Basic Information

Insect: Agriopis leucophaearia
Gene Symbol: pita
Assembly: GCA_949125355.1
Location: OX421264.1:10548319-10573421[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 6.5 4.8e+02 2.2 0.4 2 23 198 220 197 220 0.88

2 10 0.00064 0.047 14.8 0.2 3 23 227 247 226 247 0.97

3 10 0.00029 0.021 15.9 0.9 1 23 253 276 253 276 0.96

4 10 0.22 16 6.8 0.0 2 23 283 304 282 304 0.96

5 10 4.1e-06 0.0003 21.7 0.8 1 23 312 335 312 335 0.96

6 10 0.00023 0.017 16.2 0.4 1 23 341 363 341 363 0.98

7 10 2.2e-05 0.0016 19.4 9.2 1 23 369 392 369 392 0.98

8 10 9.8e-05 0.0072 17.4 0.3 1 23 408 430 408 430 0.93

9 10 0.0046 0.34 12.1 0.0 2 23 436 457 435 457 0.96

10 10 0.0005 0.037 15.1 0.2 1 23 463 486 463 486 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	6.5	4.8e+02	2.2	0.4	2	23	198	220	197	220	0.88
2	10	0.00064	0.047	14.8	0.2	3	23	227	247	226	247	0.97
3	10	0.00029	0.021	15.9	0.9	1	23	253	276	253	276	0.96
4	10	0.22	16	6.8	0.0	2	23	283	304	282	304	0.96
5	10	4.1e-06	0.0003	21.7	0.8	1	23	312	335	312	335	0.96
6	10	0.00023	0.017	16.2	0.4	1	23	341	363	341	363	0.98
7	10	2.2e-05	0.0016	19.4	9.2	1	23	369	392	369	392	0.98
8	10	9.8e-05	0.0072	17.4	0.3	1	23	408	430	408	430	0.93
9	10	0.0046	0.34	12.1	0.0	2	23	436	457	435	457	0.96
10	10	0.0005	0.037	15.1	0.2	1	23	463	486	463	486	0.96

Sequence Information

Coding Sequence: ATGGAGAAAAGAAAAGAGACTTTAAGTTCTCTAAAACTGTGTCGGTTTTGTCTCACAGCAGAAGAATCGCTCATTTCGTTGTACGACAACAAGAACCGAGCGCCAAAAAATTCAGTACCATTTGCATTGAAAATTCTAGCATGTATCGCAATAGAGATTTTTCCTTCGGACAATATGCCACAATTTATCTGCCAGCGCTGCAAATTATTCATGGAACTTAGCTATGCATTCAAGCAACTTTGTAGACAGGCCGATGAAGCTATTCTACAGTTTATTCAAAATGGAACACCATTGGCAGCGATGCCATGGCCCTCTCAACTTAATAAAGTGTACAAATCTGTGAACAAATCTGCCGAAGTTAACGTAGTTAAGACCGTTGTGCAAGGAGGTGCTACCGTCAAAGTAATGGCGGAGGAGGTCTCCGACAGTGAAGGAGATGAAGATAATGTTTATAATGTTAAGATAGGGGATGGTTCAGAAGAAGGCAAGAGCCTCAAAATCATCACAAGCGTTGATCAATCAAGATCCAAGAGTCGTCAAGATAGTGAAGAGGCCGATAATAGTGAAGTGAGCGTGGTGTCGGGATGCTGGCCGTGCGTCGACTGCGAGTGCACGTACCCGCTGGAACAGCTGCTGACGCTCCACAAAGCGCAGAAGCACCGCGCCCGGAACGAGATTTGCGACGAATGTGGCGGGAGATTCTTCTCGAAAAACGATCTCGAAGTTCACCAGTTGACGCACTCACCTGAAATGCCGTTCCAATGTGTCGCGTGCGACAAGAAGTTCAAACGGCTTATCCTACTGAAACGCCATGAAAAGgtaatGCATTCGGAACTGCCTCAGCTAAACTGTCCGAGCTGCCCGGCAACATTCCTCTCCATCGAGGAGCTGGAGGCGCATCAGTTAAAGCATGAGCGACACCCCTTCCGACCTTTCACTTGCTTCATTTGCGATAAAAGCTTCCCTACCAAGACTTTGCTACAAAAGCACACTGCAATGGTTCACAACAAGAAGTCTGCTTTCAGCTGCCAATACTGCCCAGAGCAGTTCCCGTCAGTAGCTAAGCTGACGCGCCACGTAAGACAACACGCGGGCGTGAAGCCGTACCCGTGTAAGCATTGCGACAAGAGCTTCACAAAGTCGCATCATTATACCAGACACCTTCGCGTAAAGCACGCGGAGACTACCCGCATCCCGGGCCCATACAACGAATTTGATGCGTATCGCTGCGACGAATGCGAAGAAACATTTACGACTCAGGACGAGCTCATGTACCACTCGGCTCTGCACGCTACTAGGAACCTCATCTGCCCATTGTGCCAGGAGAAGTTCGATGACGTCGACACTGTCACTGCTCATATCAAGTCTCATACCAATGGTACGGAATTTATGTGCGATTTCTGCGAGCTAATATTCACGTCGAAGGAAAAGCTTGAGAACCATATAGCACGGGCGCACGATGACGAACTTTTAGCCAATGACCAGAAAACTGAACACGATGACTCTTCTATGGACATGGATGCAGAAGAAGAAGATGATAATTCTATCAATGtaaaagAAGAAAACGGTGAAATGGTggttgaaattaaaaaagctgGTGAATACATgTTGCCTGTTGCTCAAATAGAGGAAGACAGAGGAGATAACACTCAGTCAGAAGACAGTGACATGAACTACGCGGATTCACCGGTTACAGAAATAGAAGCAATGCCAACCTCAAAACAGCAAGAGGTGGTCAAAAAGGGGGCCACCATCACCAAGATACCAGAGGCAACTGTGGTCACTCCTGTAGTCACTAAACCTGCGCAGACGATGAATGTGCAACCACCACCAAATCCTTCCCCCATATTACGTAAAGCTGAAGATGTGAAGCGTAAAGCTGCCGTGATTCAACAACAGCAACCGCCAGCCTCAGTTGCAGATAAAAAAGACAAAGTGTCAGTGAAGGTGGAACCCAGCAGCACAGCCACTGGAGCCAGCGACAAATCTCTTCGCCTGCTGGAAAAAGAGCTACAGGATCTGAAAAGGACAAACTCGCGAACCGAAGCGGCAAAGACTCCAGCTAAGTCTGTAGATATTCTAAGAAGTAGACGACCGCAGCTGTTCTCTTCTACACCAAAGCCGAGAACTGCTGACAAGAAAGAGACTGTTCCACCAAAACCAGCCACAGAAAAATTGACGGCGGAAAAGAAGCAAACAGACCGGAAGGGCAAAGATACTAAAGAACCAAAGGAGGTCAAGAGCAACAACAACACTATCAAAGAAGATAAGGAGCTCAAAGAAACCATTAAAGAAGAAAAAGGGGCCAAAGGAAATAGAGAAGATAAGGAGCCAAAAGGAAACACCAAAGAAGATAAGGTGATCAAAgaagataaaaaagaaaatcttAAGATGGTTGTAAAGAATGGTGCAACTGAGACCCTGTCTGCTTCCTCGGAGGACACAGTGCGCAGGTCCACCAGACCTTCCAAATTCAAGGACTACGCTAAAATGATCCGTGACAGTTCAATGGAATCTGATGACGACACGGATGCTGACGAAGAAGTAGAAAACTACAAAGAACCCGAAAAAACACCAGAGGTGTCCCGCGTCCGCGGTCGGCGTCCCAGCACCAAGCCCACACCGACTCCGGTCGTGAAGAGCGCTACGCCCGCTAGCAAGGTGGAGACGCCCGCCGCCGCGCCCAGGAAGCGAGGCCGCCCGCGCAAGGAACCGCGCCCTGTAGTGCCCAGTAAGATTAAGAAAGATGACCCTTCGGAAGAGGAGGCTGACACCGAGCCGACCAAAAGCCAAGCCGCGACATCGCCCAAACACGACACGCCCAAAGAGAATGAACCAAATAATCGTGCAGACGGAACCAAGACTCCGgaagGTAACAAGCTGCCTCTGGAACCTAGGCCGGGGGTTATAATCTCTCCGTCTGGGCAAACTCTCAAAAAGGTACCAATCAAAGCTCTGCCGCCAGGAGTAAAGCCTCTTCCATTGCCTGTTAACTCCAGATTGGGCGGTGGTGAAGTAACAGAGATGCAGATAGGCAAGAAGATGGTCAAGGTACAGAAGATTGTGATGACCAAAGCAGAAGTGGAGGCCATGACTAAAAAGGGACTTCTGGAAATAAAGGATGGTACGATGGTGCTAAAGCAAGGCATAAAGTTGCCAGGTACTGACCCGGCGATGCTGAAGTCGAGCCTAGTCAGGGAATGCGAGGCAAACAAAGAATCTCCAAAGCCGTTGGCGACACCGACGAGGTGCAATTTAGACGCTGATTAA
Protein Sequence: MEKRKETLSSLKLCRFCLTAEESLISLYDNKNRAPKNSVPFALKILACIAIEIFPSDNMPQFICQRCKLFMELSYAFKQLCRQADEAILQFIQNGTPLAAMPWPSQLNKVYKSVNKSAEVNVVKTVVQGGATVKVMAEEVSDSEGDEDNVYNVKIGDGSEEGKSLKIITSVDQSRSKSRQDSEEADNSEVSVVSGCWPCVDCECTYPLEQLLTLHKAQKHRARNEICDECGGRFFSKNDLEVHQLTHSPEMPFQCVACDKKFKRLILLKRHEKVMHSELPQLNCPSCPATFLSIEELEAHQLKHERHPFRPFTCFICDKSFPTKTLLQKHTAMVHNKKSAFSCQYCPEQFPSVAKLTRHVRQHAGVKPYPCKHCDKSFTKSHHYTRHLRVKHAETTRIPGPYNEFDAYRCDECEETFTTQDELMYHSALHATRNLICPLCQEKFDDVDTVTAHIKSHTNGTEFMCDFCELIFTSKEKLENHIARAHDDELLANDQKTEHDDSSMDMDAEEEDDNSINVKEENGEMVVEIKKAGEYMLPVAQIEEDRGDNTQSEDSDMNYADSPVTEIEAMPTSKQQEVVKKGATITKIPEATVVTPVVTKPAQTMNVQPPPNPSPILRKAEDVKRKAAVIQQQQPPASVADKKDKVSVKVEPSSTATGASDKSLRLLEKELQDLKRTNSRTEAAKTPAKSVDILRSRRPQLFSSTPKPRTADKKETVPPKPATEKLTAEKKQTDRKGKDTKEPKEVKSNNNTIKEDKELKETIKEEKGAKGNREDKEPKGNTKEDKVIKEDKKENLKMVVKNGATETLSASSEDTVRRSTRPSKFKDYAKMIRDSSMESDDDTDADEEVENYKEPEKTPEVSRVRGRRPSTKPTPTPVVKSATPASKVETPAAAPRKRGRPRKEPRPVVPSKIKKDDPSEEEADTEPTKSQAATSPKHDTPKENEPNNRADGTKTPEGNKLPLEPRPGVIISPSGQTLKKVPIKALPPGVKPLPLPVNSRLGGGEVTEMQIGKKMVKVQKIVMTKAEVEAMTKKGLLEIKDGTMVLKQGIKLPGTDPAMLKSSLVRECEANKESPKPLATPTRCNLDAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00826127;
90% Identity: iTF_00034050;
80% Identity: -