Basic Information

Insect: Agriopis leucophaearia
Gene Symbol: -
Assembly: GCA_949125355.1
Location: OX421269.1:2157177-2167798[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.8 1.3e+02 4.0 0.3 2 23 6 27 5 27 0.96

2 14 3.1 2.3e+02 3.2 0.0 1 23 1031 1054 1031 1054 0.92

3 14 2.5 1.8e+02 3.5 0.1 1 23 1135 1157 1135 1157 0.94

4 14 7e-05 0.0051 17.8 5.0 2 23 1160 1181 1159 1181 0.97

5 14 0.015 1.1 10.5 3.0 1 23 1187 1209 1187 1209 0.98

6 14 0.0074 0.54 11.5 3.4 2 23 1216 1237 1215 1238 0.95

7 14 6.4 4.7e+02 2.2 0.7 5 23 1251 1269 1250 1269 0.95

8 14 0.0086 0.63 11.3 2.4 3 23 1276 1297 1275 1297 0.97

9 14 0.024 1.8 9.8 0.1 2 23 1314 1334 1313 1334 0.96

10 14 6.2e-05 0.0045 18.0 0.7 1 20 1340 1359 1340 1362 0.92

11 14 0.0027 0.2 12.8 0.5 1 23 1370 1392 1370 1392 0.98

12 14 0.016 1.1 10.4 7.3 1 23 1398 1420 1398 1420 0.98

13 14 8.5e-06 0.00062 20.7 0.8 1 23 1426 1450 1426 1450 0.98

14 14 0.0012 0.087 14.0 5.1 1 23 1456 1478 1456 1479 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.8	1.3e+02	4.0	0.3	2	23	6	27	5	27	0.96
2	14	3.1	2.3e+02	3.2	0.0	1	23	1031	1054	1031	1054	0.92
3	14	2.5	1.8e+02	3.5	0.1	1	23	1135	1157	1135	1157	0.94
4	14	7e-05	0.0051	17.8	5.0	2	23	1160	1181	1159	1181	0.97
5	14	0.015	1.1	10.5	3.0	1	23	1187	1209	1187	1209	0.98
6	14	0.0074	0.54	11.5	3.4	2	23	1216	1237	1215	1238	0.95
7	14	6.4	4.7e+02	2.2	0.7	5	23	1251	1269	1250	1269	0.95
8	14	0.0086	0.63	11.3	2.4	3	23	1276	1297	1275	1297	0.97
9	14	0.024	1.8	9.8	0.1	2	23	1314	1334	1313	1334	0.96
10	14	6.2e-05	0.0045	18.0	0.7	1	20	1340	1359	1340	1362	0.92
11	14	0.0027	0.2	12.8	0.5	1	23	1370	1392	1370	1392	0.98
12	14	0.016	1.1	10.4	7.3	1	23	1398	1420	1398	1420	0.98
13	14	8.5e-06	0.00062	20.7	0.8	1	23	1426	1450	1426	1450	0.98
14	14	0.0012	0.087	14.0	5.1	1	23	1456	1478	1456	1479	0.95

Sequence Information

Coding Sequence: ATGGATCAGCTGGTGCAGTGCCCCGTGTGCACGCTGTTTCTCCACAATGGCATGTCTCTCGAGTCCCATCTGGACACGCACCCCAAAGACCAAGTCATAAAAGCGCTATGCAGTAtagcaaacaaaaacaacagctGTGGTAGCAGTAGAACGTCAACCCCAGCTAACTCTGAAAGATCTTACAGGAGTAGGTCTCAGACCCCCGCCGCCGAGGATAATGGACCCTGGAATGGTGCTCATAGAAATCCGGACCATGACCGCTACTGGACCAGAACACCAAGCGGGGCATCAAGCAGGCCACCAAGCACCGTTAGAACACCGAGTAGAACCCCGAGCCGGACCCTGAGCAGGACTCCAAAATCCACTTCATCAGCTAACATTTCCCGAAATTGCACGCCGGACATCAGGATGGTAGATAATATAACTTATGAAACCACGACGGTTAGCAGTTTATCTCAGCACTCGAACAACTCCCGCACAAATCTTGTCAATCCATCCCCTTCGTCCTTGAAAGCCGACAAAATGCAGCAAACATACCCACCAATATCAGACTATGAACAGAAGTACATGTTCTACCCAGAACAGCAAGAAGACAGGGAAATCAAATATTCTCGCAGTGCTGAGTACAATTCCATGGATCTTAATAATGAGTTTTCTAACAATGTGCCAATAGTGGGAGGTCCCGGTGTCAAGTTACAACCCAATGTGATGCCAAACGTGACGAGAAAAAGAAATGAGCCCGTGAAACTGATGCCGAAACCaagtaatttattgaatatagtCAAAAACAACGTCGGTGGTATGCAATACATGGCCCAAGGAGTGAAGCCTATGCACGTCATGGTAGGTCCCTCTGCACCCACTTTTGTTCAGAAGAATGTGCAAAACAGTATGATGGTGAGTGGTGCATTGCCAAGCTCCCAAGTCCACCGAGATGGCAAGGTCACTCCTTTAGTTCAAAATCACTTCAACCAGCTAAGTTCCAGTACATTCACTCCAGGGACTACGGTAGTTACTCAGAACTCCCAATATTTCTATCAGGAAATGGTGCAGAACATCCATGATCCAAAGAGTTTTATTCCCAGCATACCAGCAGTGTTTACAAGTCAAGAGAATGTCACAAATGTCGCTCAAACTAGCTCGATATACCAGAATGTGATGCTTGTGGATCAGTATGGCAACACTTCGTGCATGTACACTCCGCCACAACAGATGATACCCAAACAGACTGTCCCTCAACTGTTCACTGATGTGAGTGTGCTTCCATCTAATGCACAGAAACAAGGTCTTTCTATGGCTGATCCGAGCAAAACTTTGGTTATTGAAGTGGGTCCCATTGTTCCTACTGCAAGAGTCAGTTCCTGTAATAATACAGGTAATAACATGCTGTCACGGCCACCTCGACAAACTTCAGCAATTGTTTCTAATTTCACTCTACCAAAAGCTGAGGCTCCAAATATTACAATTACTGAAAAGTTCGACAGCCAGAGTGAAGCCCCAGGTATCATTAGGGGTCTTAAAATTCTAAGCAATATAAAGGTTGAAGTTCCAGTACAACATAACAAAAATATGATAAACACTGTGATGGACCTGACGGGGTCTAGTGATCGAGATTACCCGGTCAGGTCAGCGACGCCAGAGAAGATCTTGCCTGATATAGAAAACCATGAACAGAAGTCTTCCCACGATTTCTCGCAGCCCTCGACGAGTCGAGGTGAAAGTTCAAGAGATAGCTCTCTCTCCTTTGCAGAGCTGAAAAAGATTGCAAGTCCTACCTCAAACAAAGACTCTAGCAAAAATAatagtgtagataataaaatagatatgGAATTCAGCGACAGCTGTCCAGTGCCAGATCTAATATGTAACGAGAAGCCTTCCATATCACCGATCAGCGAGCTGTCGGAGAGTGGAGACAACTCCACCGATCGCACTGCGATGTCTCCAAAGCCTGAAAATAGTAAAATTAGTAATGAATTAGATagtaaagaaaagaaaatccAATCACCAATAAAGCCATTTAGGAGTACTCCACTAAGACTGAATAACATTTTCGTGAAGAAAAGTAAGAAAATTTTGcagataaaaagtttaaaacctATATCTGATAGTGGATCGAGCAGACAGGACAACGAGCCGATGCCATGCTCTTCCACAGGGCCAGTCAGCTTCACCAATCAAGTTCAAAAGACAGAAAATAAAAAGTCTATTTTGAAAACAATTTCAATAGAAGAAATCAAAGGAAAAGATGAAGTGGTGAGATTTGACACAAATCAAGTCGAGGACGCTGCTCAGTTCCCGAGTCCAGAAAAGTCTAATTCACCTCCGGAAGTTATTCACGTGAAAGAAGAATTTTCCTCAAGTAATGAGGGAACATTCAGCAACCAGGATCATCACGAAATGACTCCCTTAGATCCATTGCGGCCCTCTATCAATGTCGTTAGCTATGAGAACATGTCACCGAGAGACTTTGATGAGGAATCCAGCCACAGAGAACTTTTAGACTTGGAAGGTGCGAGTAAGACCAAACAGTTTGTCAATATGATAAACGAAAACTACTTTGGGGATAACATTTACGAGCACTATTTTACGCCGGATCGGGTAGAAGCTTTCGACGATAAAGGACCGACGGTGTTCAAAGACAATGCAAAAGAAGCATTTTCATGTAACATTTGGGGGGAGCCATCTACGAAAGAGAACGAGTTTGTGTTGCCCAATTTTATCCATGAAAGCTATAAGATTGCAGAGAGTGGAATGGATTATACAGAGGGGGAAAGAGACGAAGCACGTAGGGATGAGGAGAGGGAGCGGGATAGCAAGGCGGATTTGTTAAGCGAGAGTCGCAGTGATGGAGAGCCAACGTTAAACATTTGTGCTGACGAGCGCATGCCACCGCGCGGCGAGCTCAGCGGCCAGGAGAGCAACGGTGATATGGACTCCTCCTGGAATGGGGTGTATTCGGAAGCGACGCCGGCTGAGCCGTACGACCTGATGGCGCGCGAGAGTTGGGTCTCCGACGGATCTGAACTCGACGTCACCGACAAACGGGATAACTTAGAGGAGATGGCAGTGTTCCCGCCTGCGCGTCACTACGCGTGCGGCTCCTGTGCCGCTACGTACCCTTCGATGAAGGAGCTGCGAGCGCATGGGAATCTGGCGCATGCGCCGTCCGCGCTTCCCTGCTCCTCCTACACACGGCTAACGACCGCCAACATCAAGAAAGAAGAGAAGATCGATGACAGCGGTCTGTCTTGTGCCACAACCCTGATGAGTCTGGACTCCAAAGCTACCATCACGTCCACTATACTGCAAGTGTATGACACACTGGAGGAAAGCAAGCCTCGGCTGGACCTGCGAAGGCTGCTCAAGCAGGAGAAGCGCAAGCGCAGGTCGCGCAGGGACTTCGTCTGTCCCACTTGTAAAGTGGACCAGGTGACGGACGCTGCATTCAACTTGCACTTACGAACGCACCCGCTGGAGTGTCTCAAGTGCGGCAAGTGTTTCCACCGGCGCGCCAACCTCAACCTGCATCTGAAGACGCACCTCGGCATCAAGAATTACAAATGCGAGATCTGCGAGAAACGGTTCCTGACCCGGCAGAAGTTATCGGAGCACCACAACATTCACACCGGCCGGGCGCCTGTCAAGTGTACCCTTTGTGACGATACCTTCCGACGGTACTCCAATATGGTGCAACACAGGAACCGTCACCACTACCACAAGCGCGCCGCGGTCCGCGACTACGTGTGCCAGTGCGGGCTGGTGCTCCACTCGCGCGCCAAGCTCGCCTGGCACCGCGAGACGCACGACCCGCGTCCGAAGGCCTGCATGCACTGTCCCGACAAGTTCGTGCACGCCGCCTCGCTCACCCGGCACATCCGCCGCAAGCACAACACCCTGTACATGACGGCGCCGTCTGTGTCGCGAGCTGAGAACGTACCCTGTCCCATTTGTAAACAGATCTACCTCCGCACGAACCTGCGCGCGCACCTCCTCACCCACAGCGGCAAGCGACCCTACTCCTGCGTCATATGCAACAAAGCCTTCACCACCAAATGGAACCTGAAACTCCACCGCTGGACCCACGTGTCCCGCTCCGCCAAACCGTTCAAATGTGCGCTCTGCAAAGGAGCTTTCATACGACGAACCGAGTACATCTCCCACATGAACTCTCACAAGTCCGTCCGTCCGTACACGTGCAACTACTGCGGCTGTCAGTTTATAAGGAAATACAACTGTCAACGTCACGTGAAGGAACACGAAACGGCGAAGAAGTACGTCTGTGAAGTAGCAGAGTGCGGTAAGTCGTTCCATAGGAGCTATTACTTGTCGGAGCATATGAAGGTGCACAGTGGAGCGCGCCCGTTCTCTTGTAATATTTGCGGGAAAACTTCAAGCAATAAGTCTAATCACAATAAACATGTAAAGATACACCACGCGAGAGAACCGGTCGCTACTGAAGCGTAG
Protein Sequence: MDQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSIANKNNSCGSSRTSTPANSERSYRSRSQTPAAEDNGPWNGAHRNPDHDRYWTRTPSGASSRPPSTVRTPSRTPSRTLSRTPKSTSSANISRNCTPDIRMVDNITYETTTVSSLSQHSNNSRTNLVNPSPSSLKADKMQQTYPPISDYEQKYMFYPEQQEDREIKYSRSAEYNSMDLNNEFSNNVPIVGGPGVKLQPNVMPNVTRKRNEPVKLMPKPSNLLNIVKNNVGGMQYMAQGVKPMHVMVGPSAPTFVQKNVQNSMMVSGALPSSQVHRDGKVTPLVQNHFNQLSSSTFTPGTTVVTQNSQYFYQEMVQNIHDPKSFIPSIPAVFTSQENVTNVAQTSSIYQNVMLVDQYGNTSCMYTPPQQMIPKQTVPQLFTDVSVLPSNAQKQGLSMADPSKTLVIEVGPIVPTARVSSCNNTGNNMLSRPPRQTSAIVSNFTLPKAEAPNITITEKFDSQSEAPGIIRGLKILSNIKVEVPVQHNKNMINTVMDLTGSSDRDYPVRSATPEKILPDIENHEQKSSHDFSQPSTSRGESSRDSSLSFAELKKIASPTSNKDSSKNNSVDNKIDMEFSDSCPVPDLICNEKPSISPISELSESGDNSTDRTAMSPKPENSKISNELDSKEKKIQSPIKPFRSTPLRLNNIFVKKSKKILQIKSLKPISDSGSSRQDNEPMPCSSTGPVSFTNQVQKTENKKSILKTISIEEIKGKDEVVRFDTNQVEDAAQFPSPEKSNSPPEVIHVKEEFSSSNEGTFSNQDHHEMTPLDPLRPSINVVSYENMSPRDFDEESSHRELLDLEGASKTKQFVNMINENYFGDNIYEHYFTPDRVEAFDDKGPTVFKDNAKEAFSCNIWGEPSTKENEFVLPNFIHESYKIAESGMDYTEGERDEARRDEERERDSKADLLSESRSDGEPTLNICADERMPPRGELSGQESNGDMDSSWNGVYSEATPAEPYDLMARESWVSDGSELDVTDKRDNLEEMAVFPPARHYACGSCAATYPSMKELRAHGNLAHAPSALPCSSYTRLTTANIKKEEKIDDSGLSCATTLMSLDSKATITSTILQVYDTLEESKPRLDLRRLLKQEKRKRRSRRDFVCPTCKVDQVTDAAFNLHLRTHPLECLKCGKCFHRRANLNLHLKTHLGIKNYKCEICEKRFLTRQKLSEHHNIHTGRAPVKCTLCDDTFRRYSNMVQHRNRHHYHKRAAVRDYVCQCGLVLHSRAKLAWHRETHDPRPKACMHCPDKFVHAASLTRHIRRKHNTLYMTAPSVSRAENVPCPICKQIYLRTNLRAHLLTHSGKRPYSCVICNKAFTTKWNLKLHRWTHVSRSAKPFKCALCKGAFIRRTEYISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVKEHETAKKYVCEVAECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143318;
90% Identity: iTF_00034109;
80% Identity: -