGYSTYTIEVMRRHILTHVEDKPYKCTVCNSSYIQRAQLFRHMESHGGIASHCDVCGDLFDCKAKLMVHKRKQHEGIDSRMCPFKDCLHAKEFSSEELLVKHMNKHMQLKSKMWSCEVCKKQFTSEMNMRRHLSTHTLDRPRRCMYCVSARAYVRGQQLVRHVRKFHGEVFRTHLAHVRNVIVTNPKNERVTKSELESILNLLDAEAERILEGYGGADVLYGGMQAVADPEPEEEDSPLMSEEVLAENLGNLLEHLIDKETLQCLGWPDEPVDNILERVIVQCGATPADREMWSRVQRLRENAKHLFLYVVDDKNVAMMLGTHTIDQIVKHILNQVDGDAEGGNAAPAHAGEYGQPTEIEIELAVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -