Basic Information

Insect: Agriopis leucophaearia
Gene Symbol: -
Assembly: GCA_949125355.1
Location: OX421264.1:16448894-16460907[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0047 0.34 12.1 2.3 2 23 207 229 206 229 0.96

2 28 0.0081 0.59 11.3 1.0 2 21 268 287 267 288 0.93

3 28 7.3e-05 0.0053 17.8 0.4 2 23 325 347 325 347 0.97

4 28 4.5 3.3e+02 2.7 0.6 2 13 380 391 379 400 0.82

5 28 0.00068 0.05 14.7 0.5 1 23 410 433 410 433 0.97

6 28 0.42 30 6.0 0.1 1 23 449 471 449 471 0.94

7 28 0.0033 0.24 12.6 0.9 2 23 514 535 513 535 0.96

8 28 0.00012 0.0086 17.1 3.4 2 23 577 599 576 599 0.97

9 28 7e-06 0.00051 21.0 1.3 1 23 649 672 649 672 0.97

10 28 0.00051 0.037 15.1 0.1 1 23 729 751 729 751 0.97

11 28 0.03 2.2 9.6 9.1 1 23 762 784 762 784 0.97

12 28 0.017 1.2 10.3 0.7 2 23 796 817 795 817 0.96

13 28 0.004 0.29 12.3 1.0 1 23 827 849 827 849 0.98

14 28 0.23 17 6.8 1.9 2 23 877 898 876 898 0.95

15 28 0.00065 0.048 14.8 3.7 1 23 909 931 909 931 0.97

16 28 4.5e-05 0.0033 18.4 0.4 1 23 939 961 939 961 0.98

17 28 0.0031 0.22 12.7 0.2 2 23 981 1003 980 1003 0.97

18 28 0.19 14 7.0 0.3 1 23 1021 1043 1021 1043 0.96

19 28 0.86 63 5.0 2.2 1 23 1050 1072 1050 1072 0.94

20 28 0.029 2.1 9.6 0.5 2 23 1083 1105 1082 1105 0.95

21 28 0.067 4.9 8.5 0.2 1 23 1127 1149 1127 1149 0.97

22 28 0.076 5.6 8.3 0.5 2 23 1230 1251 1229 1251 0.91

23 28 0.11 8.3 7.7 1.1 5 23 1261 1279 1259 1279 0.92

24 28 0.034 2.5 9.4 0.9 2 23 1290 1312 1289 1312 0.95

25 28 0.45 33 5.8 0.5 2 21 1329 1345 1329 1347 0.73

26 28 0.53 38 5.6 1.9 2 23 1420 1441 1419 1441 0.93

27 28 0.0064 0.47 11.7 0.8 2 23 1452 1474 1451 1474 0.97

28 28 0.79 58 5.1 1.2 2 20 1512 1530 1512 1532 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0047	0.34	12.1	2.3	2	23	207	229	206	229	0.96
2	28	0.0081	0.59	11.3	1.0	2	21	268	287	267	288	0.93
3	28	7.3e-05	0.0053	17.8	0.4	2	23	325	347	325	347	0.97
4	28	4.5	3.3e+02	2.7	0.6	2	13	380	391	379	400	0.82
5	28	0.00068	0.05	14.7	0.5	1	23	410	433	410	433	0.97
6	28	0.42	30	6.0	0.1	1	23	449	471	449	471	0.94
7	28	0.0033	0.24	12.6	0.9	2	23	514	535	513	535	0.96
8	28	0.00012	0.0086	17.1	3.4	2	23	577	599	576	599	0.97
9	28	7e-06	0.00051	21.0	1.3	1	23	649	672	649	672	0.97
10	28	0.00051	0.037	15.1	0.1	1	23	729	751	729	751	0.97
11	28	0.03	2.2	9.6	9.1	1	23	762	784	762	784	0.97
12	28	0.017	1.2	10.3	0.7	2	23	796	817	795	817	0.96
13	28	0.004	0.29	12.3	1.0	1	23	827	849	827	849	0.98
14	28	0.23	17	6.8	1.9	2	23	877	898	876	898	0.95
15	28	0.00065	0.048	14.8	3.7	1	23	909	931	909	931	0.97
16	28	4.5e-05	0.0033	18.4	0.4	1	23	939	961	939	961	0.98
17	28	0.0031	0.22	12.7	0.2	2	23	981	1003	980	1003	0.97
18	28	0.19	14	7.0	0.3	1	23	1021	1043	1021	1043	0.96
19	28	0.86	63	5.0	2.2	1	23	1050	1072	1050	1072	0.94
20	28	0.029	2.1	9.6	0.5	2	23	1083	1105	1082	1105	0.95
21	28	0.067	4.9	8.5	0.2	1	23	1127	1149	1127	1149	0.97
22	28	0.076	5.6	8.3	0.5	2	23	1230	1251	1229	1251	0.91
23	28	0.11	8.3	7.7	1.1	5	23	1261	1279	1259	1279	0.92
24	28	0.034	2.5	9.4	0.9	2	23	1290	1312	1289	1312	0.95
25	28	0.45	33	5.8	0.5	2	21	1329	1345	1329	1347	0.73
26	28	0.53	38	5.6	1.9	2	23	1420	1441	1419	1441	0.93
27	28	0.0064	0.47	11.7	0.8	2	23	1452	1474	1451	1474	0.97
28	28	0.79	58	5.1	1.2	2	20	1512	1530	1512	1532	0.93

Sequence Information

Coding Sequence: ATGGCCCTCAAACTCGGAAAATGCAGATTATGTCTCAAGCTCGGCGATTTCTACTCTATTTTCACGGTTGACAATGCCGTACAACTCGCGGAGATGGTTATGGATTGCGCAAGGATAAAAGTATACGAAGGAGATGGTTTACCAGATAAAGTTTGTTCGGAGTGTGTACAAAAGCTCAGCAGTGCCTACATATTCAAACAACAGTGCGAGAGAGCAGATCAAGAGTTACGACGGAACTATGTCCCTCCTCCGGGCTTCAGTATCAGTCCACCACCGCCGACTAGACAAAGTAGCGATTCGGCATTTTCAACACACACAGAAAGCTCCAATTTAAAGTCGTCTTTCATAGAAAGCAAAGTAGCACCAGTCAAAAGAAGTAGGAAGAGAAGCGCCGAAAGCGATAATGCATCTGAAGCGAGTCGGTCACAGGACTATGGCCGACCGAGTAGTTCCAAACGCGTGGAGGAACTTCGCAGAACGCAGAAAAGACCACGACTTTCCGCCAACAACAGTAACAACTCTCAGTGCGATTCCGATTACGAAGACAATGGAGGCTCCAGCTATATCCCGGAGACTGATAACGATTCTGACGAGCCGCTCATCAAGCCTCACGAAAACAAATGCGAATTCTGCAGCAAAACTTTCAGGTGGAGAAAGAGTTTAAAGGTTCACATGAAAAACGTCCATGGAAAGAAGGATAGTTTTGATGCACTTGTCACTGCCAATTCAGTCACTAACGTCAGTACACCCAAAAAGACTGCTGACACGTCAAATATGTCTTTCGACGATGACGAGAAGCTGAATTGCTCCCGATGCGACCAAACTTTCAAACTAAAGATTATGTTAAAGAGGCACTTGAAATCGTGCACTGGAAAGACGCCTATAAAGTCACCTGTAAAGTCACCACAAAAAGAGTTGTTTATTTCTTTGGAACCAATCGACGCTGTACACAAGATCACGGTAAAGAAACCTACTTGCGAATACTGCACGGCCAAATTCAAAACTGTTGATAATCTAGAGAAACATCTTAGAGTTGTGCATGCAGCTGTTTTGAAGAAAGAGATCGATGCTAAAGTAGCGAAATCTAGTCCGAAACCAAGCCTGCAGTTCAAGGAAGGCTCCAACGTGTTTACCATACCATGCGTCTACTGTCATAAGCCATTTGATGATTACTACGTCCACCAATCTCACTTCAACACATGTCCAAAAAAGGACACGCGTTTTGTTTTCGAATGCCCGATCTGCCAGAAGATGTCGAGCCGGAAAAATGGTTACTTCATCCACATAAAGAACATCCACTTCGAACCTCGAGCGTGCAAGCCCGAAGACCCGTCGGAGTCTTCCTTCGAATGTCGCATATGTAATAAGAAACTGCTCTCGCAGGAAATGCTCGTCACGCATTTGGCAGCTCATGCGTCTAATATAGACGAGGATAACGATGACACTGCACACGACGATGGCGATTCGAGACCGAGCACCTTTGAAGATTCTGCGTCCATCCACTCGGCACACAGCACGCCTGTGCCCGGTGGGCCACTCAAATGCCGCGTGTGCGAAAAAGAGTTCAAGTACCGCAAGGCGCTTATTACGCACGAGGAGAAACATACCGAGGACGAAATACGAGTGAAAAATGAACCTCCGGACAAACCCTCGATGAGTTTATTGAGTGAGACCCACCGTGAGTCTGATTTTGAATCTAGTCAAGATGACGATGAGGCGGATGACTTAACCTGCGATATTTGCGAGAAAATGTTCTCCTACAAACGCCTACTTGAACACCACAAGAGAACGAAGCACAACATGTCCTCAGGCACTAAGCGTGCGAAAATAAACCTTAAAGACTGCTCTGTAAGGTGCTTGCTCTGCGACTTGGAGATGAAAGTGAGCGCCATCAATGAGCACAATCAGAAGCATATTTCCATGAACATCAAGCCAAGGAACATTTACACTTGTGCCGAGTGTGGTCAGAAGTTTAAGAGTTGCAGTAATTTGGCTAATCACATTAAGCTAGTTCACAGGTTGAAGCATACACAAGAGCAAGTGCCGCGGCAGTTCATAGGCGCAGATCTGGCggatttttgtgaagtcgttgTGACGAAGGCGGAACCCCTGGACCCAATCCAGAGTCACAACGGCTTTGGAGAGGTTCCGTCACAGGGGGCTCCAACAGTGGACCTTAGTGGGTTCACGTGTCCCATCTGTGGCAAGAAAATGGCTACTCTCATCTCACTGAAGCGCCATGTCAACTGGCATTCGTACGTGGGGGCCAATCTAGAGAAGAAACACGAGTGCTTCGTTTGTAAAGAGACATTCAAATTCCAATGCCACTTCAAGATCCACATGCGCGAGCACTACCATGACCCGAACATCGATCCTGTCCTGCTCACTTGCTCCATCTGCGGGCGCAAGAGCAAACACCTCCGCGGAGCGCAGGCACACATGAACTGGCACAAACAAACACGTTTCCAGAACAAAGACTACCAGTGCTCCATATGCAAGCGCGTCTTTCAATACAGAAAGGTCTACTTATCCCACATGGCTATACATTACAAGAAGGGAGAGAGCGCTATGAATACTATAGTCGGTGATATGACTTGGGGGGGTAAGGCATCCCTCGATGGGACTTCAACCTGCCAGCTTTGCGGAAAGGTCTGTCTATCTGAAGTCTCGTTGAAGCATCACCTCATTTGGCACAAGTCGAAAACATTATTGTACGGAGCGAGGCACGAGTGTCAGATGTGTCAACTCCAGTTCACTAACAAGCGTCACCTCGAGCTGCACATCCGGGCTCACTACGAGGACGAGAACGGCCCGTACAAGTGCAACGTTTGCGGGAAAGGATATATCGATGAAGAGTACATGCGGCGCCACCAGAAAGGACACAATTTCGACCACTCCTCGCACAAGAAAAGGCTCGAAAAACTTCGAAAAGATAAGGTCAAGTGCCCGATTTGCTCGCGGTACTACCCAGATTTGGTGCGATTGATTCGACATTTACGGCGCACGCATCCAGAATCCAAAATGATAAAAGAGGACCCGGACGCCCCGGCTCCTTCTTATTTCTCTTGCAAGCTTTGCGCCAAAGTTTTCCTTGACGAGGCCCGACTCAAGAAGCACGAAGAAATGCACTTGCGGAAGCCGAACTTCTTCCGATGCAAATTCTGCGGCCGAAAGACGATATCTCTCAAAGCGCACAATGTGCATATTAAGGGGCATCTGACGAGAAAACACGTGGACAATCCACTGAAGTGTCCGCAATGTGAAGAAGTGTTTGTGCTAGGATACGCGTTACATCACCACCTGCGAGATGTGCACGGAGTGAACGAAACGTGGATTGCGGAGCGAGCAGACGCGCCTCTAGAAGGCCCGCTTAAAGAATTCCAGTGCgcagtttgtatgaaaatcctCGCTAGTAAAGGGAACTTCGAACGGCACCTCGACTACCACAACTCTTTGCGCTGCAACTACTGCTTCGATTACTTTGGGGGGCTGCGGTTCCTGGAGGGTCATCTTGCGTTCAGCTGTGAGAAGAAAAAGCTGATTGGAGATACGGAGGTGCATACGCGACGCATCAAGTGCGAGTTGTGCTACAAGGCCTTCCACCTGCAGGTGAAGCTGGACTGCCACTTGCGCACGCAGCACGGCGTGTCGGTGGACAGGCGCATGGGAGCCGCCTGCGCAGACACCGTCTGCGACTACTGCTTCAGAACATTCGAGAACGAGTTCGCGCTCACCGGACACAAGGTCTACCATCGCTCCGTCGGCTACTTCGGCTGCATCTACTGCCCGCGGAAATTTAACACGCGCGCCGCCTACAACAGACATAAGACCCAACACCTGTACACGCTCAACGCCGATGACCCCACTAAATGCGAGCATTGCGACGAAAAGTTCGTAGCTTTCCGCGACATGATCGATCATATGAAAGAAGAACACGGTGACGATAAGGAATGGATTATCGAACCGAAGGAGTCGATCGAGGAGAAGTGCCCGATATGTGAGAAAATGTTCTACAACCTGCCGCGCCACCTGCAGTACCACGAGGAAAATAAATGCAAGAAGTGCaatgaatacttctattcgcggctCGATTGCGACAGCCACCTGTGCGCCATCGAAAGTGACGCAGAGGAAGAAACGTTCGGCAGCGACACCCCGGCGCGAACTTACGAAGAATGCACCTTCTGCTTCAAACCGATCACCAAAAAAGACTCCAAGAAAAAACACGACATCTTGCACAGGACTTCGGGCGCAATCTCGTGTCGATTCTGTCACCTCAAGTTCAAAACTATCGACGCGTTTAACATTCACGCGTTCTCACACCGCAGCCGCAAGTACGTGAAGCGGGCGATCAAGTGCCGAGTGTGCAAGGAGCGCTTCATCAAGTATGGACCTTTCATGAAACACATGAAAACAGTGCACAAGTCTACGAAGAAGGTGCATTACCGCGCCGTGGTGAAGGCGGAGCGTTGTGTCGTGTGCGGGGAATCTCTACCGAACTTACATAACCACTACCGCGCTCATCTCACTAACCGCTGCCAGCTGTGCGCGAAATACTTCATTTCCTCGCGGCTGTTCGCGCGACACGTGTGCAACAAAGAAGACGCAGATCCATCCAAAGTGTTCACGTCTGACGCTGACCTGCCCGCGCTCATAGCCTCTTACATTCCCAAAGACGAAAAGGACGATGAAAAATTTTATGGTTACACAGACGATGAGGAAGACCCGGAGCCAGAACCGGAGGAGTTCCCTACGCAACCGAAGCCCAAGGTCCTCAAAACTTACTCGAAGCCGGCGAAGCGGCCTCAAGTCGCCGAGTTGCCGAGGGCTCAGCCTATCGACAGCCAGCTGGAGGAAGACGAGCGCAATCTACACATGATGGTGCAGTCTCCGATAATTTCAGACGTGCTCTCTCTTTATCAGAAGCAGGAGGTCGATGGGGACTCCAAGAGCCAGACGAGTCAGTTCGGCGATGTAGTCGACCTTAGCGATGATTCTCTAGATGCGATTGATCTCCACGCGCCCGCCGACGTTGTCGTCATTGACGATTCAAGTTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNAVQLAEMVMDCARIKVYEGDGLPDKVCSECVQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPTRQSSDSAFSTHTESSNLKSSFIESKVAPVKRSRKRSAESDNASEASRSQDYGRPSSSKRVEELRRTQKRPRLSANNSNNSQCDSDYEDNGGSSYIPETDNDSDEPLIKPHENKCEFCSKTFRWRKSLKVHMKNVHGKKDSFDALVTANSVTNVSTPKKTADTSNMSFDDDEKLNCSRCDQTFKLKIMLKRHLKSCTGKTPIKSPVKSPQKELFISLEPIDAVHKITVKKPTCEYCTAKFKTVDNLEKHLRVVHAAVLKKEIDAKVAKSSPKPSLQFKEGSNVFTIPCVYCHKPFDDYYVHQSHFNTCPKKDTRFVFECPICQKMSSRKNGYFIHIKNIHFEPRACKPEDPSESSFECRICNKKLLSQEMLVTHLAAHASNIDEDNDDTAHDDGDSRPSTFEDSASIHSAHSTPVPGGPLKCRVCEKEFKYRKALITHEEKHTEDEIRVKNEPPDKPSMSLLSETHRESDFESSQDDDEADDLTCDICEKMFSYKRLLEHHKRTKHNMSSGTKRAKINLKDCSVRCLLCDLEMKVSAINEHNQKHISMNIKPRNIYTCAECGQKFKSCSNLANHIKLVHRLKHTQEQVPRQFIGADLADFCEVVVTKAEPLDPIQSHNGFGEVPSQGAPTVDLSGFTCPICGKKMATLISLKRHVNWHSYVGANLEKKHECFVCKETFKFQCHFKIHMREHYHDPNIDPVLLTCSICGRKSKHLRGAQAHMNWHKQTRFQNKDYQCSICKRVFQYRKVYLSHMAIHYKKGESAMNTIVGDMTWGGKASLDGTSTCQLCGKVCLSEVSLKHHLIWHKSKTLLYGARHECQMCQLQFTNKRHLELHIRAHYEDENGPYKCNVCGKGYIDEEYMRRHQKGHNFDHSSHKKRLEKLRKDKVKCPICSRYYPDLVRLIRHLRRTHPESKMIKEDPDAPAPSYFSCKLCAKVFLDEARLKKHEEMHLRKPNFFRCKFCGRKTISLKAHNVHIKGHLTRKHVDNPLKCPQCEEVFVLGYALHHHLRDVHGVNETWIAERADAPLEGPLKEFQCAVCMKILASKGNFERHLDYHNSLRCNYCFDYFGGLRFLEGHLAFSCEKKKLIGDTEVHTRRIKCELCYKAFHLQVKLDCHLRTQHGVSVDRRMGAACADTVCDYCFRTFENEFALTGHKVYHRSVGYFGCIYCPRKFNTRAAYNRHKTQHLYTLNADDPTKCEHCDEKFVAFRDMIDHMKEEHGDDKEWIIEPKESIEEKCPICEKMFYNLPRHLQYHEENKCKKCNEYFYSRLDCDSHLCAIESDAEEETFGSDTPARTYEECTFCFKPITKKDSKKKHDILHRTSGAISCRFCHLKFKTIDAFNIHAFSHRSRKYVKRAIKCRVCKERFIKYGPFMKHMKTVHKSTKKVHYRAVVKAERCVVCGESLPNLHNHYRAHLTNRCQLCAKYFISSRLFARHVCNKEDADPSKVFTSDADLPALIASYIPKDEKDDEKFYGYTDDEEDPEPEPEEFPTQPKPKVLKTYSKPAKRPQVAELPRAQPIDSQLEEDERNLHMMVQSPIISDVLSLYQKQEVDGDSKSQTSQFGDVVDLSDDSLDAIDLHAPADVVVIDDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634735;
90% Identity: -
80% Identity: -