Aleu025233.1
Basic Information
- Insect
- Agriopis leucophaearia
- Gene Symbol
- Zfy1
- Assembly
- GCA_949125355.1
- Location
- OX421290.1:1693732-1727925[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.17 12 7.2 3.4 1 23 299 322 299 322 0.97 2 16 1.7 1.3e+02 4.0 3.7 1 23 352 374 352 374 0.95 3 16 0.0013 0.098 13.8 2.1 1 23 379 402 379 402 0.95 4 16 0.0086 0.63 11.3 0.0 2 21 408 427 408 428 0.92 5 16 9.2 6.7e+02 1.7 0.0 2 21 450 469 449 472 0.82 6 16 1.1 79 4.6 1.6 1 23 513 536 513 536 0.96 7 16 8.6e-05 0.0063 17.6 0.5 3 23 553 573 551 573 0.95 8 16 5.9e-05 0.0043 18.1 0.9 1 23 579 601 579 601 0.98 9 16 2e-07 1.5e-05 25.8 0.9 2 23 607 628 606 628 0.97 10 16 0.0047 0.34 12.1 0.4 1 23 634 657 634 657 0.95 11 16 0.2 15 6.9 1.2 1 23 981 1003 981 1003 0.96 12 16 0.0069 0.51 11.6 0.2 2 23 1037 1059 1036 1059 0.94 13 16 2.2 1.6e+02 3.7 0.0 3 23 1073 1093 1073 1093 0.77 14 16 0.083 6.1 8.2 0.3 3 23 1155 1175 1153 1175 0.97 15 16 0.0028 0.2 12.8 0.9 2 23 1181 1202 1180 1202 0.96 16 16 1.4e-05 0.001 20.0 0.4 1 23 1208 1231 1208 1231 0.97
Sequence Information
- Coding Sequence
- ATGAATATCTGTTTAATCTGCTTGCGCACTGATAGACTGCTCAAACTTGCGAGTAACGTGCTAGAAGAATTTCACGATGAATTGTGCGAATTTTCTgtagtCACCATGGCTTCCTTTAGTTACTACTGCAGTGAATGCGAGTATCTTTTGACAAAATTTTACAAGTTCAGAATCAAATGTGTAAAGGCCCTGAAGATATATCAAAAGTGGATGTCAACAAAAGATTCTAAAAAGCAGCCGATAAATCTTCTGTACACTCTGCTGCCGCCATCATCCCTCGGTGCGTGGACTGCAAACTCTGAGAAAATCGGCGACTCTACCTTACATATGACGGATTCACAGACTGATATATGTTTTGAAGTTgAATTAATAAATGATACACTCCCTAAAGAAGTTAAATTAGAATATGACCAAACTGACAGCAGTGATAACATTGACATATGTCCCGATGTTCTTAAAATTGAGAATATATCTGAGAATGTTCCTAAATCGGAACACATTGATGAAATTAAAAATGATTGCGAAGCAGAAGACCATTTATTCGAAAATCTAGGAAAACAGCTGGAGAAAGATGTGGGGGAATGTACAGATTTAAGCATCATCAAACATGACACTGAAGCCAGCGAAAAAATAACAAAGGTCTTAAAGCCAAAAAAGCTTCCCAGGAAAAAACAGACTGAAAAAAAGGACGATGATGttacaaaaaacttattagAGCTTAAAAAGCGTCCTAAAAAACCAATGAGTGAAAAAAAGAAAGCATATTTTGATAGATTCAGAGAAGATGACAAACGGTACGAGTCAGTATTCGATATAGAATATCTTACAACCCAAGAGATGAGGCTAGAAGAGTTTCAGAAGAGAAATACATATGAGAATTATGTGAACGCTGAGCACAAGTGTGAAATATGCTACCAAGTGGTCAAgagtttgaaatttttgaagtaTCACACAAAAAAATGGCACAATGAAAGTACAGACAGTGTCCTCTGTCCTATATGCAAGACATGGAACTCAAAAAAAAGCAAACACAGGCGCACTCACTCCGTGGTGTTCAAGTGCAAGCTATGTCCTCTCATCACTTACCATAGAAAGACAATGCAGAATCACTTCGAGCAGCACAAAGGCAAGCAGTATCATTGTGAACAATGCAACATAACATACAAGAGTAAGTCAGCGTACAGCAACCACATGGGCAAGGTTCACCGACGAGGACGAAACGTTTGTGAGGGATGCGGCCGCGGGTTCCGCTCACCTCTAGGACTTAAAATACACAAGAACAACTCTGCGCGCTGCACCGGGGCGATGGAACCTAGTGCTGTGTCGAAGGAGACGATAGAGGGCGTGCGATGCGACGAATGTGACGTCACGCTGCCCTCCAAACAGGTGTTCGACGCGCATGTTGCTGACGTGCACGAGGTGAAGCACGAGGTGGTCACTCGGCCTCCCGCGACCAACAGCGCTGCGCTACCAGGAACCGAGCCCAGGGTATTAAGAAAGCCTCGCAAAAAATACATTCGACTCACGCCAGCAAAACATACTTGCAGAGTGTGTAACGAGTTCGGTACGAGTTTTGCTTGGTTACAACTACACTTCAAGAGAGAACATCCAAATGAAGATATTAACTTATTATACGCAGACAAGAAGACACATCTGTGCGATATCTGTGGCACTGGATTTAGTAATGTGTACGCGCTCCGCAGCCACATGAACCTCCACACGGGTGCTCGGCCCTTTTCCTGCGATATCTGCCCGAAGCGGTTCCGGAGCGCTTACCTGATGCGGGAGCACCGACTGAGGCACTTCCCCTCCACCGTGCCCTGTACTTACTGCGGGAAGAGCTTCAAGACTACGGGCAATCTCTACACGCATATGAAGACTCACACCGGTGAAAAAGAACACAAATGTGAAATCTGCGGGAAAGCTTTCCTATATCTCGTCAACATGAAGGAACACGTCCGAGGGGTGCATTACAACATACGGCGCCCCAAGAGGGGGGGCACTCGGCAGGGGGCCGCTGACACGGGGGCGGGAAAAGGAGCGAAAAGAAGAAAGGAAATGATTTCTGAGTTACCAGACACTTTCTACTGCAGTGAATGTGAATATCTGTTGACAAAATTCTATAAATTCAAACAGAGATGTGTGGAGGCAGCTAAGATATTTCAAGAGTGGACGTCGGCGGAAACtataAAAGAGCCAATAGATACTCTCCACGAGCGACTGTCGTCTTCCCTTGGGCCGTGGACCATAGAACAGGAGAGACCTAGCAACATGATCATCTATGAGGATTGCAAAACTCTTTGGAATGAAAAAGAAACATTAAATGAATGTGCAAAGAAAAAAGTTCAATTTGAAGATGGTGACCAGATTGACAACAATTATGACATCAAGAAGAAGACGAAAGAAGTTAAACTTGAGAATGGTGACCATATTGACAGCACCAGTAGCATTGAACTCAAAGAAGAAGTCCCACAATTCACTGAACCTTCTCTTGAACCAGAATACCTTGacgatgaaataaataaaaccaaagtGGTAGAGAACTTTGAACATGAAGAATATTTAGATTTTGATCTCATAAGCAAAACTGACGATTTTGAAGCTGAATCAAATAAATCACTAGGTGTAGTAATTAAGAAGGAAAAACCTTCCGAAGAAGTATTGCTTGTTAAAAAAACGCAGAAAAAAACTTCCATGAAAGTATTGTTTGATAAAGAAACCCAAAAAGAAACAGAAAGGTTGTCAGAAAATATAGTCAAGAAATTGTCGACATACGGTGACATCGTGGCAGACGATGgaactaaaataaacaaagaaatgaTTATAAAATGCATTAAGAACAAAGAGAGTGCGGGCGGGGATCTGTGCCCAATATGCAAGATGCGGTCAGGAGCCCACGTCCACAAAACTAACAAGCACTCTCAGATCCACCTAGCCGTATTCAAATGCAGGCTGTGCCCTCTCGTCACATACTACAGGGGGTCGATGAGAAAACATTATGACTTGCACGTGGGCAAGCAGTACAGTTGTGAGTCATGCAGAGTTAGTTACAAGTGTATGTCTGCGTACTACAGTCACATGTCTAAGTACCACCGGCGCGGGCGCATCGTGTGTCGGACGTGCGGCCGGGGGTTCCCGTCACTGACGAGTCTGCTCGTCCACACGTCACGGATGCACCGTGAAGTCCCTCCAAGTGAGGAGGGTACGGAGGTGTGGTGCGAGGAGTGTGACGTCACGTTCCCTCGCGCCGTATACGAGGCACACATACGCGACGTGCACGAGCGCTTGCTGCCGAATCTGAACACGTGGCCGGTGTCCCTGCAAGCACGCCGCGGAAACAATCATAAAGAACCAAGAGCAGCTCAGGACAAGCCGCGAAAATTGATGACGCATCAATGTCGAGTGAAAGTGTACGCGCTCCGTGACCACATGAACATCCATACTGGCGCCCGACCGTACGGGTGCGACCTGTGTCCCTCGCGCTTCCGCTCCGGCGCCCAGCTCTCCAACCACCGACTGAGACACCTCCCCGCCGCCATACCCTGCCTGCACTGCTCCAACAAGTTTAAGACTAAAGCCGGTCTCTACGCACATATGAAGGGTCACACTGGTGAACGCAGCTACAAGTGTAAAATATGTAACAAAGGATTCAAACTCAACGTTTCTCTCAACGAGCATATACGAGGCGTGCATTACAATATACGTCgcgaaagaaagaaaaacaccCAGACAGATGCCGGACGGAAAAACACCGCAAAGAAATTGAAAAGAACACAAATCGCCAAGATAGAACCAATCGAGACCAGTGAAGTCAACGAGACAGAAACAATAGAAACCAGTGAAGAATTTCAGACAGAAACAATAGAGACATATGGGGTTGATGAGACGGTAACAATAGAAAACTATGAGATAGAAAAAATAGAACCCAGTGAAGTGACTGTGGGGTTGCCGAAGCgaaaaagaaaattctttcagaCTTCTAATCCTAAAGAGAAAACTTTTCTTCGTTTAAGAAGTAGAATAATAGCCACGAAAGCAGATGATGTTTGTGATTTTAGTTCAGATGACTACAGCAATTGa
- Protein Sequence
- MNICLICLRTDRLLKLASNVLEEFHDELCEFSVVTMASFSYYCSECEYLLTKFYKFRIKCVKALKIYQKWMSTKDSKKQPINLLYTLLPPSSLGAWTANSEKIGDSTLHMTDSQTDICFEVELINDTLPKEVKLEYDQTDSSDNIDICPDVLKIENISENVPKSEHIDEIKNDCEAEDHLFENLGKQLEKDVGECTDLSIIKHDTEASEKITKVLKPKKLPRKKQTEKKDDDVTKNLLELKKRPKKPMSEKKKAYFDRFREDDKRYESVFDIEYLTTQEMRLEEFQKRNTYENYVNAEHKCEICYQVVKSLKFLKYHTKKWHNESTDSVLCPICKTWNSKKSKHRRTHSVVFKCKLCPLITYHRKTMQNHFEQHKGKQYHCEQCNITYKSKSAYSNHMGKVHRRGRNVCEGCGRGFRSPLGLKIHKNNSARCTGAMEPSAVSKETIEGVRCDECDVTLPSKQVFDAHVADVHEVKHEVVTRPPATNSAALPGTEPRVLRKPRKKYIRLTPAKHTCRVCNEFGTSFAWLQLHFKREHPNEDINLLYADKKTHLCDICGTGFSNVYALRSHMNLHTGARPFSCDICPKRFRSAYLMREHRLRHFPSTVPCTYCGKSFKTTGNLYTHMKTHTGEKEHKCEICGKAFLYLVNMKEHVRGVHYNIRRPKRGGTRQGAADTGAGKGAKRRKEMISELPDTFYCSECEYLLTKFYKFKQRCVEAAKIFQEWTSAETIKEPIDTLHERLSSSLGPWTIEQERPSNMIIYEDCKTLWNEKETLNECAKKKVQFEDGDQIDNNYDIKKKTKEVKLENGDHIDSTSSIELKEEVPQFTEPSLEPEYLDDEINKTKVVENFEHEEYLDFDLISKTDDFEAESNKSLGVVIKKEKPSEEVLLVKKTQKKTSMKVLFDKETQKETERLSENIVKKLSTYGDIVADDGTKINKEMIIKCIKNKESAGGDLCPICKMRSGAHVHKTNKHSQIHLAVFKCRLCPLVTYYRGSMRKHYDLHVGKQYSCESCRVSYKCMSAYYSHMSKYHRRGRIVCRTCGRGFPSLTSLLVHTSRMHREVPPSEEGTEVWCEECDVTFPRAVYEAHIRDVHERLLPNLNTWPVSLQARRGNNHKEPRAAQDKPRKLMTHQCRVKVYALRDHMNIHTGARPYGCDLCPSRFRSGAQLSNHRLRHLPAAIPCLHCSNKFKTKAGLYAHMKGHTGERSYKCKICNKGFKLNVSLNEHIRGVHYNIRRERKKNTQTDAGRKNTAKKLKRTQIAKIEPIETSEVNETETIETSEEFQTETIETYGVDETVTIENYEIEKIEPSEVTVGLPKRKRKFFQTSNPKEKTFLRLRSRIIATKADDVCDFSSDDYSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -