Basic Information

Insect: Agriopis leucophaearia
Gene Symbol: B0310.2
Assembly: GCA_949125355.1
Location: OX421290.1:1273028-1293695[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.1 82 4.6 0.7 1 23 403 425 403 425 0.86

2 11 0.0025 0.18 13.0 1.2 1 23 432 455 432 455 0.93

3 11 0.48 35 5.8 0.2 1 23 459 481 459 481 0.92

4 11 0.0049 0.36 12.0 1.2 1 23 486 509 486 509 0.98

5 11 0.0017 0.12 13.5 0.6 1 23 513 536 513 536 0.97

6 11 3.3 2.4e+02 3.1 0.7 2 21 549 568 549 573 0.91

7 11 0.2 15 7.0 0.2 2 23 622 644 621 644 0.96

8 11 0.012 0.87 10.8 0.5 2 20 660 678 659 681 0.92

9 11 0.00012 0.009 17.1 2.9 1 23 687 709 687 709 0.97

10 11 0.00084 0.061 14.4 2.9 1 23 716 738 716 738 0.98

11 11 1.2e-05 0.00086 20.3 0.6 1 23 744 767 744 767 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.1	82	4.6	0.7	1	23	403	425	403	425	0.86
2	11	0.0025	0.18	13.0	1.2	1	23	432	455	432	455	0.93
3	11	0.48	35	5.8	0.2	1	23	459	481	459	481	0.92
4	11	0.0049	0.36	12.0	1.2	1	23	486	509	486	509	0.98
5	11	0.0017	0.12	13.5	0.6	1	23	513	536	513	536	0.97
6	11	3.3	2.4e+02	3.1	0.7	2	21	549	568	549	573	0.91
7	11	0.2	15	7.0	0.2	2	23	622	644	621	644	0.96
8	11	0.012	0.87	10.8	0.5	2	20	660	678	659	681	0.92
9	11	0.00012	0.009	17.1	2.9	1	23	687	709	687	709	0.97
10	11	0.00084	0.061	14.4	2.9	1	23	716	738	716	738	0.98
11	11	1.2e-05	0.00086	20.3	0.6	1	23	744	767	744	767	0.95

Sequence Information

Coding Sequence: atgcgGTGTAGCGTCCAAAATTGCTACAACGACACCAAGAACACCAACAAGAGTCATGGAATAACTTTCCACCTGATCCCAAAAGAGCCCATTCTCCGAGCAGCTTGGCTGGAAGCCCTGGAGATAACCAGCTGTGAGGCAAAGGAACGCAGTACCGTCTGCTCAGAACACTTCAGGAATGAAGACTTCTACGAGACCAAGACGGGACTGAGGAAGGTCAGGAAGGAAGCTGTACCCGTATGTGTATTGGATCCAAAAGAAGATGTAGAGGCGCCGGCTGCGTTGCGCGTGTGTCGTATTTGCCTCGCGACGGGTGATGGAATGTTAGGCATCAGAGATCGTAAGCTGGACCAGCAGTACGAGCAAATCacaggcatttttTTCGGAGTAGAAGACCGTCTTCCCCAGCGTCTGTGCTGGGAATGTGCACATCGGCTGAAGTCCGCTGCATCATTCCGGAGTAAGGCAATACGAGCCCACGGCGTACTGGCAGAGATGCTACATTCCACTTCATATATAACAATAAAAGACATAAAGACAATAAACCGCATCCAGCATAATCTTAGATCAAGTCTGATCAGTAAAAAACTTAACGAAAACAATGTCTACAATGTACCACATCGAGATAACCAAATAATCAAATCGGAATCACATAACGGATATAATGGTAGTGAATATAACGAGTACGGAAATAACGATAATGAATATGGAAATAACGGCAACGAATATGTAAACAATGTTGATGATTATgcaaataatgataatgaatatGATAATGGATATAATGATAACGAAGTCAAAGTACTggataatataaatacaatggAAGTGAAAGATGAAAGCGCGAACGAGATATATTTTGATGAATATATGGATAATTTCGAATCGGATGATGACAAAAAATTAAGTGAGATTTATCCAGATATAGTAGAAAAGAAGGTGAAAATCAAGAAGAGAAAAGTTAGATTGGAGAAAAAAGTAAAAGTGGTAAAGAAGAAGGAAGAAGATGTGGACTGTGCTCAAGAAAAAAAGAATCTAGAGGATGACAATCTTAGCTTATTAgataaATACAAAACCAACGAAATAAAACGGCGTAAAAACGACGGCCCTGACGAGAATCTGTTCACGATCACCACTCTCACGTACGAGGAACAAATAGCGGAAATAGAGAAACGCCAAGAGGGCACCCTTTATAGAAACGCCCTGTATAAGTGCACAGTGTGCTACAGGGGGTTCCAGATCAAAGAGAGATACGACGCCCACGTTGTAAGACATAGCGAGcaaTGTGGCGCCTACGAATGCTTCATCTGCAAAACTCGACTCAAAACGAGTCGAGCTTTACGGAAGCACCTCACCGCTCAACACACGGAGAAGTTCAGCTGCAAGGGCTGTCCGTTCGTCACTAGAAACAGAGGCGTTGCTAGAGAGCATGAGAAATGGCACTCGGGGACCAAGTACCAGTGTCCGCACTGCCCCAGTACCTTCGAAAAAATAACAACCTATATGGGCCACATACGGATCAAGCATGTGTCCGACTTCGTGTGCGAACTGTGCGGGTTCACATTCGTCAGCCAGAAGGGCATCGAGGTgcataagaagaaaaaacacaGACTGCATGACAGAAATGTGGAACTAACCGGGCCTTACTGCGAACTGTGCAAAGTGAAGTTCGTGTCTGAAGAGGCACATTCGAGACACATGAAGCTATCCGCCAGACACAGCAGCGATAGTGACCCtAACAGAATACGAAACGACTCTCAGAGCATGCGAGGCGAGCAGGCGGGCCGGGTGCGGCAGATGCACGACCGGCGGCCCTCCATCCACCCGCGGGACGGCGCTGGCGGCGGCGGCCGCGGCCCCGTCACCTGCGAGCAGTGTGGTGTCCAGCTGCGCGATTTGCGACTGTATGCGCAGCACTTCAGACGCGCGCACCCCGACAAGAACCGGACCAAGTATCCCGCTATGAAGACACCCTGTATGTGCGAGCAGTGCGGCAGAATATTCCAGAGCATGGCCCTGCTGAAAGACCACATGTGGGTTCACACCGGAGAAAAGCGCTTCAAATGTGCGCATTGTCCGAAGAGTTTCACTCAGAAGACGAACCTGGTGTTCCATGAGCGCGTCCACTCCGCCACGCGGCCGACGTACGAATGCGGTTTGTGTGGAAAACATTTCGCGTTCTACAACAACAGGCGACGGCATATGTTCATCCACACCGGACTGAAGCCGTACAAATGTGAAACGTGCGGGAAGTCCTTCACGACGGCGGGCGAGCAACGTGCCCACATAGAACATGTACATTTAAAGAAGCCCTGGCCGCGACGAGCACGCAGGCACGGTGGGCCCTCCCTAGGGGGCTCCGCGGAAGACTGA
Protein Sequence: MRCSVQNCYNDTKNTNKSHGITFHLIPKEPILRAAWLEALEITSCEAKERSTVCSEHFRNEDFYETKTGLRKVRKEAVPVCVLDPKEDVEAPAALRVCRICLATGDGMLGIRDRKLDQQYEQITGIFFGVEDRLPQRLCWECAHRLKSAASFRSKAIRAHGVLAEMLHSTSYITIKDIKTINRIQHNLRSSLISKKLNENNVYNVPHRDNQIIKSESHNGYNGSEYNEYGNNDNEYGNNGNEYVNNVDDYANNDNEYDNGYNDNEVKVLDNINTMEVKDESANEIYFDEYMDNFESDDDKKLSEIYPDIVEKKVKIKKRKVRLEKKVKVVKKKEEDVDCAQEKKNLEDDNLSLLDKYKTNEIKRRKNDGPDENLFTITTLTYEEQIAEIEKRQEGTLYRNALYKCTVCYRGFQIKERYDAHVVRHSEQCGAYECFICKTRLKTSRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHSGTKYQCPHCPSTFEKITTYMGHIRIKHVSDFVCELCGFTFVSQKGIEVHKKKKHRLHDRNVELTGPYCELCKVKFVSEEAHSRHMKLSARHSSDSDPNRIRNDSQSMRGEQAGRVRQMHDRRPSIHPRDGAGGGGRGPVTCEQCGVQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCAHCPKSFTQKTNLVFHERVHSATRPTYECGLCGKHFAFYNNRRRHMFIHTGLKPYKCETCGKSFTTAGEQRAHIEHVHLKKPWPRRARRHGGPSLGGSAED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143130;
90% Identity: iTF_00033881;
80% Identity: iTF_00032984;