Aleu016602.1
Basic Information
- Insect
- Agriopis leucophaearia
- Gene Symbol
- -
- Assembly
- GCA_949125355.1
- Location
- OX421278.1:1492776-1494923[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-07 8.7e-05 22.8 0.0 2 36 16 50 15 58 0.91
Sequence Information
- Coding Sequence
- atgCCCCGCGACTATGAGAGAACGACTAATCGTCAAGCTTGGAGTCAGGAGTCAATGAAAAAAGCAATAGAGGCAGTCCGAGAAAATCGGATGGGATGGCTGGCAGCATCAAAGATGTTTGGTGTTCCACAAGCTACGCTGAGAAGACatgcattaaataaaaataaaactttgccATCTAACACAAAAGGCTTAGGAAGGTTCAAGAATACCTTTCCTCTAGAAATTGAAAGACACTTGGTTGATCATATAAAGTTTTTGGAAACTAGACTTTTTGGTTTGACGCGAACAGCAGTCCAAGAACTTGCCTTTAATTTGGCGGAGAAGAATGGTTTCAGTCACAATTTTAACAGAGAAAAGAAACGTGCTGGACAAGAATGGCTTGATGGATTCCTCAAGAGAAACCAAGACATTTCTCTTCGTACACCTGAAGCGACTTCCGCAGCCAGAGCTCAAGCTTTCAACAAACCACAGGTGTCCAAATTTTTTGAGCTCTATCAAACTCTTACTAATGCTCACAACTTTGGGCCACACCGGATTTACAATGTTGACGAATCAGGTCTCACAACAGTCCAAAAACCACAAAAGATTTTAGCGACGAAAGGCAGAAAGCAAATCGGCTCCCTAACCAGTGCTGAAAGAGGATCCAATGTCACAGTAGTGTGCTGTACAAATGCTATTGGATCATTTATCCCACCTTGCATGATATTCCCACGAAAAAACATGAAGAAGGAACTTGTGGATGAAGCTCCTACTGGCACACTAGGTCTTGCCCAAGAGTCTGGATGGATGAATACCGAGATATTTGTAAAATGGTTAAAGCTTTTCAAAGAACACACTAAATCCAGCACTGATGACCCAGTCCTTCTCATCTGCGATGGCCATGCCAGCCACAAGAGTATCGAAGCATTGACTTTTGCCAAAGAAAATGGCATTCATATGCTCTGTCTACCTCCACACTGTACTCACCGAATGCAGCCCTTAGACGTGAGTATCTATGGACCTTTAAAGACCTACTTCCATCAAGAAATATCAAAGTGGCTAAAAAACCACCCAGGCCGAGTCGTGACTCATTTTCAAATAGGACAACTATTCAACCAAGCATATGGGAAGACAGCAACAGTTCAAAATGCATGCAGTGGCTTTAAAAACACAGGCCTGTGGCCCATTAATCCAGATGTTTTCCCTGAATATATGTTCGAACCTGCAGAGACAACAAACATTCCGTTGAACCAAGAAAATGTAGCTGACAATGGGCGCAATGATGAGAACACTCCTGGAATTTCATCGGTACAACTAAATTCAACTGAAAATGGGAATATTGATGAGGACTCTACTGGAGTTCCATCAACACAAAAGGACGTAACTCGCAGTGTACATCATGTTCAGGACACTTCTGGAGCTCCATCAATCCAGGATGTAACTGATGAtgcaaatgatgatgaagatactACTGGAGCTCCATCAACCCAAGAAATTGTAACTTTCGACGAGACGTCTGTGTCTTCTGTAGAGCTTCATCTGGTAAATGTAGAAGCAGTCGCAAGTCCACTCATCCAAGGAAGTTATGGCAATGCTGCTGGGTCGAAAACTTCTACAAATGAAGATCAGCTTCCTGGAAGAGACGGAAGTGGAGCAACTGACAAAAACAGGCCCATCTTGTCAACGGATTTATATTTCCCCATTGAAGTTCTTTCTCCAGTACCTCAAGGACAATATATTCAAGGGCAAGGTAAACGAAAGCAGAAAGCTCGCAAATCTGACTGGCATTTAACTTCTACTCCCAACTTAAAAGAATTGAAAGCTAAACATTCACTAAAGAATCCATCTGAAAAGAGAAAGAGACAAGTTACAAAGACGCTTTTTGATGCTGATGAGAATCTACCAACATCTTCTAAAGGACCTGGAAAGAAAAGGAAGAGTGTGATGAAGAAACCTATTCGCGATGATAGCTCAGATGAAGATTTTCCCACTGATATCACAGACGATAAAGAAGATTGTGCGTGCATTTATTGTAATGACCTTTTTTCGCGTTCCAAGCCTCGAGAATGCTGGTTGAAGTGTACCAAGTGTTCTCTTTGGGCTCATGCGTCGTGTGCTGACGTCCCTAAGAAGACCAAAAACTTCGTTTGTGAACTGTGCCTTTGA
- Protein Sequence
- MPRDYERTTNRQAWSQESMKKAIEAVRENRMGWLAASKMFGVPQATLRRHALNKNKTLPSNTKGLGRFKNTFPLEIERHLVDHIKFLETRLFGLTRTAVQELAFNLAEKNGFSHNFNREKKRAGQEWLDGFLKRNQDISLRTPEATSAARAQAFNKPQVSKFFELYQTLTNAHNFGPHRIYNVDESGLTTVQKPQKILATKGRKQIGSLTSAERGSNVTVVCCTNAIGSFIPPCMIFPRKNMKKELVDEAPTGTLGLAQESGWMNTEIFVKWLKLFKEHTKSSTDDPVLLICDGHASHKSIEALTFAKENGIHMLCLPPHCTHRMQPLDVSIYGPLKTYFHQEISKWLKNHPGRVVTHFQIGQLFNQAYGKTATVQNACSGFKNTGLWPINPDVFPEYMFEPAETTNIPLNQENVADNGRNDENTPGISSVQLNSTENGNIDEDSTGVPSTQKDVTRSVHHVQDTSGAPSIQDVTDDANDDEDTTGAPSTQEIVTFDETSVSSVELHLVNVEAVASPLIQGSYGNAAGSKTSTNEDQLPGRDGSGATDKNRPILSTDLYFPIEVLSPVPQGQYIQGQGKRKQKARKSDWHLTSTPNLKELKAKHSLKNPSEKRKRQVTKTLFDADENLPTSSKGPGKKRKSVMKKPIRDDSSDEDFPTDITDDKEDCACIYCNDLFSRSKPRECWLKCTKCSLWAHASCADVPKKTKNFVCELCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00032857; iTF_01090701; iTF_00023677;
- 90% Identity
- iTF_00032857;
- 80% Identity
- -